RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
MDC1-206ENST00000489540 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
MDC1-206ENST00000489540 H7BZZ5 65 aa8.29□□□□□ -1.08
MDC1-206ENST00000489540 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
MDC1-206ENST00000489540 LOC101927531A0A1B0GV80 90 aa8.28□□□□□ -1.08
MDC1-206ENST00000489540 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
MDC1-206ENST00000489540 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
MDC1-206ENST00000489540 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
MDC1-206ENST00000489540 H0Y9P7 68 aa8.21□□□□□ -1.09
MDC1-206ENST00000489540 H3BPC8 53 aa8.21□□□□□ -1.09
MDC1-206ENST00000489540 MP68P56378 58 aa8.21□□□□□ -1.09
MDC1-206ENST00000489540 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
MDC1-206ENST00000489540 SEC61GP60059 68 aa8.19□□□□□ -1.1
MDC1-206ENST00000489540 S4R3F8 94 aa8.19□□□□□ -1.1
MDC1-206ENST00000489540 USH2AO75445 5202 aa8.16□□□□□ -1.1
MDC1-206ENST00000489540 LCE2BO14633 110 aa8.15□□□□□ -1.1
MDC1-206ENST00000489540 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
MDC1-206ENST00000489540 LCA10Q71F78 164 aa8.12□□□□□ -1.11
MDC1-206ENST00000489540 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
MDC1-206ENST00000489540 SSPOA2VEC9 5147 aa8.06□□□□□ -1.12
MDC1-206ENST00000489540 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
MDC1-206ENST00000489540 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
MDC1-206ENST00000489540 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
MDC1-206ENST00000489540 A8MUN3 132 aa8.02□□□□□ -1.13
MDC1-206ENST00000489540 V9GYY9 64 aa7.97□□□□□ -1.13
MDC1-206ENST00000489540 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
MDC1-206ENST00000489540 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
MDC1-206ENST00000489540 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
MDC1-206ENST00000489540 FCGBPQ9Y6R7 5405 aaPredicted RBP7.85□□□□□ -1.15
MDC1-206ENST00000489540 H0YAA0 97 aa7.84□□□□□ -1.15
MDC1-206ENST00000489540 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
MDC1-206ENST00000489540 DMAC1Q96GE9 116 aa7.82□□□□□ -1.16
MDC1-206ENST00000489540 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
MDC1-206ENST00000489540 Q1T7F1 81 aa7.78□□□□□ -1.16
MDC1-206ENST00000489540 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
MDC1-206ENST00000489540 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
MDC1-206ENST00000489540 Q5VV11 94 aa7.75□□□□□ -1.17
MDC1-206ENST00000489540 ADM2Q7Z4H4 148 aa7.73□□□□□ -1.17
MDC1-206ENST00000489540 COA5Q86WW8 74 aa7.73□□□□□ -1.17
MDC1-206ENST00000489540 MT1BP07438 61 aa7.7□□□□□ -1.18
MDC1-206ENST00000489540 ACYP2P14621 99 aa7.7□□□□□ -1.18
MDC1-206ENST00000489540 KRTAP9-7A8MTY7 169 aa7.63□□□□□ -1.19
MDC1-206ENST00000489540 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
MDC1-206ENST00000489540 A6NN06 94 aa7.59□□□□□ -1.19
MDC1-206ENST00000489540 SPTSSBQ8NFR3 76 aa7.59□□□□□ -1.19
MDC1-206ENST00000489540 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
MDC1-206ENST00000489540 PSPHP1O15172 72 aa7.55□□□□□ -1.2
MDC1-206ENST00000489540 P0C880 135 aa7.55□□□□□ -1.2
MDC1-206ENST00000489540 LINC01558Q9Y6Z2 57 aa7.55□□□□□ -1.2
MDC1-206ENST00000489540 BRK1Q8WUW1 75 aa7.53□□□□□ -1.2
MDC1-206ENST00000489540 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
MDC1-206ENST00000489540 R4GN34 69 aa7.53□□□□□ -1.2
MDC1-206ENST00000489540 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.2
MDC1-206ENST00000489540 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
MDC1-206ENST00000489540 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
MDC1-206ENST00000489540 M0QZ58 72 aa7.46□□□□□ -1.21
MDC1-206ENST00000489540 PMAIP1Q13794 54 aa7.46□□□□□ -1.21
MDC1-206ENST00000489540 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
MDC1-206ENST00000489540 A6NED7 52 aa7.39□□□□□ -1.23
MDC1-206ENST00000489540 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
MDC1-206ENST00000489540 A0A1B0GU69 56 aa7.35□□□□□ -1.23
MDC1-206ENST00000489540 PRO2289Q9P1D8 64 aa7.35□□□□□ -1.23
MDC1-206ENST00000489540 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
MDC1-206ENST00000489540 H3BS24 57 aa7.33□□□□□ -1.24
MDC1-206ENST00000489540 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
MDC1-206ENST00000489540 MT1XP80297 61 aa7.27□□□□□ -1.24
MDC1-206ENST00000489540 UQCR11O14957 56 aa7.2□□□□□ -1.26
MDC1-206ENST00000489540 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
MDC1-206ENST00000489540 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
MDC1-206ENST00000489540 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
MDC1-206ENST00000489540 A8MU10 97 aa7.1□□□□□ -1.27
MDC1-206ENST00000489540 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
MDC1-206ENST00000489540 KRTAP5-9P26371 169 aa7.09□□□□□ -1.28
MDC1-206ENST00000489540 KTN1-AS1Q86SY8 53 aa7.09□□□□□ -1.28
MDC1-206ENST00000489540 NEBP20929 6669 aa7.06□□□□□ -1.28
MDC1-206ENST00000489540 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
MDC1-206ENST00000489540 A0A1B0GU33 70 aa7.02□□□□□ -1.29
MDC1-206ENST00000489540 KMT2DO14686 5537 aa7□□□□□ -1.29
MDC1-206ENST00000489540 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
MDC1-206ENST00000489540 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
MDC1-206ENST00000489540 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
MDC1-206ENST00000489540 A0A0D9SG42 100 aa6.94□□□□□ -1.3
MDC1-206ENST00000489540 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
MDC1-206ENST00000489540 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
MDC1-206ENST00000489540 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
MDC1-206ENST00000489540 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
MDC1-206ENST00000489540 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
MDC1-206ENST00000489540 MDN1Q9NU22 5596 aa6.86□□□□□ -1.31
MDC1-206ENST00000489540 K7ERS5 55 aa6.85□□□□□ -1.31
MDC1-206ENST00000489540 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
MDC1-206ENST00000489540 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
MDC1-206ENST00000489540 SPRR2EP22531 72 aa6.77□□□□□ -1.33
MDC1-206ENST00000489540 SPRR2BP35325 72 aa6.77□□□□□ -1.33
MDC1-206ENST00000489540 SPRR2AP35326 72 aa6.77□□□□□ -1.33
MDC1-206ENST00000489540 KRTAP20-1Q3LI63 56 aa6.72□□□□□ -1.33
MDC1-206ENST00000489540 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
MDC1-206ENST00000489540 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
MDC1-206ENST00000489540 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
MDC1-206ENST00000489540 SPRR2DP22532 72 aa6.55□□□□□ -1.36
MDC1-206ENST00000489540 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms