RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 A0A0B4J2C4 111 aa3.83□□□□□ -1.8
USP39-216ENST00000490193 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
USP39-216ENST00000490193 HIGD1BQ9P298 99 aa3.82□□□□□ -1.8
USP39-216ENST00000490193 PSPHP1O15172 72 aa3.81□□□□□ -1.8
USP39-216ENST00000490193 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
USP39-216ENST00000490193 CCKP06307 115 aa3.8□□□□□ -1.8
USP39-216ENST00000490193 SERP2Q8N6R1 65 aa3.8□□□□□ -1.8
USP39-216ENST00000490193 H3BQ85 93 aa3.79□□□□□ -1.8
USP39-216ENST00000490193 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
USP39-216ENST00000490193 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
USP39-216ENST00000490193 A6NN06 94 aa3.78□□□□□ -1.8
USP39-216ENST00000490193 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
USP39-216ENST00000490193 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
USP39-216ENST00000490193 ATP5EP56381 51 aaPredicted RBP3.78□□□□□ -1.8
USP39-216ENST00000490193 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
USP39-216ENST00000490193 C7orf65Q6ZTY9 151 aa3.78□□□□□ -1.8
USP39-216ENST00000490193 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
USP39-216ENST00000490193 KMT2DO14686 5537 aa3.78□□□□□ -1.81
USP39-216ENST00000490193 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
USP39-216ENST00000490193 H1FX-AS1Q4G0G2 97 aa3.77□□□□□ -1.81
USP39-216ENST00000490193 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
USP39-216ENST00000490193 DNAL4O96015 105 aa3.76□□□□□ -1.81
USP39-216ENST00000490193 CXCL6P80162 114 aa3.76□□□□□ -1.81
USP39-216ENST00000490193 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
USP39-216ENST00000490193 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
USP39-216ENST00000490193 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
USP39-216ENST00000490193 MT1BP07438 61 aa3.74□□□□□ -1.81
USP39-216ENST00000490193 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
USP39-216ENST00000490193 ACYP1P07311 99 aa3.73□□□□□ -1.81
USP39-216ENST00000490193 FXYD2P54710 66 aa3.73□□□□□ -1.81
USP39-216ENST00000490193 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
USP39-216ENST00000490193 C8orf17Q9NRJ1 99 aa3.73□□□□□ -1.81
USP39-216ENST00000490193 IGKV3D-7A0A0C4DH55 119 aa3.72□□□□□ -1.81
USP39-216ENST00000490193 NDUFB1O75438 58 aa3.72□□□□□ -1.81
USP39-216ENST00000490193 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
USP39-216ENST00000490193 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
USP39-216ENST00000490193 Q5VV11 94 aa3.71□□□□□ -1.82
USP39-216ENST00000490193 Q6ZQT0 140 aa3.7□□□□□ -1.82
USP39-216ENST00000490193 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
USP39-216ENST00000490193 H7BZZ5 65 aa3.67□□□□□ -1.82
USP39-216ENST00000490193 COX6CP09669 75 aa3.67□□□□□ -1.82
USP39-216ENST00000490193 Q1T7F1 81 aa3.67□□□□□ -1.82
USP39-216ENST00000490193 A0A1B0GW54 56 aa3.66□□□□□ -1.82
USP39-216ENST00000490193 NDUFC1O43677 76 aa3.66□□□□□ -1.82
USP39-216ENST00000490193 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
USP39-216ENST00000490193 MRPL34Q9BQ48 92 aaKnown RBP3.65□□□□□ -1.83
USP39-216ENST00000490193 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
USP39-216ENST00000490193 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
USP39-216ENST00000490193 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
USP39-216ENST00000490193 IGKV2-30P06310 120 aa3.62□□□□□ -1.83
USP39-216ENST00000490193 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
USP39-216ENST00000490193 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
USP39-216ENST00000490193 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
USP39-216ENST00000490193 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
USP39-216ENST00000490193 LOC110117498A0A087WWA1 95 aa3.6□□□□□ -1.83
USP39-216ENST00000490193 hDV103S1A0JD37 113 aa3.6□□□□□ -1.83
USP39-216ENST00000490193 BAALC-AS2P0C853 105 aa3.6□□□□□ -1.83
USP39-216ENST00000490193 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
USP39-216ENST00000490193 JMJD7-PLA2G4BH0Y9G9 81 aa3.59□□□□□ -1.83
USP39-216ENST00000490193 SPRR2EP22531 72 aa3.59□□□□□ -1.83
USP39-216ENST00000490193 SPRR2BP35325 72 aa3.59□□□□□ -1.83
USP39-216ENST00000490193 SPRR2AP35326 72 aa3.59□□□□□ -1.83
USP39-216ENST00000490193 Q5W150 140 aa3.59□□□□□ -1.83
USP39-216ENST00000490193 PDE6GP18545 87 aa3.58□□□□□ -1.84
USP39-216ENST00000490193 SPTSSBQ8NFR3 76 aa3.58□□□□□ -1.84
USP39-216ENST00000490193 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
USP39-216ENST00000490193 CSAG1Q6PB30 78 aa3.57□□□□□ -1.84
USP39-216ENST00000490193 HCG22E2RYF7 251 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 K7EQZ3 153 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 NREPQ16612 68 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 S4R3F8 94 aa3.56□□□□□ -1.84
USP39-216ENST00000490193 ADM2Q7Z4H4 148 aa3.55□□□□□ -1.84
USP39-216ENST00000490193 TRAV22A0A0B4J277 110 aa3.54□□□□□ -1.84
USP39-216ENST00000490193 CYP4F30PQ9H0H9 118 aa3.54□□□□□ -1.84
USP39-216ENST00000490193 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
USP39-216ENST00000490193 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
USP39-216ENST00000490193 A8MU10 97 aa3.52□□□□□ -1.85
USP39-216ENST00000490193 C14orf132Q9NPU4 83 aa3.52□□□□□ -1.85
USP39-216ENST00000490193 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
USP39-216ENST00000490193 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
USP39-216ENST00000490193 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
USP39-216ENST00000490193 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
USP39-216ENST00000490193 C1orf64Q8NEQ6 169 aa3.49□□□□□ -1.85
USP39-216ENST00000490193 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
USP39-216ENST00000490193 A0A087WVE0 104 aa3.48□□□□□ -1.85
USP39-216ENST00000490193 BPY2O14599 106 aa3.48□□□□□ -1.85
USP39-216ENST00000490193 A6NED7 52 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 SPRR2DP22532 72 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
USP39-216ENST00000490193 ROMO1P60602 79 aa3.46□□□□□ -1.86
USP39-216ENST00000490193 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
USP39-216ENST00000490193 MT1XP80297 61 aa3.45□□□□□ -1.86
USP39-216ENST00000490193 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
USP39-216ENST00000490193 Q8N9L7 120 aa3.44□□□□□ -1.86
USP39-216ENST00000490193 K7ERS5 55 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms