RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 S4R3F8 94 aa4.64□□□□□ -1.67
MCF2L-227ENST00000486806 M0R2T5 61 aa4.63□□□□□ -1.67
MCF2L-227ENST00000486806 LCA10Q71F78 164 aa4.63□□□□□ -1.67
MCF2L-227ENST00000486806 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
MCF2L-227ENST00000486806 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
MCF2L-227ENST00000486806 ACYP2P14621 99 aa4.59□□□□□ -1.67
MCF2L-227ENST00000486806 PCP4P48539 62 aa4.56□□□□□ -1.68
MCF2L-227ENST00000486806 TMEM258P61165 79 aa4.55□□□□□ -1.68
MCF2L-227ENST00000486806 CSAG1Q6PB30 78 aa4.55□□□□□ -1.68
MCF2L-227ENST00000486806 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
MCF2L-227ENST00000486806 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
MCF2L-227ENST00000486806 COA5Q86WW8 74 aa4.52□□□□□ -1.69
MCF2L-227ENST00000486806 MT2AP02795 61 aa4.51□□□□□ -1.69
MCF2L-227ENST00000486806 CHKB-CPT1BH3BT56 60 aa4.5□□□□□ -1.69
MCF2L-227ENST00000486806 MT1FP04733 61 aa4.49□□□□□ -1.69
MCF2L-227ENST00000486806 H0YAA0 97 aa4.48□□□□□ -1.69
MCF2L-227ENST00000486806 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
MCF2L-227ENST00000486806 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
MCF2L-227ENST00000486806 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
MCF2L-227ENST00000486806 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
MCF2L-227ENST00000486806 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
MCF2L-227ENST00000486806 P0C880 135 aa4.36□□□□□ -1.71
MCF2L-227ENST00000486806 USH2AO75445 5202 aa4.34□□□□□ -1.71
MCF2L-227ENST00000486806 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
MCF2L-227ENST00000486806 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
MCF2L-227ENST00000486806 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
MCF2L-227ENST00000486806 LCE2BO14633 110 aa4.31□□□□□ -1.72
MCF2L-227ENST00000486806 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
MCF2L-227ENST00000486806 SEC61GP60059 68 aa4.28□□□□□ -1.72
MCF2L-227ENST00000486806 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
MCF2L-227ENST00000486806 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
MCF2L-227ENST00000486806 A0A1B0GU69 56 aa4.26□□□□□ -1.73
MCF2L-227ENST00000486806 R4GN34 69 aa4.26□□□□□ -1.73
MCF2L-227ENST00000486806 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
MCF2L-227ENST00000486806 M0QZ58 72 aa4.24□□□□□ -1.73
MCF2L-227ENST00000486806 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
MCF2L-227ENST00000486806 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
MCF2L-227ENST00000486806 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
MCF2L-227ENST00000486806 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
MCF2L-227ENST00000486806 Q1T7F1 81 aa4.22□□□□□ -1.73
MCF2L-227ENST00000486806 MT1BP07438 61 aa4.21□□□□□ -1.74
MCF2L-227ENST00000486806 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
MCF2L-227ENST00000486806 A0A1B0GU33 70 aa4.2□□□□□ -1.74
MCF2L-227ENST00000486806 V9GYY9 64 aa4.2□□□□□ -1.74
MCF2L-227ENST00000486806 Q5VV11 94 aa4.19□□□□□ -1.74
MCF2L-227ENST00000486806 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
MCF2L-227ENST00000486806 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
MCF2L-227ENST00000486806 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
MCF2L-227ENST00000486806 A6NN06 94 aa4.13□□□□□ -1.75
MCF2L-227ENST00000486806 PSPHP1O15172 72 aa4.13□□□□□ -1.75
MCF2L-227ENST00000486806 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
MCF2L-227ENST00000486806 UQCR11O14957 56 aa4.1□□□□□ -1.75
MCF2L-227ENST00000486806 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
MCF2L-227ENST00000486806 A0A0D9SG42 100 aa4.08□□□□□ -1.76
MCF2L-227ENST00000486806 A8MU10 97 aa4.07□□□□□ -1.76
MCF2L-227ENST00000486806 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
MCF2L-227ENST00000486806 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
MCF2L-227ENST00000486806 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
MCF2L-227ENST00000486806 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
MCF2L-227ENST00000486806 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
MCF2L-227ENST00000486806 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
MCF2L-227ENST00000486806 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
MCF2L-227ENST00000486806 MT1XP80297 61 aa4.02□□□□□ -1.77
MCF2L-227ENST00000486806 A6NED7 52 aa4□□□□□ -1.77
MCF2L-227ENST00000486806 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
MCF2L-227ENST00000486806 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
MCF2L-227ENST00000486806 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
MCF2L-227ENST00000486806 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
MCF2L-227ENST00000486806 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
MCF2L-227ENST00000486806 K7ERS5 55 aa3.86□□□□□ -1.79
MCF2L-227ENST00000486806 KMT2DO14686 5537 aa3.84□□□□□ -1.79
MCF2L-227ENST00000486806 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
MCF2L-227ENST00000486806 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
MCF2L-227ENST00000486806 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
MCF2L-227ENST00000486806 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
MCF2L-227ENST00000486806 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
MCF2L-227ENST00000486806 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
MCF2L-227ENST00000486806 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
MCF2L-227ENST00000486806 TNP1P09430 55 aa3.73□□□□□ -1.81
MCF2L-227ENST00000486806 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
MCF2L-227ENST00000486806 ROMO1P60602 79 aa3.7□□□□□ -1.82
MCF2L-227ENST00000486806 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
MCF2L-227ENST00000486806 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
MCF2L-227ENST00000486806 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
MCF2L-227ENST00000486806 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
MCF2L-227ENST00000486806 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
MCF2L-227ENST00000486806 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
MCF2L-227ENST00000486806 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
MCF2L-227ENST00000486806 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
MCF2L-227ENST00000486806 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
MCF2L-227ENST00000486806 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
MCF2L-227ENST00000486806 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
MCF2L-227ENST00000486806 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
MCF2L-227ENST00000486806 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
MCF2L-227ENST00000486806 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
MCF2L-227ENST00000486806 MT1EP04732 61 aa3.54□□□□□ -1.84
MCF2L-227ENST00000486806 NEBP20929 6669 aa3.53□□□□□ -1.84
MCF2L-227ENST00000486806 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
MCF2L-227ENST00000486806 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
MCF2L-227ENST00000486806 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms