RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PZPP20742 1482 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 RALGAPBQ86X10 1494 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 ARHGAP35Q9NRY4 1499 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 DEFB131AP59861 70 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 SVBPQ8N300 66 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 ANKARQ7Z5J8 1434 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 ARHGAP5Q13017 1502 aa-1.61□□□□□ -2.67
CCDC93-209ENST00000488908 CC2D2AQ9P2K1 1620 aa-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 MYOM2P54296 1465 aa-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 LOC105371267A0A1B0GV96 52 aa-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 HMGN2P05204 90 aaKnown RBP-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 NREPQ16612 68 aa-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 IER3IP1Q9Y5U9 82 aa-1.62□□□□□ -2.67
CCDC93-209ENST00000488908 MYO5CQ9NQX4 1742 aa-1.63□□□□□ -2.67
CCDC93-209ENST00000488908 SNAPC5O75971 98 aa-1.63□□□□□ -2.67
CCDC93-209ENST00000488908 URB2Q14146 1524 aaKnown RBP-1.63□□□□□ -2.67
CCDC93-209ENST00000488908 SCRIBQ14160 1630 aa-1.63□□□□□ -2.67
CCDC93-209ENST00000488908 TTC37Q6PGP7 1564 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 CCDC180Q9P1Z9 1646 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 PVALEFA0A1B0GWK0 134 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 NDUFA2O43678 99 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 COL5A1-AS1Q5SY13 56 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 SMIM2Q9BVW6 85 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 NHSQ6T4R5 1651 aa-1.64□□□□□ -2.67
CCDC93-209ENST00000488908 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.65□□□□□ -2.67
CCDC93-209ENST00000488908 A0A096LNI7 61 aa-1.65□□□□□ -2.67
CCDC93-209ENST00000488908 CEBPZOSA8MTT3 80 aa-1.65□□□□□ -2.67
CCDC93-209ENST00000488908 GNGT2O14610 69 aa-1.65□□□□□ -2.67
CCDC93-209ENST00000488908 ARFGEF2Q9Y6D5 1785 aa-1.65□□□□□ -2.67
CCDC93-209ENST00000488908 MROH1Q8NDA8 1641 aa-1.66□□□□□ -2.67
CCDC93-209ENST00000488908 GLI2P10070 1586 aa-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 MYMXA0A1B0GTQ4 84 aa-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 TSC22D3Q99576 134 aa-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 TMEM167BQ9NRX6 74 aa-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 ABCC6O95255 1503 aa-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 EPRSP07814 1512 aaKnown RBP-1.66□□□□□ -2.68
CCDC93-209ENST00000488908 DIP2AQ14689 1571 aa-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 NRKQ7Z2Y5 1582 aa-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 A0A087WXM4 84 aa-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 GYPAP02724 150 aa-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 FAUP35544 74 aaKnown RBP-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 MADDQ8WXG6 1647 aa-1.67□□□□□ -2.68
CCDC93-209ENST00000488908 RNF17Q9BXT8 1623 aaKnown RBP-1.68□□□□□ -2.68
CCDC93-209ENST00000488908 GNG4P50150 75 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 S100A12P80511 92 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 DEFB114Q30KQ6 69 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 LINC01590Q5TEZ4 76 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 ENHOQ6UWT2 76 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 LINC00308Q8TCZ7 52 aa-1.69□□□□□ -2.68
CCDC93-209ENST00000488908 NFAT5O94916 1531 aa-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 CLTCQ00610 1675 aaKnown RBP-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 PPP3R1P63098 170 aa-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 LINC01556Q5JQF7 62 aa-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 ATP5EP2Q5VTU8 51 aa-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 SNHG12Q9BXW3 62 aa-1.7□□□□□ -2.68
CCDC93-209ENST00000488908 MROH2AA6NES4 1674 aa-1.71□□□□□ -2.68
CCDC93-209ENST00000488908 CFAP43Q8NDM7 1665 aa-1.71□□□□□ -2.68
CCDC93-209ENST00000488908 NALCNQ8IZF0 1738 aa-1.71□□□□□ -2.68
CCDC93-209ENST00000488908 S100ZQ8WXG8 99 aa-1.71□□□□□ -2.68
CCDC93-209ENST00000488908 TIAM1Q13009 1591 aa-1.72□□□□□ -2.68
CCDC93-209ENST00000488908 DEFB124Q8NES8 71 aa-1.72□□□□□ -2.68
CCDC93-209ENST00000488908 ALS2Q96Q42 1657 aa-1.73□□□□□ -2.69
CCDC93-209ENST00000488908 K7EMI3 77 aa-1.73□□□□□ -2.69
CCDC93-209ENST00000488908 PDCD5O14737 125 aa-1.73□□□□□ -2.69
CCDC93-209ENST00000488908 LINC00643Q86TS7 51 aa-1.73□□□□□ -2.69
CCDC93-209ENST00000488908 H3BUT2 72 aa-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 SMIM13P0DJ93 91 aa-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 S100A10P60903 97 aa-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 SNRPFP62306 86 aaKnown RBP-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 TDRG1Q3Y452 100 aa-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 GTF2H5Q6ZYL4 71 aa-1.74□□□□□ -2.69
CCDC93-209ENST00000488908 TOMM7Q9P0U1 55 aa-1.75□□□□□ -2.69
CCDC93-209ENST00000488908 UNC13AQ9UPW8 1703 aa-1.75□□□□□ -2.69
CCDC93-209ENST00000488908 AKAP12Q02952 1782 aa-1.75□□□□□ -2.69
CCDC93-209ENST00000488908 KDM5DQ9BY66 1539 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 DUOX2Q9NRD8 1548 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 CORTO00230 105 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 SERF2P84101 59 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 TMEM203Q969S6 136 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 CEP162Q5TB80 1403 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 EFCAB6Q5THR3 1501 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 LMTK2Q8IWU2 1503 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 RB1CC1Q8TDY2 1594 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 PEG3Q9GZU2 1588 aa-1.76□□□□□ -2.69
CCDC93-209ENST00000488908 HMGN1P05114 100 aa-1.77□□□□□ -2.69
CCDC93-209ENST00000488908 MYO3AQ8NEV4 1616 aa-1.78□□□□□ -2.69
CCDC93-209ENST00000488908 KANTRA0A1W2PQU2 76 aa-1.79□□□□□ -2.7
CCDC93-209ENST00000488908 H3BVH4 76 aa-1.79□□□□□ -2.7
CCDC93-209ENST00000488908 NCMAPQ5T1S8 102 aa-1.79□□□□□ -2.7
CCDC93-209ENST00000488908 ATXN8Q156A1 80 aa-1.8□□□□□ -2.7
CCDC93-209ENST00000488908 H0YGX0 51 aa-1.81□□□□□ -2.7
CCDC93-209ENST00000488908 M0R1W7 72 aa-1.81□□□□□ -2.7
CCDC93-209ENST00000488908 DLEU1O43261 78 aa-1.81□□□□□ -2.7
CCDC93-209ENST00000488908 ABCC1P33527 1531 aa-1.81□□□□□ -2.7
CCDC93-209ENST00000488908 DDX60Q8IY21 1712 aaKnown RBP-1.82□□□□□ -2.7
CCDC93-209ENST00000488908 AGLP35573 1532 aa-1.82□□□□□ -2.7
CCDC93-209ENST00000488908 SYCP2Q9BX26 1530 aa-1.82□□□□□ -2.7
CCDC93-209ENST00000488908 LINC00587B1AMM8 73 aa-1.84□□□□□ -2.7
CCDC93-209ENST00000488908 TFF3Q07654 80 aa-1.84□□□□□ -2.7
CCDC93-209ENST00000488908 S100A16Q96FQ6 103 aaKnown RBP-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms