RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 MP68P56378 58 aa8.63□□□□□ -1.03
MCF2L-226ENST00000486210 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
MCF2L-226ENST00000486210 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
MCF2L-226ENST00000486210 SMIM20Q8N5G0 67 aa8.59□□□□□ -1.03
MCF2L-226ENST00000486210 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
MCF2L-226ENST00000486210 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
MCF2L-226ENST00000486210 H3BPC8 53 aa8.56□□□□□ -1.04
MCF2L-226ENST00000486210 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
MCF2L-226ENST00000486210 KRTAP6-3Q3LI67 103 aa8.51□□□□□ -1.05
MCF2L-226ENST00000486210 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
MCF2L-226ENST00000486210 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
MCF2L-226ENST00000486210 C20orf197Q8N268 126 aa8.4□□□□□ -1.06
MCF2L-226ENST00000486210 NEBP20929 6669 aa8.39□□□□□ -1.07
MCF2L-226ENST00000486210 COX7CP15954 63 aa8.37□□□□□ -1.07
MCF2L-226ENST00000486210 S4R3F8 94 aa8.36□□□□□ -1.07
MCF2L-226ENST00000486210 LCA10Q71F78 164 aa8.34□□□□□ -1.07
MCF2L-226ENST00000486210 A8MUN3 132 aa8.32□□□□□ -1.08
MCF2L-226ENST00000486210 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
MCF2L-226ENST00000486210 MUC12Q9UKN1 5478 aa8.31□□□□□ -1.08
MCF2L-226ENST00000486210 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
MCF2L-226ENST00000486210 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
MCF2L-226ENST00000486210 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
MCF2L-226ENST00000486210 CSAG1Q6PB30 78 aa8.21□□□□□ -1.1
MCF2L-226ENST00000486210 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
MCF2L-226ENST00000486210 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
MCF2L-226ENST00000486210 H7BZZ5 65 aa8.16□□□□□ -1.1
MCF2L-226ENST00000486210 NDUFC1O43677 76 aa8.16□□□□□ -1.1
MCF2L-226ENST00000486210 ACYP2P14621 99 aa8.15□□□□□ -1.1
MCF2L-226ENST00000486210 KRTAP20-1Q3LI63 56 aa8.11□□□□□ -1.11
MCF2L-226ENST00000486210 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
MCF2L-226ENST00000486210 A6NN06 94 aa7.97□□□□□ -1.13
MCF2L-226ENST00000486210 COA5Q86WW8 74 aa7.97□□□□□ -1.13
MCF2L-226ENST00000486210 H0YAA0 97 aa7.96□□□□□ -1.14
MCF2L-226ENST00000486210 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
MCF2L-226ENST00000486210 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
MCF2L-226ENST00000486210 MT1BP07438 61 aa7.93□□□□□ -1.14
MCF2L-226ENST00000486210 KMT2DO14686 5537 aa7.92□□□□□ -1.14
MCF2L-226ENST00000486210 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
MCF2L-226ENST00000486210 SPTSSBQ8NFR3 76 aa7.92□□□□□ -1.14
MCF2L-226ENST00000486210 Q5VV11 94 aa7.9□□□□□ -1.14
MCF2L-226ENST00000486210 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
MCF2L-226ENST00000486210 P0C880 135 aa7.85□□□□□ -1.15
MCF2L-226ENST00000486210 ATP5EP56381 51 aaPredicted RBP7.84□□□□□ -1.15
MCF2L-226ENST00000486210 TMEM258P61165 79 aa7.83□□□□□ -1.16
MCF2L-226ENST00000486210 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
MCF2L-226ENST00000486210 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
MCF2L-226ENST00000486210 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
MCF2L-226ENST00000486210 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
MCF2L-226ENST00000486210 PCP4P48539 62 aa7.77□□□□□ -1.17
MCF2L-226ENST00000486210 KRTAP2-3P0C7H8 128 aa7.76□□□□□ -1.17
MCF2L-226ENST00000486210 KRTAP2-4Q9BYR9 128 aa7.76□□□□□ -1.17
MCF2L-226ENST00000486210 R4GN34 69 aa7.66□□□□□ -1.18
MCF2L-226ENST00000486210 M0QZ58 72 aa7.65□□□□□ -1.18
MCF2L-226ENST00000486210 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
MCF2L-226ENST00000486210 SEC61GP60059 68 aa7.59□□□□□ -1.19
MCF2L-226ENST00000486210 SPRR2EP22531 72 aa7.55□□□□□ -1.2
MCF2L-226ENST00000486210 SPRR2BP35325 72 aa7.55□□□□□ -1.2
MCF2L-226ENST00000486210 SPRR2AP35326 72 aa7.55□□□□□ -1.2
MCF2L-226ENST00000486210 KRTAP13-4Q3LI77 160 aa7.54□□□□□ -1.2
MCF2L-226ENST00000486210 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
MCF2L-226ENST00000486210 A0A1B0GU69 56 aa7.52□□□□□ -1.21
MCF2L-226ENST00000486210 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
MCF2L-226ENST00000486210 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
MCF2L-226ENST00000486210 KRTAP2-2Q9BYT5 123 aa7.49□□□□□ -1.21
MCF2L-226ENST00000486210 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
MCF2L-226ENST00000486210 A0A1B0GU33 70 aa7.46□□□□□ -1.22
MCF2L-226ENST00000486210 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
MCF2L-226ENST00000486210 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
MCF2L-226ENST00000486210 LCE1AQ5T7P2 110 aa7.41□□□□□ -1.22
MCF2L-226ENST00000486210 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
MCF2L-226ENST00000486210 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
MCF2L-226ENST00000486210 RPS28P62857 69 aaKnown RBP7.34□□□□□ -1.23
MCF2L-226ENST00000486210 A0A0D9SG42 100 aa7.33□□□□□ -1.24
MCF2L-226ENST00000486210 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
MCF2L-226ENST00000486210 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
MCF2L-226ENST00000486210 Q1T7F1 81 aa7.31□□□□□ -1.24
MCF2L-226ENST00000486210 SPRR2DP22532 72 aa7.3□□□□□ -1.24
MCF2L-226ENST00000486210 MT1XP80297 61 aa7.29□□□□□ -1.24
MCF2L-226ENST00000486210 V9GYY9 64 aa7.28□□□□□ -1.24
MCF2L-226ENST00000486210 A8MU10 97 aa7.25□□□□□ -1.25
MCF2L-226ENST00000486210 PSPHP1O15172 72 aa7.24□□□□□ -1.25
MCF2L-226ENST00000486210 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
MCF2L-226ENST00000486210 UQCR11O14957 56 aa7.18□□□□□ -1.26
MCF2L-226ENST00000486210 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
MCF2L-226ENST00000486210 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
MCF2L-226ENST00000486210 KRTAP4-8A0A0G2JLE6 195 aa7.17□□□□□ -1.26
MCF2L-226ENST00000486210 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
MCF2L-226ENST00000486210 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
MCF2L-226ENST00000486210 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
MCF2L-226ENST00000486210 GPR98Q8WXG9 6306 aa7.11□□□□□ -1.27
MCF2L-226ENST00000486210 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
MCF2L-226ENST00000486210 A6NED7 52 aa6.99□□□□□ -1.29
MCF2L-226ENST00000486210 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
MCF2L-226ENST00000486210 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.29
MCF2L-226ENST00000486210 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
MCF2L-226ENST00000486210 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
MCF2L-226ENST00000486210 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
MCF2L-226ENST00000486210 K7ERS5 55 aa6.79□□□□□ -1.32
MCF2L-226ENST00000486210 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
MCF2L-226ENST00000486210 TNP1P09430 55 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 583.7 ms