RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
HMGN1-219ENST00000491183 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
HMGN1-219ENST00000491183 ATP5EP2Q5VTU8 51 aa7.95□□□□□ -1.14
HMGN1-219ENST00000491183 UQCRQO14949 82 aa7.94□□□□□ -1.14
HMGN1-219ENST00000491183 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
HMGN1-219ENST00000491183 H0Y9P7 68 aa7.92□□□□□ -1.14
HMGN1-219ENST00000491183 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
HMGN1-219ENST00000491183 ATOX1O00244 68 aa7.88□□□□□ -1.15
HMGN1-219ENST00000491183 IMUPQ9GZP8 106 aa7.87□□□□□ -1.15
HMGN1-219ENST00000491183 NDUFC1O43677 76 aa7.85□□□□□ -1.15
HMGN1-219ENST00000491183 LINC00643Q86TS7 51 aa7.83□□□□□ -1.16
HMGN1-219ENST00000491183 H0YAA0 97 aa7.82□□□□□ -1.16
HMGN1-219ENST00000491183 LINC00208Q96KT6 92 aa7.79□□□□□ -1.16
HMGN1-219ENST00000491183 A8MUN3 132 aa7.78□□□□□ -1.16
HMGN1-219ENST00000491183 OCR1Q9BZK8 76 aa7.75□□□□□ -1.17
HMGN1-219ENST00000491183 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
HMGN1-219ENST00000491183 NEBP20929 6669 aa7.72□□□□□ -1.17
HMGN1-219ENST00000491183 MUC12Q9UKN1 5478 aa7.72□□□□□ -1.17
HMGN1-219ENST00000491183 A0A1B0GV90 55 aa7.69□□□□□ -1.18
HMGN1-219ENST00000491183 KRTAP5-9P26371 169 aa7.69□□□□□ -1.18
HMGN1-219ENST00000491183 MP68P56378 58 aa7.69□□□□□ -1.18
HMGN1-219ENST00000491183 H3BPC8 53 aa7.58□□□□□ -1.2
HMGN1-219ENST00000491183 P0C880 135 aa7.58□□□□□ -1.2
HMGN1-219ENST00000491183 MT1XP80297 61 aa7.58□□□□□ -1.2
HMGN1-219ENST00000491183 KMT2DO14686 5537 aa7.56□□□□□ -1.2
HMGN1-219ENST00000491183 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
HMGN1-219ENST00000491183 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
HMGN1-219ENST00000491183 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
HMGN1-219ENST00000491183 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
HMGN1-219ENST00000491183 R4GN34 69 aa7.52□□□□□ -1.21
HMGN1-219ENST00000491183 J3QR89 54 aa7.51□□□□□ -1.21
HMGN1-219ENST00000491183 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
HMGN1-219ENST00000491183 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
HMGN1-219ENST00000491183 MDN1Q9NU22 5596 aa7.47□□□□□ -1.21
HMGN1-219ENST00000491183 M0QZ58 72 aa7.47□□□□□ -1.21
HMGN1-219ENST00000491183 SPRR2FQ96RM1 72 aa7.42□□□□□ -1.22
HMGN1-219ENST00000491183 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
HMGN1-219ENST00000491183 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
HMGN1-219ENST00000491183 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
HMGN1-219ENST00000491183 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
HMGN1-219ENST00000491183 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
HMGN1-219ENST00000491183 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
HMGN1-219ENST00000491183 ACYP2P14621 99 aa7.34□□□□□ -1.23
HMGN1-219ENST00000491183 SPRR2EP22531 72 aa7.34□□□□□ -1.23
HMGN1-219ENST00000491183 SPRR2BP35325 72 aa7.34□□□□□ -1.23
HMGN1-219ENST00000491183 SPRR2AP35326 72 aa7.34□□□□□ -1.23
HMGN1-219ENST00000491183 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
HMGN1-219ENST00000491183 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
HMGN1-219ENST00000491183 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
HMGN1-219ENST00000491183 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
HMGN1-219ENST00000491183 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
HMGN1-219ENST00000491183 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
HMGN1-219ENST00000491183 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
HMGN1-219ENST00000491183 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
HMGN1-219ENST00000491183 SPTSSBQ8NFR3 76 aa7.23□□□□□ -1.25
HMGN1-219ENST00000491183 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
HMGN1-219ENST00000491183 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
HMGN1-219ENST00000491183 K7ERU9 68 aa7.18□□□□□ -1.26
HMGN1-219ENST00000491183 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
HMGN1-219ENST00000491183 SPRR2DP22532 72 aa7.08□□□□□ -1.28
HMGN1-219ENST00000491183 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
HMGN1-219ENST00000491183 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
HMGN1-219ENST00000491183 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
HMGN1-219ENST00000491183 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
HMGN1-219ENST00000491183 SERP2Q8N6R1 65 aa7□□□□□ -1.29
HMGN1-219ENST00000491183 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
HMGN1-219ENST00000491183 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.3
HMGN1-219ENST00000491183 COA5Q86WW8 74 aa6.89□□□□□ -1.31
HMGN1-219ENST00000491183 KRTAP19-7Q3SYF9 63 aa6.79□□□□□ -1.32
HMGN1-219ENST00000491183 A0A0D9SG42 100 aa6.78□□□□□ -1.32
HMGN1-219ENST00000491183 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
HMGN1-219ENST00000491183 SEC61GP60059 68 aa6.77□□□□□ -1.33
HMGN1-219ENST00000491183 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
HMGN1-219ENST00000491183 COX7CP15954 63 aa6.76□□□□□ -1.33
HMGN1-219ENST00000491183 A0A1B0GU33 70 aa6.72□□□□□ -1.33
HMGN1-219ENST00000491183 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
HMGN1-219ENST00000491183 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
HMGN1-219ENST00000491183 MT1EP04732 61 aa6.71□□□□□ -1.34
HMGN1-219ENST00000491183 H7BZZ5 65 aa6.7□□□□□ -1.34
HMGN1-219ENST00000491183 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
HMGN1-219ENST00000491183 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
HMGN1-219ENST00000491183 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
HMGN1-219ENST00000491183 H3BS24 57 aa6.65□□□□□ -1.34
HMGN1-219ENST00000491183 KRTAP4-12Q9BQ66 201 aa6.64□□□□□ -1.35
HMGN1-219ENST00000491183 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
HMGN1-219ENST00000491183 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
HMGN1-219ENST00000491183 A0A1B0GU69 56 aa6.53□□□□□ -1.36
HMGN1-219ENST00000491183 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
HMGN1-219ENST00000491183 A8MU10 97 aa6.5□□□□□ -1.37
HMGN1-219ENST00000491183 MT1GP13640 62 aa6.5□□□□□ -1.37
HMGN1-219ENST00000491183 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
HMGN1-219ENST00000491183 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
HMGN1-219ENST00000491183 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
HMGN1-219ENST00000491183 MT1MQ8N339 61 aa6.4□□□□□ -1.38
HMGN1-219ENST00000491183 MT1LQ93083 61 aa6.4□□□□□ -1.38
HMGN1-219ENST00000491183 C10orf95Q9H7T3 257 aa6.4□□□□□ -1.38
HMGN1-219ENST00000491183 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
HMGN1-219ENST00000491183 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
HMGN1-219ENST00000491183 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
HMGN1-219ENST00000491183 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms