RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
PKD1-220ENST00000487932 VPS13CQ709C8 3753 aa6.34□□□□□ -1.4
PKD1-220ENST00000487932 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
PKD1-220ENST00000487932 AKAP9Q99996 3911 aa6.26□□□□□ -1.41
PKD1-220ENST00000487932 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
PKD1-220ENST00000487932 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
PKD1-220ENST00000487932 ZNF469Q96JG9 3925 aaPredicted RBP6.17□□□□□ -1.42
PKD1-220ENST00000487932 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
PKD1-220ENST00000487932 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
PKD1-220ENST00000487932 MT1HP80294 61 aa6.09□□□□□ -1.43
PKD1-220ENST00000487932 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
PKD1-220ENST00000487932 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
PKD1-220ENST00000487932 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.46
PKD1-220ENST00000487932 MT2AP02795 61 aa5.94□□□□□ -1.46
PKD1-220ENST00000487932 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.47
PKD1-220ENST00000487932 SPRR2EP22531 72 aa5.89□□□□□ -1.47
PKD1-220ENST00000487932 SPRR2BP35325 72 aa5.89□□□□□ -1.47
PKD1-220ENST00000487932 SPRR2AP35326 72 aa5.89□□□□□ -1.47
PKD1-220ENST00000487932 MT1FP04733 61 aa5.82□□□□□ -1.48
PKD1-220ENST00000487932 PLECQ15149 4684 aaKnown RBP5.81□□□□□ -1.48
PKD1-220ENST00000487932 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
PKD1-220ENST00000487932 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
PKD1-220ENST00000487932 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
PKD1-220ENST00000487932 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
PKD1-220ENST00000487932 DNAH2Q9P225 4427 aa5.72□□□□□ -1.49
PKD1-220ENST00000487932 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.49
PKD1-220ENST00000487932 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
PKD1-220ENST00000487932 SPRR2DP22532 72 aa5.69□□□□□ -1.5
PKD1-220ENST00000487932 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
PKD1-220ENST00000487932 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
PKD1-220ENST00000487932 DNHD1Q96M86 4753 aa5.67□□□□□ -1.5
PKD1-220ENST00000487932 FAT2Q9NYQ8 4349 aa5.65□□□□□ -1.51
PKD1-220ENST00000487932 DNAH17Q9UFH2 4485 aa5.65□□□□□ -1.51
PKD1-220ENST00000487932 ANK2Q01484 3957 aa5.64□□□□□ -1.51
PKD1-220ENST00000487932 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
PKD1-220ENST00000487932 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
PKD1-220ENST00000487932 LRP1BQ9NZR2 4599 aa5.59□□□□□ -1.51
PKD1-220ENST00000487932 CMYA5Q8N3K9 4069 aa5.59□□□□□ -1.52
PKD1-220ENST00000487932 LCE2BO14633 110 aa5.56□□□□□ -1.52
PKD1-220ENST00000487932 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
PKD1-220ENST00000487932 MT1GP13640 62 aa5.56□□□□□ -1.52
PKD1-220ENST00000487932 KMT2AQ03164 3969 aa5.56□□□□□ -1.52
PKD1-220ENST00000487932 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
PKD1-220ENST00000487932 FAT1Q14517 4588 aa5.5□□□□□ -1.53
PKD1-220ENST00000487932 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
PKD1-220ENST00000487932 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
PKD1-220ENST00000487932 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
PKD1-220ENST00000487932 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
PKD1-220ENST00000487932 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
PKD1-220ENST00000487932 DNAH7Q8WXX0 4024 aa5.39□□□□□ -1.55
PKD1-220ENST00000487932 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
PKD1-220ENST00000487932 RYR1P21817 5038 aa5.34□□□□□ -1.55
PKD1-220ENST00000487932 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
PKD1-220ENST00000487932 LYSTQ99698 3801 aa5.31□□□□□ -1.56
PKD1-220ENST00000487932 FRAS1Q86XX4 4008 aa5.31□□□□□ -1.56
PKD1-220ENST00000487932 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
PKD1-220ENST00000487932 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
PKD1-220ENST00000487932 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
PKD1-220ENST00000487932 MT1XP80297 61 aa5.25□□□□□ -1.57
PKD1-220ENST00000487932 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
PKD1-220ENST00000487932 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
PKD1-220ENST00000487932 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
PKD1-220ENST00000487932 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.57
PKD1-220ENST00000487932 APOBP04114 4563 aaKnown RBP5.2□□□□□ -1.58
PKD1-220ENST00000487932 RYR3Q15413 4870 aa5.18□□□□□ -1.58
PKD1-220ENST00000487932 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
PKD1-220ENST00000487932 MT4P47944 62 aa5.16□□□□□ -1.58
PKD1-220ENST00000487932 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
PKD1-220ENST00000487932 MT1BP07438 61 aa5.11□□□□□ -1.59
PKD1-220ENST00000487932 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
PKD1-220ENST00000487932 HSPG2P98160 4391 aa5.08□□□□□ -1.6
PKD1-220ENST00000487932 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
PKD1-220ENST00000487932 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
PKD1-220ENST00000487932 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
PKD1-220ENST00000487932 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
PKD1-220ENST00000487932 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
PKD1-220ENST00000487932 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
PKD1-220ENST00000487932 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
PKD1-220ENST00000487932 RYR2Q92736 4967 aa4.96□□□□□ -1.62
PKD1-220ENST00000487932 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
PKD1-220ENST00000487932 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
PKD1-220ENST00000487932 MYCBP2O75592 4640 aa4.93□□□□□ -1.62
PKD1-220ENST00000487932 KIAA1109Q2LD37 5005 aa4.92□□□□□ -1.62
PKD1-220ENST00000487932 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
PKD1-220ENST00000487932 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
PKD1-220ENST00000487932 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.62
PKD1-220ENST00000487932 LPAP08519 4548 aa4.87□□□□□ -1.63
PKD1-220ENST00000487932 PKD1P98161 4303 aa4.83□□□□□ -1.64
PKD1-220ENST00000487932 PRM1P04553 51 aa4.83□□□□□ -1.64
PKD1-220ENST00000487932 MT1LQ93083 61 aa4.82□□□□□ -1.64
PKD1-220ENST00000487932 MT3P25713 68 aa4.81□□□□□ -1.64
PKD1-220ENST00000487932 HERC2O95714 4834 aa4.8□□□□□ -1.64
PKD1-220ENST00000487932 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
PKD1-220ENST00000487932 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
PKD1-220ENST00000487932 HERC1Q15751 4861 aa4.78□□□□□ -1.64
PKD1-220ENST00000487932 MT1EP04732 61 aa4.77□□□□□ -1.65
PKD1-220ENST00000487932 TNXBP22105 4242 aa4.76□□□□□ -1.65
PKD1-220ENST00000487932 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
PKD1-220ENST00000487932 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
PKD1-220ENST00000487932 MT1MQ8N339 61 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 264.7 ms