RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 H0Y9P7 68 aa3.13□□□□□ -1.91
KPNA1-208ENST00000485027 K7EQZ3 153 aa3.12□□□□□ -1.91
KPNA1-208ENST00000485027 INE1O15225 51 aa3.12□□□□□ -1.91
KPNA1-208ENST00000485027 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 H3BNG1 76 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 MT3P25713 68 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 KRTAP1-5Q9BYS1 174 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 LINC00472Q9H8W2 130 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
KPNA1-208ENST00000485027 A0A096LPF7 62 aa3.09□□□□□ -1.91
KPNA1-208ENST00000485027 UBE2DNLQ8IWF7 75 aa3.09□□□□□ -1.91
KPNA1-208ENST00000485027 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.92
KPNA1-208ENST00000485027 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
KPNA1-208ENST00000485027 PRO0255Q9UI72 69 aa3.08□□□□□ -1.92
KPNA1-208ENST00000485027 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
KPNA1-208ENST00000485027 DYNC1H1Q14204 4646 aaKnown RBP3.07□□□□□ -1.92
KPNA1-208ENST00000485027 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
KPNA1-208ENST00000485027 WFDC13Q8IUB5 93 aa3.07□□□□□ -1.92
KPNA1-208ENST00000485027 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
KPNA1-208ENST00000485027 DNAH5Q8TE73 4624 aa3.06□□□□□ -1.92
KPNA1-208ENST00000485027 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
KPNA1-208ENST00000485027 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
KPNA1-208ENST00000485027 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
KPNA1-208ENST00000485027 IGFL1Q6UW32 110 aa3.04□□□□□ -1.92
KPNA1-208ENST00000485027 DEFB105AQ8NG35 78 aa3.04□□□□□ -1.92
KPNA1-208ENST00000485027 C6orf48Q9UBA6 75 aa3.04□□□□□ -1.92
KPNA1-208ENST00000485027 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
KPNA1-208ENST00000485027 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
KPNA1-208ENST00000485027 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.93
KPNA1-208ENST00000485027 HERC1Q15751 4861 aa3.02□□□□□ -1.93
KPNA1-208ENST00000485027 HSPG2P98160 4391 aa3.02□□□□□ -1.93
KPNA1-208ENST00000485027 ACYP2P14621 99 aa3.02□□□□□ -1.93
KPNA1-208ENST00000485027 LINC01556Q5JQF7 62 aa3.02□□□□□ -1.93
KPNA1-208ENST00000485027 Q6ZRX8 168 aa3.02□□□□□ -1.93
KPNA1-208ENST00000485027 LELP1Q5T871 98 aa3.01□□□□□ -1.93
KPNA1-208ENST00000485027 A0A1B0GU69 56 aa3□□□□□ -1.93
KPNA1-208ENST00000485027 PCOTHQ58A44 107 aa3□□□□□ -1.93
KPNA1-208ENST00000485027 SRRM2Q9UQ35 2752 aaKnown RBP2.99□□□□□ -1.93
KPNA1-208ENST00000485027 SPRR1AP35321 89 aa2.99□□□□□ -1.93
KPNA1-208ENST00000485027 FAT1Q14517 4588 aa2.99□□□□□ -1.93
KPNA1-208ENST00000485027 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
KPNA1-208ENST00000485027 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
KPNA1-208ENST00000485027 KRTAP10-1P60331 282 aa2.96□□□□□ -1.94
KPNA1-208ENST00000485027 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
KPNA1-208ENST00000485027 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
KPNA1-208ENST00000485027 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
KPNA1-208ENST00000485027 DMBT1Q9UGM3 2413 aaPredicted RBP2.94□□□□□ -1.94
KPNA1-208ENST00000485027 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
KPNA1-208ENST00000485027 Q6ZSA8 131 aa2.93□□□□□ -1.94
KPNA1-208ENST00000485027 SPRR1BP22528 89 aa2.9□□□□□ -1.95
KPNA1-208ENST00000485027 Q5VSD8 79 aa2.89□□□□□ -1.95
KPNA1-208ENST00000485027 MRPL34Q9BQ48 92 aaKnown RBP2.89□□□□□ -1.95
KPNA1-208ENST00000485027 SMR3BP02814 79 aaPredicted RBP2.89□□□□□ -1.95
KPNA1-208ENST00000485027 LRP1Q07954 4544 aaKnown RBP2.88□□□□□ -1.95
KPNA1-208ENST00000485027 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
KPNA1-208ENST00000485027 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
KPNA1-208ENST00000485027 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
KPNA1-208ENST00000485027 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
KPNA1-208ENST00000485027 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
KPNA1-208ENST00000485027 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
KPNA1-208ENST00000485027 A0A096LNI7 61 aa2.84□□□□□ -1.95
KPNA1-208ENST00000485027 FAT3Q8TDW7 4589 aa2.84□□□□□ -1.96
KPNA1-208ENST00000485027 SSBP3-AS1Q7Z2R9 100 aa2.84□□□□□ -1.96
KPNA1-208ENST00000485027 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
KPNA1-208ENST00000485027 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
KPNA1-208ENST00000485027 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
KPNA1-208ENST00000485027 PRLHP81277 87 aa2.8□□□□□ -1.96
KPNA1-208ENST00000485027 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
KPNA1-208ENST00000485027 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
KPNA1-208ENST00000485027 H0YAA0 97 aa2.77□□□□□ -1.97
KPNA1-208ENST00000485027 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
KPNA1-208ENST00000485027 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
KPNA1-208ENST00000485027 TNXBP22105 4242 aa2.76□□□□□ -1.97
KPNA1-208ENST00000485027 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
KPNA1-208ENST00000485027 SPINK6Q6UWN8 80 aa2.72□□□□□ -1.97
KPNA1-208ENST00000485027 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
KPNA1-208ENST00000485027 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
KPNA1-208ENST00000485027 LRP2P98164 4655 aa2.71□□□□□ -1.98
KPNA1-208ENST00000485027 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
KPNA1-208ENST00000485027 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
KPNA1-208ENST00000485027 MUC2Q02817 5179 aa2.7□□□□□ -1.98
KPNA1-208ENST00000485027 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
KPNA1-208ENST00000485027 COX6B2Q6YFQ2 88 aa2.69□□□□□ -1.98
KPNA1-208ENST00000485027 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
KPNA1-208ENST00000485027 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
KPNA1-208ENST00000485027 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
KPNA1-208ENST00000485027 LPAP08519 4548 aa2.67□□□□□ -1.98
KPNA1-208ENST00000485027 SPINK1P00995 79 aa2.66□□□□□ -1.98
KPNA1-208ENST00000485027 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
KPNA1-208ENST00000485027 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
KPNA1-208ENST00000485027 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
KPNA1-208ENST00000485027 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
KPNA1-208ENST00000485027 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
KPNA1-208ENST00000485027 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
KPNA1-208ENST00000485027 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
KPNA1-208ENST00000485027 S4R3F8 94 aa2.51□□□□□ -2.01
KPNA1-208ENST00000485027 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
KPNA1-208ENST00000485027 A0A0D9SG42 100 aa2.48□□□□□ -2.01
KPNA1-208ENST00000485027 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
KPNA1-208ENST00000485027 KRTAP4-1Q9BYQ7 146 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms