RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
ABCF3-217ENST00000489719 NDUFC1O43677 76 aa8.02□□□□□ -1.13
ABCF3-217ENST00000489719 Q5VV11 94 aa8.02□□□□□ -1.13
ABCF3-217ENST00000489719 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
ABCF3-217ENST00000489719 MP68P56378 58 aa8.01□□□□□ -1.13
ABCF3-217ENST00000489719 IMUPQ9GZP8 106 aa8□□□□□ -1.13
ABCF3-217ENST00000489719 J3QR89 54 aa7.99□□□□□ -1.13
ABCF3-217ENST00000489719 A8MUN3 132 aa7.98□□□□□ -1.13
ABCF3-217ENST00000489719 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
ABCF3-217ENST00000489719 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
ABCF3-217ENST00000489719 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
ABCF3-217ENST00000489719 MT1BP07438 61 aa7.95□□□□□ -1.14
ABCF3-217ENST00000489719 A6NN06 94 aa7.94□□□□□ -1.14
ABCF3-217ENST00000489719 SYNE2Q8WXH0 6885 aaKnown RBP7.94□□□□□ -1.14
ABCF3-217ENST00000489719 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
ABCF3-217ENST00000489719 H0YAA0 97 aa7.88□□□□□ -1.15
ABCF3-217ENST00000489719 H3BPC8 53 aa7.87□□□□□ -1.15
ABCF3-217ENST00000489719 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
ABCF3-217ENST00000489719 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
ABCF3-217ENST00000489719 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
ABCF3-217ENST00000489719 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
ABCF3-217ENST00000489719 C20orf197Q8N268 126 aa7.68□□□□□ -1.18
ABCF3-217ENST00000489719 K7ERU9 68 aa7.67□□□□□ -1.18
ABCF3-217ENST00000489719 MT-ATP8P03928 68 aa7.65□□□□□ -1.18
ABCF3-217ENST00000489719 SMIM20Q8N5G0 67 aa7.65□□□□□ -1.18
ABCF3-217ENST00000489719 R4GN34 69 aa7.65□□□□□ -1.18
ABCF3-217ENST00000489719 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
ABCF3-217ENST00000489719 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
ABCF3-217ENST00000489719 P0C880 135 aa7.62□□□□□ -1.19
ABCF3-217ENST00000489719 ACYP2P14621 99 aa7.61□□□□□ -1.19
ABCF3-217ENST00000489719 M0QZ58 72 aa7.57□□□□□ -1.2
ABCF3-217ENST00000489719 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
ABCF3-217ENST00000489719 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
ABCF3-217ENST00000489719 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
ABCF3-217ENST00000489719 CHKB-CPT1BH3BT56 60 aa7.48□□□□□ -1.21
ABCF3-217ENST00000489719 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
ABCF3-217ENST00000489719 MT1XP80297 61 aa7.47□□□□□ -1.21
ABCF3-217ENST00000489719 MUC12Q9UKN1 5478 aa7.46□□□□□ -1.21
ABCF3-217ENST00000489719 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
ABCF3-217ENST00000489719 SNURFQ9Y675 71 aa7.46□□□□□ -1.22
ABCF3-217ENST00000489719 NEBP20929 6669 aa7.45□□□□□ -1.22
ABCF3-217ENST00000489719 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
ABCF3-217ENST00000489719 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
ABCF3-217ENST00000489719 KMT2DO14686 5537 aa7.36□□□□□ -1.23
ABCF3-217ENST00000489719 MDN1Q9NU22 5596 aa7.3□□□□□ -1.24
ABCF3-217ENST00000489719 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
ABCF3-217ENST00000489719 SPRR2FQ96RM1 72 aa7.29□□□□□ -1.24
ABCF3-217ENST00000489719 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
ABCF3-217ENST00000489719 KRTAP20-1Q3LI63 56 aa7.26□□□□□ -1.25
ABCF3-217ENST00000489719 SPRR2EP22531 72 aa7.18□□□□□ -1.26
ABCF3-217ENST00000489719 SPRR2BP35325 72 aa7.18□□□□□ -1.26
ABCF3-217ENST00000489719 SPRR2AP35326 72 aa7.18□□□□□ -1.26
ABCF3-217ENST00000489719 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
ABCF3-217ENST00000489719 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
ABCF3-217ENST00000489719 COA5Q86WW8 74 aa7.15□□□□□ -1.26
ABCF3-217ENST00000489719 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
ABCF3-217ENST00000489719 COX7CP15954 63 aa7.13□□□□□ -1.27
ABCF3-217ENST00000489719 SEC61GP60059 68 aa7.11□□□□□ -1.27
ABCF3-217ENST00000489719 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
ABCF3-217ENST00000489719 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
ABCF3-217ENST00000489719 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
ABCF3-217ENST00000489719 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
ABCF3-217ENST00000489719 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
ABCF3-217ENST00000489719 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
ABCF3-217ENST00000489719 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
ABCF3-217ENST00000489719 H7BZZ5 65 aa7□□□□□ -1.29
ABCF3-217ENST00000489719 A0A0D9SG42 100 aa6.95□□□□□ -1.3
ABCF3-217ENST00000489719 A0A1B0GU33 70 aa6.95□□□□□ -1.3
ABCF3-217ENST00000489719 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
ABCF3-217ENST00000489719 SPRR2DP22532 72 aa6.94□□□□□ -1.3
ABCF3-217ENST00000489719 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
ABCF3-217ENST00000489719 ANAPC13Q9BS18 74 aa6.89□□□□□ -1.31
ABCF3-217ENST00000489719 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
ABCF3-217ENST00000489719 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
ABCF3-217ENST00000489719 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
ABCF3-217ENST00000489719 A0A1B0GU69 56 aa6.83□□□□□ -1.32
ABCF3-217ENST00000489719 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
ABCF3-217ENST00000489719 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
ABCF3-217ENST00000489719 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
ABCF3-217ENST00000489719 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
ABCF3-217ENST00000489719 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
ABCF3-217ENST00000489719 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
ABCF3-217ENST00000489719 A8MU10 97 aa6.65□□□□□ -1.34
ABCF3-217ENST00000489719 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
ABCF3-217ENST00000489719 MT1EP04732 61 aa6.62□□□□□ -1.35
ABCF3-217ENST00000489719 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
ABCF3-217ENST00000489719 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
ABCF3-217ENST00000489719 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
ABCF3-217ENST00000489719 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
ABCF3-217ENST00000489719 TNP1P09430 55 aa6.5□□□□□ -1.37
ABCF3-217ENST00000489719 TMEM258P61165 79 aa6.48□□□□□ -1.37
ABCF3-217ENST00000489719 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
ABCF3-217ENST00000489719 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
ABCF3-217ENST00000489719 MT1GP13640 62 aa6.46□□□□□ -1.38
ABCF3-217ENST00000489719 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
ABCF3-217ENST00000489719 UQCR11O14957 56 aa6.41□□□□□ -1.38
ABCF3-217ENST00000489719 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
ABCF3-217ENST00000489719 MT1LQ93083 61 aa6.33□□□□□ -1.4
ABCF3-217ENST00000489719 MT1MQ8N339 61 aa6.3□□□□□ -1.4
ABCF3-217ENST00000489719 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms