RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
CHD1L-208ENST00000488864 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
CHD1L-208ENST00000488864 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
CHD1L-208ENST00000488864 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
CHD1L-208ENST00000488864 UQCR11O14957 56 aa7.33□□□□□ -1.24
CHD1L-208ENST00000488864 HERC1Q15751 4861 aa7.31□□□□□ -1.24
CHD1L-208ENST00000488864 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
CHD1L-208ENST00000488864 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
CHD1L-208ENST00000488864 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
CHD1L-208ENST00000488864 LPAP08519 4548 aa7.22□□□□□ -1.25
CHD1L-208ENST00000488864 LRP2P98164 4655 aa7.13□□□□□ -1.27
CHD1L-208ENST00000488864 H0YAA0 97 aa7.1□□□□□ -1.27
CHD1L-208ENST00000488864 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
CHD1L-208ENST00000488864 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
CHD1L-208ENST00000488864 XP32Q5T750 250 aa7.07□□□□□ -1.28
CHD1L-208ENST00000488864 A8MUU9 505 aa7.05□□□□□ -1.28
CHD1L-208ENST00000488864 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.28
CHD1L-208ENST00000488864 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
CHD1L-208ENST00000488864 A0A1B0GU33 70 aa6.99□□□□□ -1.29
CHD1L-208ENST00000488864 H3BS24 57 aa6.97□□□□□ -1.29
CHD1L-208ENST00000488864 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
CHD1L-208ENST00000488864 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
CHD1L-208ENST00000488864 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
CHD1L-208ENST00000488864 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
CHD1L-208ENST00000488864 MUC2Q02817 5179 aa6.87□□□□□ -1.31
CHD1L-208ENST00000488864 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
CHD1L-208ENST00000488864 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
CHD1L-208ENST00000488864 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
CHD1L-208ENST00000488864 ROMO1P60602 79 aa6.83□□□□□ -1.32
CHD1L-208ENST00000488864 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
CHD1L-208ENST00000488864 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
CHD1L-208ENST00000488864 RNF213Q63HN8 5207 aa6.78□□□□□ -1.32
CHD1L-208ENST00000488864 K7ERS5 55 aa6.77□□□□□ -1.33
CHD1L-208ENST00000488864 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.33
CHD1L-208ENST00000488864 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.33
CHD1L-208ENST00000488864 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
CHD1L-208ENST00000488864 P0C880 135 aa6.69□□□□□ -1.34
CHD1L-208ENST00000488864 A0A0D9SG42 100 aa6.68□□□□□ -1.34
CHD1L-208ENST00000488864 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
CHD1L-208ENST00000488864 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
CHD1L-208ENST00000488864 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
CHD1L-208ENST00000488864 S4R3F8 94 aa6.54□□□□□ -1.36
CHD1L-208ENST00000488864 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
CHD1L-208ENST00000488864 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
CHD1L-208ENST00000488864 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CHD1L-208ENST00000488864 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
CHD1L-208ENST00000488864 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
CHD1L-208ENST00000488864 FLGP20930 4061 aaPredicted RBP6.42□□□□□ -1.38
CHD1L-208ENST00000488864 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
CHD1L-208ENST00000488864 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
CHD1L-208ENST00000488864 MT1HP80294 61 aa6.34□□□□□ -1.39
CHD1L-208ENST00000488864 M0R2T5 61 aa6.31□□□□□ -1.4
CHD1L-208ENST00000488864 M0QZ58 72 aa6.25□□□□□ -1.41
CHD1L-208ENST00000488864 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
CHD1L-208ENST00000488864 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
CHD1L-208ENST00000488864 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
CHD1L-208ENST00000488864 R4GN34 69 aa6.08□□□□□ -1.44
CHD1L-208ENST00000488864 MT2AP02795 61 aa6.04□□□□□ -1.44
CHD1L-208ENST00000488864 MT1FP04733 61 aa6.03□□□□□ -1.44
CHD1L-208ENST00000488864 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
CHD1L-208ENST00000488864 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
CHD1L-208ENST00000488864 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
CHD1L-208ENST00000488864 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
CHD1L-208ENST00000488864 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
CHD1L-208ENST00000488864 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
CHD1L-208ENST00000488864 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
CHD1L-208ENST00000488864 USH2AO75445 5202 aa5.75□□□□□ -1.49
CHD1L-208ENST00000488864 LCE2BO14633 110 aa5.75□□□□□ -1.49
CHD1L-208ENST00000488864 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
CHD1L-208ENST00000488864 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
CHD1L-208ENST00000488864 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
CHD1L-208ENST00000488864 MT1BP07438 61 aa5.65□□□□□ -1.51
CHD1L-208ENST00000488864 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
CHD1L-208ENST00000488864 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
CHD1L-208ENST00000488864 TNP1P09430 55 aa5.6□□□□□ -1.51
CHD1L-208ENST00000488864 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
CHD1L-208ENST00000488864 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
CHD1L-208ENST00000488864 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
CHD1L-208ENST00000488864 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
CHD1L-208ENST00000488864 MT1XP80297 61 aa5.43□□□□□ -1.54
CHD1L-208ENST00000488864 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
CHD1L-208ENST00000488864 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
CHD1L-208ENST00000488864 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
CHD1L-208ENST00000488864 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
CHD1L-208ENST00000488864 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
CHD1L-208ENST00000488864 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
CHD1L-208ENST00000488864 KMT2DO14686 5537 aa5.25□□□□□ -1.57
CHD1L-208ENST00000488864 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
CHD1L-208ENST00000488864 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
CHD1L-208ENST00000488864 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
CHD1L-208ENST00000488864 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
CHD1L-208ENST00000488864 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
CHD1L-208ENST00000488864 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
CHD1L-208ENST00000488864 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
CHD1L-208ENST00000488864 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
CHD1L-208ENST00000488864 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CHD1L-208ENST00000488864 INE1O15225 51 aa5.02□□□□□ -1.61
CHD1L-208ENST00000488864 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
CHD1L-208ENST00000488864 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
CHD1L-208ENST00000488864 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms