RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
VARS-226ENST00000483275 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
VARS-226ENST00000483275 ATOX1O00244 68 aa6.21□□□□□ -1.42
VARS-226ENST00000483275 KMT2DO14686 5537 aa6.21□□□□□ -1.42
VARS-226ENST00000483275 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
VARS-226ENST00000483275 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
VARS-226ENST00000483275 S4R3F8 94 aa6.21□□□□□ -1.42
VARS-226ENST00000483275 H0Y9P7 68 aa6.2□□□□□ -1.42
VARS-226ENST00000483275 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
VARS-226ENST00000483275 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
VARS-226ENST00000483275 LCA10Q71F78 164 aa6.17□□□□□ -1.42
VARS-226ENST00000483275 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
VARS-226ENST00000483275 MP68P56378 58 aa6.14□□□□□ -1.43
VARS-226ENST00000483275 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
VARS-226ENST00000483275 SCGB1A1P11684 91 aa6.13□□□□□ -1.43
VARS-226ENST00000483275 K7ERU9 68 aa6.12□□□□□ -1.43
VARS-226ENST00000483275 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
VARS-226ENST00000483275 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
VARS-226ENST00000483275 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
VARS-226ENST00000483275 IMUPQ9GZP8 106 aa6.07□□□□□ -1.44
VARS-226ENST00000483275 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
VARS-226ENST00000483275 H3BPC8 53 aa6.04□□□□□ -1.44
VARS-226ENST00000483275 A8MUN3 132 aa6.02□□□□□ -1.45
VARS-226ENST00000483275 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
VARS-226ENST00000483275 NDUFC1O43677 76 aa5.98□□□□□ -1.45
VARS-226ENST00000483275 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
VARS-226ENST00000483275 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
VARS-226ENST00000483275 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
VARS-226ENST00000483275 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
VARS-226ENST00000483275 SPRR2EP22531 72 aa5.95□□□□□ -1.46
VARS-226ENST00000483275 SPRR2BP35325 72 aa5.95□□□□□ -1.46
VARS-226ENST00000483275 SPRR2AP35326 72 aa5.95□□□□□ -1.46
VARS-226ENST00000483275 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
VARS-226ENST00000483275 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
VARS-226ENST00000483275 MT1XP80297 61 aa5.87□□□□□ -1.47
VARS-226ENST00000483275 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
VARS-226ENST00000483275 H0YAA0 97 aa5.84□□□□□ -1.47
VARS-226ENST00000483275 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
VARS-226ENST00000483275 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
VARS-226ENST00000483275 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
VARS-226ENST00000483275 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
VARS-226ENST00000483275 ACYP2P14621 99 aa5.8□□□□□ -1.48
VARS-226ENST00000483275 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
VARS-226ENST00000483275 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
VARS-226ENST00000483275 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
VARS-226ENST00000483275 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
VARS-226ENST00000483275 SPRR2DP22532 72 aa5.75□□□□□ -1.49
VARS-226ENST00000483275 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
VARS-226ENST00000483275 SPTSSBQ8NFR3 76 aa5.75□□□□□ -1.49
VARS-226ENST00000483275 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
VARS-226ENST00000483275 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
VARS-226ENST00000483275 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
VARS-226ENST00000483275 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
VARS-226ENST00000483275 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
VARS-226ENST00000483275 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
VARS-226ENST00000483275 R4GN34 69 aa5.68□□□□□ -1.5
VARS-226ENST00000483275 P0C880 135 aa5.67□□□□□ -1.5
VARS-226ENST00000483275 COX7CP15954 63 aa5.64□□□□□ -1.51
VARS-226ENST00000483275 M0QZ58 72 aa5.63□□□□□ -1.51
VARS-226ENST00000483275 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
VARS-226ENST00000483275 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
VARS-226ENST00000483275 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
VARS-226ENST00000483275 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
VARS-226ENST00000483275 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
VARS-226ENST00000483275 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
VARS-226ENST00000483275 COA5Q86WW8 74 aa5.53□□□□□ -1.52
VARS-226ENST00000483275 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
VARS-226ENST00000483275 H7BZZ5 65 aa5.48□□□□□ -1.53
VARS-226ENST00000483275 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
VARS-226ENST00000483275 SEC61GP60059 68 aa5.46□□□□□ -1.54
VARS-226ENST00000483275 CYSTM1Q9H1C7 97 aa5.44□□□□□ -1.54
VARS-226ENST00000483275 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
VARS-226ENST00000483275 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
VARS-226ENST00000483275 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
VARS-226ENST00000483275 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
VARS-226ENST00000483275 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
VARS-226ENST00000483275 A0A1B0GU33 70 aa5.29□□□□□ -1.56
VARS-226ENST00000483275 A0A1B0GU69 56 aa5.29□□□□□ -1.56
VARS-226ENST00000483275 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
VARS-226ENST00000483275 A0A0D9SG42 100 aa5.25□□□□□ -1.57
VARS-226ENST00000483275 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
VARS-226ENST00000483275 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
VARS-226ENST00000483275 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
VARS-226ENST00000483275 TMEM258P61165 79 aa5.22□□□□□ -1.57
VARS-226ENST00000483275 MT1EP04732 61 aa5.21□□□□□ -1.58
VARS-226ENST00000483275 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
VARS-226ENST00000483275 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
VARS-226ENST00000483275 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
VARS-226ENST00000483275 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
VARS-226ENST00000483275 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
VARS-226ENST00000483275 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
VARS-226ENST00000483275 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
VARS-226ENST00000483275 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
VARS-226ENST00000483275 MT4P47944 62 aa5.1□□□□□ -1.59
VARS-226ENST00000483275 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
VARS-226ENST00000483275 A8MU10 97 aa5.06□□□□□ -1.6
VARS-226ENST00000483275 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
VARS-226ENST00000483275 UQCR11O14957 56 aa5□□□□□ -1.61
VARS-226ENST00000483275 MT1GP13640 62 aa5□□□□□ -1.61
VARS-226ENST00000483275 MT1MQ8N339 61 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms