RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
RER1-207ENST00000488353 HSPG2P98160 4391 aa7.53□□□□□ -1.2
RER1-207ENST00000488353 LRP1Q07954 4544 aaKnown RBP7.52□□□□□ -1.21
RER1-207ENST00000488353 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
RER1-207ENST00000488353 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
RER1-207ENST00000488353 Q5VSD8 79 aa7.48□□□□□ -1.21
RER1-207ENST00000488353 KIAA1109Q2LD37 5005 aa7.47□□□□□ -1.21
RER1-207ENST00000488353 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
RER1-207ENST00000488353 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
RER1-207ENST00000488353 RYR1P21817 5038 aa7.43□□□□□ -1.22
RER1-207ENST00000488353 TNXBP22105 4242 aa7.42□□□□□ -1.22
RER1-207ENST00000488353 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
RER1-207ENST00000488353 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.22
RER1-207ENST00000488353 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
RER1-207ENST00000488353 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
RER1-207ENST00000488353 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
RER1-207ENST00000488353 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
RER1-207ENST00000488353 A0A0D9SG42 100 aa7.34□□□□□ -1.23
RER1-207ENST00000488353 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.24
RER1-207ENST00000488353 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
RER1-207ENST00000488353 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
RER1-207ENST00000488353 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
RER1-207ENST00000488353 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
RER1-207ENST00000488353 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
RER1-207ENST00000488353 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
RER1-207ENST00000488353 S4R3F8 94 aa7.22□□□□□ -1.25
RER1-207ENST00000488353 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
RER1-207ENST00000488353 XP32Q5T750 250 aa7.16□□□□□ -1.26
RER1-207ENST00000488353 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
RER1-207ENST00000488353 ABCA13Q86UQ4 5058 aa7.09□□□□□ -1.27
RER1-207ENST00000488353 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
RER1-207ENST00000488353 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
RER1-207ENST00000488353 LPAP08519 4548 aa7.03□□□□□ -1.28
RER1-207ENST00000488353 HERC2O95714 4834 aa7.02□□□□□ -1.28
RER1-207ENST00000488353 LRP2P98164 4655 aa7.02□□□□□ -1.29
RER1-207ENST00000488353 M0QZ58 72 aa6.97□□□□□ -1.29
RER1-207ENST00000488353 J3QL48 77 aa6.9□□□□□ -1.31
RER1-207ENST00000488353 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
RER1-207ENST00000488353 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
RER1-207ENST00000488353 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
RER1-207ENST00000488353 HERC1Q15751 4861 aa6.79□□□□□ -1.32
RER1-207ENST00000488353 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
RER1-207ENST00000488353 R4GN34 69 aa6.7□□□□□ -1.34
RER1-207ENST00000488353 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
RER1-207ENST00000488353 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
RER1-207ENST00000488353 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
RER1-207ENST00000488353 MUC2Q02817 5179 aa6.62□□□□□ -1.35
RER1-207ENST00000488353 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
RER1-207ENST00000488353 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
RER1-207ENST00000488353 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
RER1-207ENST00000488353 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
RER1-207ENST00000488353 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
RER1-207ENST00000488353 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
RER1-207ENST00000488353 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
RER1-207ENST00000488353 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
RER1-207ENST00000488353 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
RER1-207ENST00000488353 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
RER1-207ENST00000488353 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
RER1-207ENST00000488353 TNP1P09430 55 aa6.23□□□□□ -1.41
RER1-207ENST00000488353 LCE2CQ5TA81 110 aa6.21□□□□□ -1.41
RER1-207ENST00000488353 M0R2T5 61 aa6.09□□□□□ -1.43
RER1-207ENST00000488353 MT1HP80294 61 aa6.07□□□□□ -1.44
RER1-207ENST00000488353 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
RER1-207ENST00000488353 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
RER1-207ENST00000488353 MT1FP04733 61 aa5.91□□□□□ -1.46
RER1-207ENST00000488353 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
RER1-207ENST00000488353 MT2AP02795 61 aa5.91□□□□□ -1.46
RER1-207ENST00000488353 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
RER1-207ENST00000488353 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
RER1-207ENST00000488353 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
RER1-207ENST00000488353 INE1O15225 51 aa5.88□□□□□ -1.47
RER1-207ENST00000488353 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
RER1-207ENST00000488353 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
RER1-207ENST00000488353 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
RER1-207ENST00000488353 MT1BP07438 61 aa5.65□□□□□ -1.51
RER1-207ENST00000488353 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
RER1-207ENST00000488353 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
RER1-207ENST00000488353 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
RER1-207ENST00000488353 MT1XP80297 61 aa5.55□□□□□ -1.52
RER1-207ENST00000488353 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
RER1-207ENST00000488353 USH2AO75445 5202 aa5.52□□□□□ -1.53
RER1-207ENST00000488353 LCE2BO14633 110 aa5.49□□□□□ -1.53
RER1-207ENST00000488353 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
RER1-207ENST00000488353 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
RER1-207ENST00000488353 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
RER1-207ENST00000488353 KMT2DO14686 5537 aa5.26□□□□□ -1.57
RER1-207ENST00000488353 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
RER1-207ENST00000488353 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
RER1-207ENST00000488353 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
RER1-207ENST00000488353 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.58
RER1-207ENST00000488353 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.58
RER1-207ENST00000488353 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
RER1-207ENST00000488353 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
RER1-207ENST00000488353 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
RER1-207ENST00000488353 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
RER1-207ENST00000488353 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
RER1-207ENST00000488353 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
RER1-207ENST00000488353 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
RER1-207ENST00000488353 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
RER1-207ENST00000488353 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms