RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
VPS8-225ENST00000492449 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
VPS8-225ENST00000492449 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
VPS8-225ENST00000492449 KMT2CQ8NEZ4 4911 aaKnown RBP4.87□□□□□ -1.63
VPS8-225ENST00000492449 PLAC4Q8WY50 150 aa4.87□□□□□ -1.63
VPS8-225ENST00000492449 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
VPS8-225ENST00000492449 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
VPS8-225ENST00000492449 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
VPS8-225ENST00000492449 VPS13BQ7Z7G8 4022 aa4.84□□□□□ -1.64
VPS8-225ENST00000492449 KRTAP10-2P60368 255 aa4.82□□□□□ -1.64
VPS8-225ENST00000492449 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
VPS8-225ENST00000492449 M0QZ58 72 aa4.78□□□□□ -1.64
VPS8-225ENST00000492449 PKD1P98161 4303 aa4.78□□□□□ -1.64
VPS8-225ENST00000492449 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
VPS8-225ENST00000492449 RYR3Q15413 4870 aa4.78□□□□□ -1.64
VPS8-225ENST00000492449 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
VPS8-225ENST00000492449 PKHD1P08F94 4074 aa4.71□□□□□ -1.65
VPS8-225ENST00000492449 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
VPS8-225ENST00000492449 RYR2Q92736 4967 aa4.7□□□□□ -1.66
VPS8-225ENST00000492449 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
VPS8-225ENST00000492449 FAT2Q9NYQ8 4349 aa4.66□□□□□ -1.66
VPS8-225ENST00000492449 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
VPS8-225ENST00000492449 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
VPS8-225ENST00000492449 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
VPS8-225ENST00000492449 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
VPS8-225ENST00000492449 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
VPS8-225ENST00000492449 TNXBP22105 4242 aa4.61□□□□□ -1.67
VPS8-225ENST00000492449 SMR3BP02814 79 aaPredicted RBP4.61□□□□□ -1.67
VPS8-225ENST00000492449 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
VPS8-225ENST00000492449 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
VPS8-225ENST00000492449 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
VPS8-225ENST00000492449 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
VPS8-225ENST00000492449 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
VPS8-225ENST00000492449 HSPG2P98160 4391 aa4.51□□□□□ -1.69
VPS8-225ENST00000492449 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
VPS8-225ENST00000492449 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
VPS8-225ENST00000492449 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
VPS8-225ENST00000492449 R4GN34 69 aa4.47□□□□□ -1.69
VPS8-225ENST00000492449 FAT1Q14517 4588 aa4.47□□□□□ -1.69
VPS8-225ENST00000492449 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
VPS8-225ENST00000492449 INE1O15225 51 aa4.41□□□□□ -1.7
VPS8-225ENST00000492449 LCE2BO14633 110 aa4.39□□□□□ -1.71
VPS8-225ENST00000492449 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
VPS8-225ENST00000492449 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
VPS8-225ENST00000492449 Q5VSD8 79 aa4.35□□□□□ -1.71
VPS8-225ENST00000492449 RYR1P21817 5038 aa4.35□□□□□ -1.71
VPS8-225ENST00000492449 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
VPS8-225ENST00000492449 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
VPS8-225ENST00000492449 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
VPS8-225ENST00000492449 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
VPS8-225ENST00000492449 HERC2O95714 4834 aa4.26□□□□□ -1.73
VPS8-225ENST00000492449 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
VPS8-225ENST00000492449 LPAP08519 4548 aa4.25□□□□□ -1.73
VPS8-225ENST00000492449 TNP1P09430 55 aa4.25□□□□□ -1.73
VPS8-225ENST00000492449 MT1HL1P0DM35 61 aa4.18□□□□□ -1.74
VPS8-225ENST00000492449 HERC1Q15751 4861 aa4.16□□□□□ -1.74
VPS8-225ENST00000492449 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
VPS8-225ENST00000492449 LRP2P98164 4655 aa4.11□□□□□ -1.75
VPS8-225ENST00000492449 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
VPS8-225ENST00000492449 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
VPS8-225ENST00000492449 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
VPS8-225ENST00000492449 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
VPS8-225ENST00000492449 MUC2Q02817 5179 aa3.93□□□□□ -1.78
VPS8-225ENST00000492449 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
VPS8-225ENST00000492449 RNF213Q63HN8 5207 aa3.92□□□□□ -1.78
VPS8-225ENST00000492449 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
VPS8-225ENST00000492449 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
VPS8-225ENST00000492449 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
VPS8-225ENST00000492449 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
VPS8-225ENST00000492449 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
VPS8-225ENST00000492449 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
VPS8-225ENST00000492449 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
VPS8-225ENST00000492449 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
VPS8-225ENST00000492449 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
VPS8-225ENST00000492449 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
VPS8-225ENST00000492449 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
VPS8-225ENST00000492449 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
VPS8-225ENST00000492449 M0R2T5 61 aa3.6□□□□□ -1.83
VPS8-225ENST00000492449 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
VPS8-225ENST00000492449 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
VPS8-225ENST00000492449 MT1XP80297 61 aa3.56□□□□□ -1.84
VPS8-225ENST00000492449 MT1HP80294 61 aa3.51□□□□□ -1.85
VPS8-225ENST00000492449 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
VPS8-225ENST00000492449 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
VPS8-225ENST00000492449 MT1BP07438 61 aa3.47□□□□□ -1.85
VPS8-225ENST00000492449 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
VPS8-225ENST00000492449 MT2AP02795 61 aa3.44□□□□□ -1.86
VPS8-225ENST00000492449 MT1FP04733 61 aa3.44□□□□□ -1.86
VPS8-225ENST00000492449 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
VPS8-225ENST00000492449 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
VPS8-225ENST00000492449 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
VPS8-225ENST00000492449 USH2AO75445 5202 aa3.31□□□□□ -1.88
VPS8-225ENST00000492449 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
VPS8-225ENST00000492449 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
VPS8-225ENST00000492449 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
VPS8-225ENST00000492449 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
VPS8-225ENST00000492449 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
VPS8-225ENST00000492449 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
VPS8-225ENST00000492449 MT1LQ93083 61 aa3.12□□□□□ -1.91
VPS8-225ENST00000492449 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms