RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 MT1HP80294 61 aa6.86□□□□□ -1.31
NUP188-208ENST00000491502 COA5Q86WW8 74 aa6.86□□□□□ -1.31
NUP188-208ENST00000491502 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
NUP188-208ENST00000491502 SPTSSBQ8NFR3 76 aa6.83□□□□□ -1.32
NUP188-208ENST00000491502 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
NUP188-208ENST00000491502 M0R2T5 61 aa6.79□□□□□ -1.32
NUP188-208ENST00000491502 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
NUP188-208ENST00000491502 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
NUP188-208ENST00000491502 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
NUP188-208ENST00000491502 S4R3F8 94 aa6.74□□□□□ -1.33
NUP188-208ENST00000491502 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
NUP188-208ENST00000491502 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
NUP188-208ENST00000491502 V9GYY9 64 aa6.72□□□□□ -1.33
NUP188-208ENST00000491502 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.34
NUP188-208ENST00000491502 LCA10Q71F78 164 aa6.64□□□□□ -1.35
NUP188-208ENST00000491502 Q1T7F1 81 aa6.63□□□□□ -1.35
NUP188-208ENST00000491502 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
NUP188-208ENST00000491502 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
NUP188-208ENST00000491502 SEC61GP60059 68 aa6.62□□□□□ -1.35
NUP188-208ENST00000491502 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
NUP188-208ENST00000491502 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
NUP188-208ENST00000491502 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
NUP188-208ENST00000491502 A0A1B0GU69 56 aa6.55□□□□□ -1.36
NUP188-208ENST00000491502 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
NUP188-208ENST00000491502 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
NUP188-208ENST00000491502 H0YAA0 97 aa6.46□□□□□ -1.38
NUP188-208ENST00000491502 PSPHP1O15172 72 aa6.46□□□□□ -1.38
NUP188-208ENST00000491502 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
NUP188-208ENST00000491502 MT2AP02795 61 aa6.42□□□□□ -1.38
NUP188-208ENST00000491502 Q5VV11 94 aa6.39□□□□□ -1.39
NUP188-208ENST00000491502 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
NUP188-208ENST00000491502 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
NUP188-208ENST00000491502 UQCR11O14957 56 aa6.36□□□□□ -1.39
NUP188-208ENST00000491502 A0A1B0GU33 70 aa6.35□□□□□ -1.39
NUP188-208ENST00000491502 MT1FP04733 61 aa6.35□□□□□ -1.39
NUP188-208ENST00000491502 A6NED7 52 aa6.34□□□□□ -1.39
NUP188-208ENST00000491502 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
NUP188-208ENST00000491502 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
NUP188-208ENST00000491502 P0C880 135 aa6.28□□□□□ -1.4
NUP188-208ENST00000491502 M0QZ58 72 aa6.27□□□□□ -1.41
NUP188-208ENST00000491502 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
NUP188-208ENST00000491502 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
NUP188-208ENST00000491502 LCE2BO14633 110 aa6.24□□□□□ -1.41
NUP188-208ENST00000491502 R4GN34 69 aa6.23□□□□□ -1.41
NUP188-208ENST00000491502 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
NUP188-208ENST00000491502 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
NUP188-208ENST00000491502 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
NUP188-208ENST00000491502 USH2AO75445 5202 aa6.19□□□□□ -1.42
NUP188-208ENST00000491502 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
NUP188-208ENST00000491502 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
NUP188-208ENST00000491502 K7ERS5 55 aa6.11□□□□□ -1.43
NUP188-208ENST00000491502 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
NUP188-208ENST00000491502 A0A0D9SG42 100 aa6.06□□□□□ -1.44
NUP188-208ENST00000491502 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
NUP188-208ENST00000491502 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
NUP188-208ENST00000491502 PRO0628Q9UI54 55 aa6.05□□□□□ -1.44
NUP188-208ENST00000491502 A8MU10 97 aa6.04□□□□□ -1.44
NUP188-208ENST00000491502 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
NUP188-208ENST00000491502 A6NN06 94 aa6.02□□□□□ -1.45
NUP188-208ENST00000491502 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
NUP188-208ENST00000491502 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
NUP188-208ENST00000491502 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
NUP188-208ENST00000491502 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
NUP188-208ENST00000491502 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
NUP188-208ENST00000491502 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
NUP188-208ENST00000491502 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
NUP188-208ENST00000491502 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
NUP188-208ENST00000491502 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
NUP188-208ENST00000491502 MT1BP07438 61 aa5.85□□□□□ -1.47
NUP188-208ENST00000491502 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
NUP188-208ENST00000491502 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
NUP188-208ENST00000491502 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
NUP188-208ENST00000491502 ROMO1P60602 79 aa5.73□□□□□ -1.49
NUP188-208ENST00000491502 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
NUP188-208ENST00000491502 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
NUP188-208ENST00000491502 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
NUP188-208ENST00000491502 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
NUP188-208ENST00000491502 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
NUP188-208ENST00000491502 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
NUP188-208ENST00000491502 TNP1P09430 55 aa5.56□□□□□ -1.52
NUP188-208ENST00000491502 MT1XP80297 61 aa5.54□□□□□ -1.52
NUP188-208ENST00000491502 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
NUP188-208ENST00000491502 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
NUP188-208ENST00000491502 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
NUP188-208ENST00000491502 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
NUP188-208ENST00000491502 NEBP20929 6669 aa5.37□□□□□ -1.55
NUP188-208ENST00000491502 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
NUP188-208ENST00000491502 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
NUP188-208ENST00000491502 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
NUP188-208ENST00000491502 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
NUP188-208ENST00000491502 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
NUP188-208ENST00000491502 KMT2DO14686 5537 aa5.3□□□□□ -1.56
NUP188-208ENST00000491502 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
NUP188-208ENST00000491502 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
NUP188-208ENST00000491502 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
NUP188-208ENST00000491502 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
NUP188-208ENST00000491502 SPRR2EP22531 72 aa5.22□□□□□ -1.57
NUP188-208ENST00000491502 SPRR2BP35325 72 aa5.22□□□□□ -1.57
NUP188-208ENST00000491502 SPRR2AP35326 72 aa5.22□□□□□ -1.57
NUP188-208ENST00000491502 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms