RNA–Protein interactions for RNA: ENST00000491720.5

SSFA2-213, Transcript of Sperm-specific antigen 2, humanhuman

TSL 2

Gene SSFA2, Length 6,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-213ENST00000491720 KRTAP21-3Q3LHN1 58 aa3.02□□□□□ -1.93
SSFA2-213ENST00000491720 CSMD3Q7Z407 3707 aa3.01□□□□□ -1.93
SSFA2-213ENST00000491720 COL7A1Q02388 2944 aa3□□□□□ -1.93
SSFA2-213ENST00000491720 DNAH2Q9P225 4427 aa3□□□□□ -1.93
SSFA2-213ENST00000491720 MEGF8Q7Z7M0 2845 aa3□□□□□ -1.93
SSFA2-213ENST00000491720 CMYA5Q8N3K9 4069 aa2.99□□□□□ -1.93
SSFA2-213ENST00000491720 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
SSFA2-213ENST00000491720 FRAS1Q86XX4 4008 aa2.97□□□□□ -1.93
SSFA2-213ENST00000491720 FBN3Q75N90 2809 aa2.96□□□□□ -1.94
SSFA2-213ENST00000491720 LYSTQ99698 3801 aa2.95□□□□□ -1.94
SSFA2-213ENST00000491720 HECTD4Q9Y4D8 3996 aa2.95□□□□□ -1.94
SSFA2-213ENST00000491720 KRTAP10-4P60372 401 aaPredicted RBP2.93□□□□□ -1.94
SSFA2-213ENST00000491720 STARD9Q9P2P6 4700 aa2.91□□□□□ -1.94
SSFA2-213ENST00000491720 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
SSFA2-213ENST00000491720 DNAH5Q8TE73 4624 aa2.9□□□□□ -1.95
SSFA2-213ENST00000491720 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
SSFA2-213ENST00000491720 KRTAP23-1A1A580 65 aa2.88□□□□□ -1.95
SSFA2-213ENST00000491720 INE1O15225 51 aa2.88□□□□□ -1.95
SSFA2-213ENST00000491720 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
SSFA2-213ENST00000491720 DNAH7Q8WXX0 4024 aa2.87□□□□□ -1.95
SSFA2-213ENST00000491720 DNAH6Q9C0G6 4158 aa2.85□□□□□ -1.95
SSFA2-213ENST00000491720 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.95
SSFA2-213ENST00000491720 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
SSFA2-213ENST00000491720 KMT2AQ03164 3969 aa2.81□□□□□ -1.96
SSFA2-213ENST00000491720 LORP23490 312 aaPredicted RBP2.79□□□□□ -1.96
SSFA2-213ENST00000491720 PKHD1L1Q86WI1 4243 aa2.76□□□□□ -1.97
SSFA2-213ENST00000491720 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
SSFA2-213ENST00000491720 DYNC1H1Q14204 4646 aaKnown RBP2.75□□□□□ -1.97
SSFA2-213ENST00000491720 MT1HL1P0DM35 61 aa2.75□□□□□ -1.97
SSFA2-213ENST00000491720 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SSFA2-213ENST00000491720 FAT3Q8TDW7 4589 aa2.74□□□□□ -1.97
SSFA2-213ENST00000491720 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
SSFA2-213ENST00000491720 PKD1P98161 4303 aa2.7□□□□□ -1.98
SSFA2-213ENST00000491720 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
SSFA2-213ENST00000491720 FAT1Q14517 4588 aa2.7□□□□□ -1.98
SSFA2-213ENST00000491720 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
SSFA2-213ENST00000491720 KRTAP17-1Q9BYP8 105 aa2.69□□□□□ -1.98
SSFA2-213ENST00000491720 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
SSFA2-213ENST00000491720 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SSFA2-213ENST00000491720 HYDINQ4G0P3 5121 aa2.62□□□□□ -1.99
SSFA2-213ENST00000491720 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
SSFA2-213ENST00000491720 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
SSFA2-213ENST00000491720 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
SSFA2-213ENST00000491720 TNXBP22105 4242 aa2.59□□□□□ -1.99
SSFA2-213ENST00000491720 HSPG2P98160 4391 aa2.57□□□□□ -2
SSFA2-213ENST00000491720 KRTAP12-3P60328 96 aa2.56□□□□□ -2
SSFA2-213ENST00000491720 KRTAP4-1Q9BYQ7 146 aa2.56□□□□□ -2
SSFA2-213ENST00000491720 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
SSFA2-213ENST00000491720 DNHD1Q96M86 4753 aa2.55□□□□□ -2
SSFA2-213ENST00000491720 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
SSFA2-213ENST00000491720 RYR2Q92736 4967 aa2.48□□□□□ -2.01
SSFA2-213ENST00000491720 RYR1P21817 5038 aa2.48□□□□□ -2.01
SSFA2-213ENST00000491720 LCE2DQ5TA82 110 aaPredicted RBP2.47□□□□□ -2.01
SSFA2-213ENST00000491720 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
SSFA2-213ENST00000491720 LRP2P98164 4655 aa2.44□□□□□ -2.02
SSFA2-213ENST00000491720 HERC1Q15751 4861 aa2.44□□□□□ -2.02
SSFA2-213ENST00000491720 KRTAP4-5Q9BYR2 181 aa2.43□□□□□ -2.02
SSFA2-213ENST00000491720 KRTAP19-2Q3LHN2 52 aa2.42□□□□□ -2.02
SSFA2-213ENST00000491720 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.02
SSFA2-213ENST00000491720 RYR3Q15413 4870 aa2.39□□□□□ -2.03
SSFA2-213ENST00000491720 LPAP08519 4548 aa2.38□□□□□ -2.03
SSFA2-213ENST00000491720 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
SSFA2-213ENST00000491720 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
SSFA2-213ENST00000491720 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
SSFA2-213ENST00000491720 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
SSFA2-213ENST00000491720 MT2AP02795 61 aa2.34□□□□□ -2.03
SSFA2-213ENST00000491720 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
SSFA2-213ENST00000491720 MT1FP04733 61 aa2.33□□□□□ -2.04
SSFA2-213ENST00000491720 MT1HP80294 61 aa2.32□□□□□ -2.04
SSFA2-213ENST00000491720 MT1XP80297 61 aa2.32□□□□□ -2.04
SSFA2-213ENST00000491720 SPRR2EP22531 72 aa2.32□□□□□ -2.04
SSFA2-213ENST00000491720 SPRR2BP35325 72 aa2.32□□□□□ -2.04
SSFA2-213ENST00000491720 SPRR2AP35326 72 aa2.32□□□□□ -2.04
SSFA2-213ENST00000491720 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
SSFA2-213ENST00000491720 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
SSFA2-213ENST00000491720 LCE2CQ5TA81 110 aa2.29□□□□□ -2.04
SSFA2-213ENST00000491720 KRTAP19-4Q3LI73 84 aa2.28□□□□□ -2.04
SSFA2-213ENST00000491720 LCE2BO14633 110 aa2.28□□□□□ -2.04
SSFA2-213ENST00000491720 MT1BP07438 61 aa2.27□□□□□ -2.05
SSFA2-213ENST00000491720 SPRR2DP22532 72 aa2.26□□□□□ -2.05
SSFA2-213ENST00000491720 MT3P25713 68 aa2.26□□□□□ -2.05
SSFA2-213ENST00000491720 HERC2O95714 4834 aa2.22□□□□□ -2.05
SSFA2-213ENST00000491720 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.06
SSFA2-213ENST00000491720 ABCA13Q86UQ4 5058 aa2.21□□□□□ -2.06
SSFA2-213ENST00000491720 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
SSFA2-213ENST00000491720 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
SSFA2-213ENST00000491720 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
SSFA2-213ENST00000491720 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
SSFA2-213ENST00000491720 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
SSFA2-213ENST00000491720 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
SSFA2-213ENST00000491720 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
SSFA2-213ENST00000491720 LCE2AQ5TA79 106 aaPredicted RBP2.1□□□□□ -2.07
SSFA2-213ENST00000491720 LOC100996750A0A140TA64 210 aa2.09□□□□□ -2.07
SSFA2-213ENST00000491720 KRTAP9-6A8MVA2 160 aa2.09□□□□□ -2.07
SSFA2-213ENST00000491720 KRTAP4-6Q9BYQ5 205 aa2.09□□□□□ -2.07
SSFA2-213ENST00000491720 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
SSFA2-213ENST00000491720 HMCN2Q8NDA2 5059 aa2.08□□□□□ -2.08
SSFA2-213ENST00000491720 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
SSFA2-213ENST00000491720 KRTAP4-8A0A0G2JLE6 195 aa2.07□□□□□ -2.08
SSFA2-213ENST00000491720 KRTAP4-8Q9BYQ9 185 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms