RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 NDUFC1O43677 76 aa7.26□□□□□ -1.25
HDHD3-203ENST00000485934 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
HDHD3-203ENST00000485934 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
HDHD3-203ENST00000485934 SERP2Q8N6R1 65 aa7.19□□□□□ -1.26
HDHD3-203ENST00000485934 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
HDHD3-203ENST00000485934 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
HDHD3-203ENST00000485934 ACYP2P14621 99 aa7.12□□□□□ -1.27
HDHD3-203ENST00000485934 H0YAA0 97 aa7.1□□□□□ -1.27
HDHD3-203ENST00000485934 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
HDHD3-203ENST00000485934 LCE2BO14633 110 aa7.09□□□□□ -1.27
HDHD3-203ENST00000485934 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
HDHD3-203ENST00000485934 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
HDHD3-203ENST00000485934 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
HDHD3-203ENST00000485934 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
HDHD3-203ENST00000485934 USH2AO75445 5202 aa7.04□□□□□ -1.28
HDHD3-203ENST00000485934 COX7CP15954 63 aa7.03□□□□□ -1.28
HDHD3-203ENST00000485934 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
HDHD3-203ENST00000485934 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
HDHD3-203ENST00000485934 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
HDHD3-203ENST00000485934 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
HDHD3-203ENST00000485934 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
HDHD3-203ENST00000485934 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
HDHD3-203ENST00000485934 Q5VV11 94 aa6.9□□□□□ -1.3
HDHD3-203ENST00000485934 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
HDHD3-203ENST00000485934 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
HDHD3-203ENST00000485934 R4GN34 69 aa6.84□□□□□ -1.31
HDHD3-203ENST00000485934 H7BZZ5 65 aa6.82□□□□□ -1.32
HDHD3-203ENST00000485934 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
HDHD3-203ENST00000485934 P0C880 135 aa6.79□□□□□ -1.32
HDHD3-203ENST00000485934 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
HDHD3-203ENST00000485934 COA5Q86WW8 74 aa6.78□□□□□ -1.32
HDHD3-203ENST00000485934 MT1BP07438 61 aa6.77□□□□□ -1.33
HDHD3-203ENST00000485934 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
HDHD3-203ENST00000485934 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
HDHD3-203ENST00000485934 M0QZ58 72 aa6.75□□□□□ -1.33
HDHD3-203ENST00000485934 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
HDHD3-203ENST00000485934 SEC61GP60059 68 aa6.71□□□□□ -1.34
HDHD3-203ENST00000485934 A6NN06 94 aa6.7□□□□□ -1.34
HDHD3-203ENST00000485934 CCDC179H3BU77 68 aa6.69□□□□□ -1.34
HDHD3-203ENST00000485934 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
HDHD3-203ENST00000485934 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
HDHD3-203ENST00000485934 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
HDHD3-203ENST00000485934 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
HDHD3-203ENST00000485934 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
HDHD3-203ENST00000485934 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
HDHD3-203ENST00000485934 TMEM258P61165 79 aa6.56□□□□□ -1.36
HDHD3-203ENST00000485934 A0A1B0GU69 56 aa6.5□□□□□ -1.37
HDHD3-203ENST00000485934 A0A1B0GU33 70 aa6.49□□□□□ -1.37
HDHD3-203ENST00000485934 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
HDHD3-203ENST00000485934 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
HDHD3-203ENST00000485934 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
HDHD3-203ENST00000485934 MT1XP80297 61 aa6.42□□□□□ -1.38
HDHD3-203ENST00000485934 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
HDHD3-203ENST00000485934 PCP4P48539 62 aa6.38□□□□□ -1.39
HDHD3-203ENST00000485934 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
HDHD3-203ENST00000485934 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
HDHD3-203ENST00000485934 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
HDHD3-203ENST00000485934 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
HDHD3-203ENST00000485934 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
HDHD3-203ENST00000485934 A0A0D9SG42 100 aa6.32□□□□□ -1.4
HDHD3-203ENST00000485934 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
HDHD3-203ENST00000485934 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
HDHD3-203ENST00000485934 V9GYY9 64 aa6.24□□□□□ -1.41
HDHD3-203ENST00000485934 UQCR11O14957 56 aa6.2□□□□□ -1.42
HDHD3-203ENST00000485934 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
HDHD3-203ENST00000485934 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
HDHD3-203ENST00000485934 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
HDHD3-203ENST00000485934 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
HDHD3-203ENST00000485934 A8MU10 97 aa6.13□□□□□ -1.43
HDHD3-203ENST00000485934 Q1T7F1 81 aa6.12□□□□□ -1.43
HDHD3-203ENST00000485934 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
HDHD3-203ENST00000485934 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
HDHD3-203ENST00000485934 NEBP20929 6669 aa6.05□□□□□ -1.44
HDHD3-203ENST00000485934 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
HDHD3-203ENST00000485934 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
HDHD3-203ENST00000485934 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
HDHD3-203ENST00000485934 KMT2DO14686 5537 aa6.03□□□□□ -1.44
HDHD3-203ENST00000485934 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
HDHD3-203ENST00000485934 PSPHP1O15172 72 aa6.03□□□□□ -1.44
HDHD3-203ENST00000485934 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
HDHD3-203ENST00000485934 K7ERS5 55 aa6□□□□□ -1.45
HDHD3-203ENST00000485934 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
HDHD3-203ENST00000485934 TNP1P09430 55 aa5.93□□□□□ -1.46
HDHD3-203ENST00000485934 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
HDHD3-203ENST00000485934 A6NED7 52 aa5.9□□□□□ -1.46
HDHD3-203ENST00000485934 SPRR2EP22531 72 aa5.9□□□□□ -1.46
HDHD3-203ENST00000485934 SPRR2BP35325 72 aa5.9□□□□□ -1.46
HDHD3-203ENST00000485934 SPRR2AP35326 72 aa5.9□□□□□ -1.46
HDHD3-203ENST00000485934 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
HDHD3-203ENST00000485934 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
HDHD3-203ENST00000485934 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
HDHD3-203ENST00000485934 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
HDHD3-203ENST00000485934 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
HDHD3-203ENST00000485934 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
HDHD3-203ENST00000485934 SPRR2DP22532 72 aa5.71□□□□□ -1.5
HDHD3-203ENST00000485934 MT1EP04732 61 aa5.68□□□□□ -1.5
HDHD3-203ENST00000485934 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
HDHD3-203ENST00000485934 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
HDHD3-203ENST00000485934 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
HDHD3-203ENST00000485934 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms