RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
SND1-212ENST00000485871 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
SND1-212ENST00000485871 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
SND1-212ENST00000485871 SPINK7P58062 85 aa5.86□□□□□ -1.47
SND1-212ENST00000485871 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
SND1-212ENST00000485871 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
SND1-212ENST00000485871 PSPHP1O15172 72 aa5.83□□□□□ -1.48
SND1-212ENST00000485871 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
SND1-212ENST00000485871 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
SND1-212ENST00000485871 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
SND1-212ENST00000485871 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
SND1-212ENST00000485871 Q5VV11 94 aa5.81□□□□□ -1.48
SND1-212ENST00000485871 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
SND1-212ENST00000485871 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
SND1-212ENST00000485871 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
SND1-212ENST00000485871 A0A1B0GU69 56 aa5.72□□□□□ -1.49
SND1-212ENST00000485871 A6NED7 52 aa5.72□□□□□ -1.49
SND1-212ENST00000485871 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
SND1-212ENST00000485871 SEC61GP60059 68 aa5.69□□□□□ -1.5
SND1-212ENST00000485871 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
SND1-212ENST00000485871 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
SND1-212ENST00000485871 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
SND1-212ENST00000485871 UQCR11O14957 56 aa5.62□□□□□ -1.51
SND1-212ENST00000485871 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
SND1-212ENST00000485871 LCA10Q71F78 164 aa5.59□□□□□ -1.51
SND1-212ENST00000485871 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
SND1-212ENST00000485871 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
SND1-212ENST00000485871 S4R3F8 94 aa5.55□□□□□ -1.52
SND1-212ENST00000485871 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
SND1-212ENST00000485871 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
SND1-212ENST00000485871 MT1HP80294 61 aa5.53□□□□□ -1.52
SND1-212ENST00000485871 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SND1-212ENST00000485871 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
SND1-212ENST00000485871 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
SND1-212ENST00000485871 A0A1B0GU33 70 aa5.48□□□□□ -1.53
SND1-212ENST00000485871 A8MU10 97 aa5.48□□□□□ -1.53
SND1-212ENST00000485871 A6NN06 94 aa5.42□□□□□ -1.54
SND1-212ENST00000485871 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
SND1-212ENST00000485871 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
SND1-212ENST00000485871 CSAG1Q6PB30 78 aa5.42□□□□□ -1.54
SND1-212ENST00000485871 M0R2T5 61 aa5.4□□□□□ -1.54
SND1-212ENST00000485871 H0YAA0 97 aa5.37□□□□□ -1.55
SND1-212ENST00000485871 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
SND1-212ENST00000485871 K7ERS5 55 aa5.34□□□□□ -1.55
SND1-212ENST00000485871 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
SND1-212ENST00000485871 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
SND1-212ENST00000485871 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
SND1-212ENST00000485871 M0QZ58 72 aa5.27□□□□□ -1.57
SND1-212ENST00000485871 MT2AP02795 61 aa5.27□□□□□ -1.57
SND1-212ENST00000485871 MT1FP04733 61 aa5.24□□□□□ -1.57
SND1-212ENST00000485871 P0C880 135 aa5.24□□□□□ -1.57
SND1-212ENST00000485871 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
SND1-212ENST00000485871 USH2AO75445 5202 aa5.18□□□□□ -1.58
SND1-212ENST00000485871 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
SND1-212ENST00000485871 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
SND1-212ENST00000485871 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
SND1-212ENST00000485871 A0A0D9SG42 100 aa5.14□□□□□ -1.59
SND1-212ENST00000485871 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
SND1-212ENST00000485871 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
SND1-212ENST00000485871 R4GN34 69 aa5.12□□□□□ -1.59
SND1-212ENST00000485871 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
SND1-212ENST00000485871 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
SND1-212ENST00000485871 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
SND1-212ENST00000485871 ROMO1P60602 79 aa5.08□□□□□ -1.6
SND1-212ENST00000485871 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
SND1-212ENST00000485871 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
SND1-212ENST00000485871 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
SND1-212ENST00000485871 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
SND1-212ENST00000485871 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
SND1-212ENST00000485871 LCE2BO14633 110 aa5.02□□□□□ -1.61
SND1-212ENST00000485871 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
SND1-212ENST00000485871 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
SND1-212ENST00000485871 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
SND1-212ENST00000485871 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
SND1-212ENST00000485871 MT1BP07438 61 aa4.95□□□□□ -1.62
SND1-212ENST00000485871 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
SND1-212ENST00000485871 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
SND1-212ENST00000485871 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
SND1-212ENST00000485871 NEBP20929 6669 aa4.82□□□□□ -1.64
SND1-212ENST00000485871 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SND1-212ENST00000485871 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
SND1-212ENST00000485871 MT1XP80297 61 aa4.74□□□□□ -1.65
SND1-212ENST00000485871 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
SND1-212ENST00000485871 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
SND1-212ENST00000485871 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
SND1-212ENST00000485871 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
SND1-212ENST00000485871 TNP1P09430 55 aa4.66□□□□□ -1.66
SND1-212ENST00000485871 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
SND1-212ENST00000485871 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
SND1-212ENST00000485871 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
SND1-212ENST00000485871 KMT2DO14686 5537 aa4.56□□□□□ -1.68
SND1-212ENST00000485871 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
SND1-212ENST00000485871 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
SND1-212ENST00000485871 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
SND1-212ENST00000485871 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
SND1-212ENST00000485871 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
SND1-212ENST00000485871 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
SND1-212ENST00000485871 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
SND1-212ENST00000485871 SPRR2EP22531 72 aa4.4□□□□□ -1.71
SND1-212ENST00000485871 SPRR2BP35325 72 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 1420.3 ms