RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MPLKIPQ8TAP9 179 aa7.53□□□□□ -1.2
POLR2J3-204ENST00000486319 Q1T7F1 81 aa7.52□□□□□ -1.2
POLR2J3-204ENST00000486319 V9GYY9 64 aa7.52□□□□□ -1.2
POLR2J3-204ENST00000486319 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
POLR2J3-204ENST00000486319 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
POLR2J3-204ENST00000486319 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
POLR2J3-204ENST00000486319 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
POLR2J3-204ENST00000486319 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
POLR2J3-204ENST00000486319 PSPHP1O15172 72 aa7.36□□□□□ -1.23
POLR2J3-204ENST00000486319 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
POLR2J3-204ENST00000486319 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
POLR2J3-204ENST00000486319 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
POLR2J3-204ENST00000486319 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
POLR2J3-204ENST00000486319 Q5VV11 94 aa7.3□□□□□ -1.24
POLR2J3-204ENST00000486319 S4R3F8 94 aa7.3□□□□□ -1.24
POLR2J3-204ENST00000486319 A0A1B0GU69 56 aa7.28□□□□□ -1.24
POLR2J3-204ENST00000486319 LCA10Q71F78 164 aa7.27□□□□□ -1.25
POLR2J3-204ENST00000486319 MT1HP80294 61 aa7.26□□□□□ -1.25
POLR2J3-204ENST00000486319 SEC61GP60059 68 aa7.24□□□□□ -1.25
POLR2J3-204ENST00000486319 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
POLR2J3-204ENST00000486319 M0R2T5 61 aa7.17□□□□□ -1.26
POLR2J3-204ENST00000486319 A6NED7 52 aa7.16□□□□□ -1.26
POLR2J3-204ENST00000486319 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
POLR2J3-204ENST00000486319 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
POLR2J3-204ENST00000486319 FLGP20930 4061 aaPredicted RBP7.11□□□□□ -1.27
POLR2J3-204ENST00000486319 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
POLR2J3-204ENST00000486319 UQCR11O14957 56 aa7.09□□□□□ -1.27
POLR2J3-204ENST00000486319 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
POLR2J3-204ENST00000486319 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
POLR2J3-204ENST00000486319 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
POLR2J3-204ENST00000486319 A0A1B0GU33 70 aa7.03□□□□□ -1.28
POLR2J3-204ENST00000486319 H0YAA0 97 aa7□□□□□ -1.29
POLR2J3-204ENST00000486319 MIR22HGQ0VDD5 57 aa7□□□□□ -1.29
POLR2J3-204ENST00000486319 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
POLR2J3-204ENST00000486319 LCE2BO14633 110 aa6.99□□□□□ -1.29
POLR2J3-204ENST00000486319 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
POLR2J3-204ENST00000486319 A8MU10 97 aa6.96□□□□□ -1.3
POLR2J3-204ENST00000486319 P0C880 135 aa6.92□□□□□ -1.3
POLR2J3-204ENST00000486319 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
POLR2J3-204ENST00000486319 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
POLR2J3-204ENST00000486319 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
POLR2J3-204ENST00000486319 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
POLR2J3-204ENST00000486319 M0QZ58 72 aa6.81□□□□□ -1.32
POLR2J3-204ENST00000486319 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
POLR2J3-204ENST00000486319 MT2AP02795 61 aa6.79□□□□□ -1.32
POLR2J3-204ENST00000486319 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
POLR2J3-204ENST00000486319 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
POLR2J3-204ENST00000486319 MT1FP04733 61 aa6.74□□□□□ -1.33
POLR2J3-204ENST00000486319 R4GN34 69 aa6.74□□□□□ -1.33
POLR2J3-204ENST00000486319 A0A0D9SG42 100 aa6.71□□□□□ -1.34
POLR2J3-204ENST00000486319 K7ERS5 55 aa6.71□□□□□ -1.34
POLR2J3-204ENST00000486319 A6NN06 94 aa6.7□□□□□ -1.34
POLR2J3-204ENST00000486319 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
POLR2J3-204ENST00000486319 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
POLR2J3-204ENST00000486319 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
POLR2J3-204ENST00000486319 USH2AO75445 5202 aa6.6□□□□□ -1.35
POLR2J3-204ENST00000486319 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
POLR2J3-204ENST00000486319 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
POLR2J3-204ENST00000486319 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
POLR2J3-204ENST00000486319 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
POLR2J3-204ENST00000486319 H3BS24 57 aa6.54□□□□□ -1.36
POLR2J3-204ENST00000486319 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
POLR2J3-204ENST00000486319 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
POLR2J3-204ENST00000486319 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
POLR2J3-204ENST00000486319 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
POLR2J3-204ENST00000486319 ROMO1P60602 79 aa6.41□□□□□ -1.38
POLR2J3-204ENST00000486319 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
POLR2J3-204ENST00000486319 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
POLR2J3-204ENST00000486319 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
POLR2J3-204ENST00000486319 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
POLR2J3-204ENST00000486319 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
POLR2J3-204ENST00000486319 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
POLR2J3-204ENST00000486319 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
POLR2J3-204ENST00000486319 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
POLR2J3-204ENST00000486319 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
POLR2J3-204ENST00000486319 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
POLR2J3-204ENST00000486319 MT1BP07438 61 aa6.2□□□□□ -1.42
POLR2J3-204ENST00000486319 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
POLR2J3-204ENST00000486319 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
POLR2J3-204ENST00000486319 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
POLR2J3-204ENST00000486319 TNP1P09430 55 aa6.04□□□□□ -1.44
POLR2J3-204ENST00000486319 MT1XP80297 61 aa5.99□□□□□ -1.45
POLR2J3-204ENST00000486319 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
POLR2J3-204ENST00000486319 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
POLR2J3-204ENST00000486319 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
POLR2J3-204ENST00000486319 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
POLR2J3-204ENST00000486319 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
POLR2J3-204ENST00000486319 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
POLR2J3-204ENST00000486319 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
POLR2J3-204ENST00000486319 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
POLR2J3-204ENST00000486319 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
POLR2J3-204ENST00000486319 KMT2DO14686 5537 aa5.7□□□□□ -1.5
POLR2J3-204ENST00000486319 NEBP20929 6669 aa5.67□□□□□ -1.5
POLR2J3-204ENST00000486319 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
POLR2J3-204ENST00000486319 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
POLR2J3-204ENST00000486319 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
POLR2J3-204ENST00000486319 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
POLR2J3-204ENST00000486319 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
POLR2J3-204ENST00000486319 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
POLR2J3-204ENST00000486319 SPRR2EP22531 72 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms