RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
TOP3B-216ENST00000487485 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
TOP3B-216ENST00000487485 LCE2BO14633 110 aa5.19□□□□□ -1.58
TOP3B-216ENST00000487485 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
TOP3B-216ENST00000487485 MT2AP02795 61 aa5.15□□□□□ -1.59
TOP3B-216ENST00000487485 S4R3F8 94 aa5.13□□□□□ -1.59
TOP3B-216ENST00000487485 MT1FP04733 61 aa5.12□□□□□ -1.59
TOP3B-216ENST00000487485 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
TOP3B-216ENST00000487485 COX7CP15954 63 aa5.11□□□□□ -1.59
TOP3B-216ENST00000487485 LCA10Q71F78 164 aa5.11□□□□□ -1.59
TOP3B-216ENST00000487485 NEBP20929 6669 aa5.1□□□□□ -1.59
TOP3B-216ENST00000487485 A8MUN3 132 aa5.1□□□□□ -1.59
TOP3B-216ENST00000487485 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
TOP3B-216ENST00000487485 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
TOP3B-216ENST00000487485 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
TOP3B-216ENST00000487485 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
TOP3B-216ENST00000487485 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
TOP3B-216ENST00000487485 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
TOP3B-216ENST00000487485 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
TOP3B-216ENST00000487485 NDUFC1O43677 76 aa5.03□□□□□ -1.6
TOP3B-216ENST00000487485 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
TOP3B-216ENST00000487485 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
TOP3B-216ENST00000487485 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
TOP3B-216ENST00000487485 ACYP2P14621 99 aa4.99□□□□□ -1.61
TOP3B-216ENST00000487485 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
TOP3B-216ENST00000487485 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
TOP3B-216ENST00000487485 H7BZZ5 65 aa4.94□□□□□ -1.62
TOP3B-216ENST00000487485 CYSTM1Q9H1C7 97 aa4.93□□□□□ -1.62
TOP3B-216ENST00000487485 CHKB-CPT1BH3BT56 60 aa4.9□□□□□ -1.63
TOP3B-216ENST00000487485 H0YAA0 97 aa4.89□□□□□ -1.63
TOP3B-216ENST00000487485 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
TOP3B-216ENST00000487485 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
TOP3B-216ENST00000487485 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
TOP3B-216ENST00000487485 COA5Q86WW8 74 aa4.83□□□□□ -1.64
TOP3B-216ENST00000487485 PCP4P48539 62 aa4.82□□□□□ -1.64
TOP3B-216ENST00000487485 TMEM258P61165 79 aa4.82□□□□□ -1.64
TOP3B-216ENST00000487485 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
TOP3B-216ENST00000487485 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
TOP3B-216ENST00000487485 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
TOP3B-216ENST00000487485 P0C880 135 aa4.78□□□□□ -1.64
TOP3B-216ENST00000487485 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
TOP3B-216ENST00000487485 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
TOP3B-216ENST00000487485 KMT2DO14686 5537 aa4.74□□□□□ -1.65
TOP3B-216ENST00000487485 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
TOP3B-216ENST00000487485 R4GN34 69 aa4.72□□□□□ -1.65
TOP3B-216ENST00000487485 Q5VV11 94 aa4.71□□□□□ -1.66
TOP3B-216ENST00000487485 M0QZ58 72 aa4.69□□□□□ -1.66
TOP3B-216ENST00000487485 MT1BP07438 61 aa4.69□□□□□ -1.66
TOP3B-216ENST00000487485 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
TOP3B-216ENST00000487485 A6NN06 94 aa4.67□□□□□ -1.66
TOP3B-216ENST00000487485 SEC61GP60059 68 aa4.66□□□□□ -1.66
TOP3B-216ENST00000487485 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
TOP3B-216ENST00000487485 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
TOP3B-216ENST00000487485 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
TOP3B-216ENST00000487485 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
TOP3B-216ENST00000487485 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
TOP3B-216ENST00000487485 A0A1B0GU69 56 aa4.59□□□□□ -1.67
TOP3B-216ENST00000487485 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
TOP3B-216ENST00000487485 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
TOP3B-216ENST00000487485 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
TOP3B-216ENST00000487485 A0A1B0GU33 70 aa4.56□□□□□ -1.68
TOP3B-216ENST00000487485 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
TOP3B-216ENST00000487485 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
TOP3B-216ENST00000487485 V9GYY9 64 aa4.54□□□□□ -1.68
TOP3B-216ENST00000487485 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
TOP3B-216ENST00000487485 Q1T7F1 81 aa4.52□□□□□ -1.69
TOP3B-216ENST00000487485 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
TOP3B-216ENST00000487485 A0A0D9SG42 100 aa4.46□□□□□ -1.7
TOP3B-216ENST00000487485 MT1XP80297 61 aa4.46□□□□□ -1.7
TOP3B-216ENST00000487485 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
TOP3B-216ENST00000487485 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
TOP3B-216ENST00000487485 SPRR2EP22531 72 aa4.44□□□□□ -1.7
TOP3B-216ENST00000487485 SPRR2BP35325 72 aa4.44□□□□□ -1.7
TOP3B-216ENST00000487485 SPRR2AP35326 72 aa4.44□□□□□ -1.7
TOP3B-216ENST00000487485 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
TOP3B-216ENST00000487485 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
TOP3B-216ENST00000487485 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
TOP3B-216ENST00000487485 A8MU10 97 aa4.39□□□□□ -1.71
TOP3B-216ENST00000487485 UQCR11O14957 56 aa4.39□□□□□ -1.71
TOP3B-216ENST00000487485 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
TOP3B-216ENST00000487485 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
TOP3B-216ENST00000487485 PSPHP1O15172 72 aa4.37□□□□□ -1.71
TOP3B-216ENST00000487485 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
TOP3B-216ENST00000487485 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
TOP3B-216ENST00000487485 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
TOP3B-216ENST00000487485 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
TOP3B-216ENST00000487485 SPRR2DP22532 72 aa4.29□□□□□ -1.72
TOP3B-216ENST00000487485 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
TOP3B-216ENST00000487485 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
TOP3B-216ENST00000487485 A6NED7 52 aa4.25□□□□□ -1.73
TOP3B-216ENST00000487485 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
TOP3B-216ENST00000487485 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
TOP3B-216ENST00000487485 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
TOP3B-216ENST00000487485 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
TOP3B-216ENST00000487485 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
TOP3B-216ENST00000487485 K7ERS5 55 aa4.18□□□□□ -1.74
TOP3B-216ENST00000487485 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
TOP3B-216ENST00000487485 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
TOP3B-216ENST00000487485 TNP1P09430 55 aa4.1□□□□□ -1.75
TOP3B-216ENST00000487485 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms