RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 Q5VV11 94 aa11.12□□□□□ -0.63
RUNX1-216ENST00000482318 S4R3F8 94 aa11.1□□□□□ -0.63
RUNX1-216ENST00000482318 A0A1B0GU69 56 aa11.09□□□□□ -0.63
RUNX1-216ENST00000482318 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
RUNX1-216ENST00000482318 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
RUNX1-216ENST00000482318 LCA10Q71F78 164 aa11.05□□□□□ -0.64
RUNX1-216ENST00000482318 KRTAP4-1Q9BYQ7 146 aa11.05□□□□□ -0.64
RUNX1-216ENST00000482318 SEC61GP60059 68 aa11.02□□□□□ -0.65
RUNX1-216ENST00000482318 KRTAP3-3Q9BYR6 98 aa10.98□□□□□ -0.65
RUNX1-216ENST00000482318 A6NED7 52 aa10.92□□□□□ -0.66
RUNX1-216ENST00000482318 BRK1Q8WUW1 75 aa10.9□□□□□ -0.66
RUNX1-216ENST00000482318 CSAG1Q6PB30 78 aa10.84□□□□□ -0.67
RUNX1-216ENST00000482318 UQCR11O14957 56 aa10.79□□□□□ -0.68
RUNX1-216ENST00000482318 KRTAP19-2Q3LHN2 52 aa10.79□□□□□ -0.68
RUNX1-216ENST00000482318 CDC42SE1Q9NRR8 79 aa10.75□□□□□ -0.69
RUNX1-216ENST00000482318 PRO0628Q9UI54 55 aa10.75□□□□□ -0.69
RUNX1-216ENST00000482318 A0A1B0GU33 70 aa10.7□□□□□ -0.7
RUNX1-216ENST00000482318 MIR22HGQ0VDD5 57 aa10.66□□□□□ -0.7
RUNX1-216ENST00000482318 MUC2Q02817 5179 aa10.65□□□□□ -0.7
RUNX1-216ENST00000482318 SPATA8Q6RVD6 105 aa10.64□□□□□ -0.71
RUNX1-216ENST00000482318 KRTAP10-6P60371 365 aaPredicted RBP10.64□□□□□ -0.71
RUNX1-216ENST00000482318 H0YAA0 97 aa10.63□□□□□ -0.71
RUNX1-216ENST00000482318 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
RUNX1-216ENST00000482318 A8MU10 97 aa10.6□□□□□ -0.71
RUNX1-216ENST00000482318 ADM2Q7Z4H4 148 aa10.6□□□□□ -0.71
RUNX1-216ENST00000482318 FLGP20930 4061 aaPredicted RBP10.55□□□□□ -0.72
RUNX1-216ENST00000482318 P0C880 135 aa10.54□□□□□ -0.72
RUNX1-216ENST00000482318 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
RUNX1-216ENST00000482318 RNF213Q63HN8 5207 aa10.5□□□□□ -0.73
RUNX1-216ENST00000482318 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
RUNX1-216ENST00000482318 M0QZ58 72 aa10.36□□□□□ -0.75
RUNX1-216ENST00000482318 KRTAP13-4Q3LI77 160 aa10.36□□□□□ -0.75
RUNX1-216ENST00000482318 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
RUNX1-216ENST00000482318 PMAIP1Q13794 54 aa10.31□□□□□ -0.76
RUNX1-216ENST00000482318 MT1HP80294 61 aa10.29□□□□□ -0.76
RUNX1-216ENST00000482318 M0R2T5 61 aa10.27□□□□□ -0.77
RUNX1-216ENST00000482318 R4GN34 69 aa10.25□□□□□ -0.77
RUNX1-216ENST00000482318 A0A0D9SG42 100 aa10.21□□□□□ -0.77
RUNX1-216ENST00000482318 K7ERS5 55 aa10.21□□□□□ -0.77
RUNX1-216ENST00000482318 A6NN06 94 aa10.21□□□□□ -0.78
RUNX1-216ENST00000482318 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
RUNX1-216ENST00000482318 LORP23490 312 aaPredicted RBP10.14□□□□□ -0.79
RUNX1-216ENST00000482318 CRIPTQ9P021 101 aa10.14□□□□□ -0.79
RUNX1-216ENST00000482318 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
RUNX1-216ENST00000482318 KRTAP12-1P59990 96 aa10□□□□□ -0.81
RUNX1-216ENST00000482318 SPINT4Q6UDR6 99 aa9.99□□□□□ -0.81
RUNX1-216ENST00000482318 KRTAP12-2P59991 146 aa9.97□□□□□ -0.81
RUNX1-216ENST00000482318 KTN1-AS1Q86SY8 53 aa9.93□□□□□ -0.82
RUNX1-216ENST00000482318 MT2AP02795 61 aa9.92□□□□□ -0.82
RUNX1-216ENST00000482318 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
RUNX1-216ENST00000482318 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
RUNX1-216ENST00000482318 MT1FP04733 61 aa9.85□□□□□ -0.83
RUNX1-216ENST00000482318 SPRR2GQ9BYE4 73 aa9.83□□□□□ -0.84
RUNX1-216ENST00000482318 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
RUNX1-216ENST00000482318 ROMO1P60602 79 aa9.76□□□□□ -0.85
RUNX1-216ENST00000482318 KRTAP19-1Q8IUB9 90 aa9.75□□□□□ -0.85
RUNX1-216ENST00000482318 CAMK2N1Q7Z7J9 78 aa9.63□□□□□ -0.87
RUNX1-216ENST00000482318 PLAC4Q8WY50 150 aa9.59□□□□□ -0.87
RUNX1-216ENST00000482318 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
RUNX1-216ENST00000482318 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
RUNX1-216ENST00000482318 KRTAP19-8Q3LI54 63 aa9.54□□□□□ -0.88
RUNX1-216ENST00000482318 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
RUNX1-216ENST00000482318 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
RUNX1-216ENST00000482318 MT1BP07438 61 aa9.36□□□□□ -0.91
RUNX1-216ENST00000482318 LCE2BO14633 110 aa9.25□□□□□ -0.93
RUNX1-216ENST00000482318 TNP1P09430 55 aa9.19□□□□□ -0.94
RUNX1-216ENST00000482318 MT1XP80297 61 aa9.11□□□□□ -0.95
RUNX1-216ENST00000482318 KRTAP10-5P60370 271 aa9.09□□□□□ -0.95
RUNX1-216ENST00000482318 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
RUNX1-216ENST00000482318 PP632Q6XCG6 107 aa9.03□□□□□ -0.96
RUNX1-216ENST00000482318 KRTAP23-1A1A580 65 aa8.97□□□□□ -0.97
RUNX1-216ENST00000482318 USH2AO75445 5202 aa8.92□□□□□ -0.98
RUNX1-216ENST00000482318 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
RUNX1-216ENST00000482318 KRTAP10-12P60413 245 aa8.74□□□□□ -1.01
RUNX1-216ENST00000482318 KRTAP10-7P60409 375 aaPredicted RBP8.73□□□□□ -1.01
RUNX1-216ENST00000482318 LCE3AQ5TA76 89 aa8.71□□□□□ -1.01
RUNX1-216ENST00000482318 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
RUNX1-216ENST00000482318 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
RUNX1-216ENST00000482318 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
RUNX1-216ENST00000482318 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
RUNX1-216ENST00000482318 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
RUNX1-216ENST00000482318 KRTAP12-3P60328 96 aa8.39□□□□□ -1.07
RUNX1-216ENST00000482318 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
RUNX1-216ENST00000482318 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
RUNX1-216ENST00000482318 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
RUNX1-216ENST00000482318 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
RUNX1-216ENST00000482318 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
RUNX1-216ENST00000482318 KMT2DO14686 5537 aa8.22□□□□□ -1.09
RUNX1-216ENST00000482318 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
RUNX1-216ENST00000482318 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
RUNX1-216ENST00000482318 KRTAP19-7Q3SYF9 63 aa8.12□□□□□ -1.11
RUNX1-216ENST00000482318 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
RUNX1-216ENST00000482318 MT1EP04732 61 aa7.98□□□□□ -1.13
RUNX1-216ENST00000482318 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
RUNX1-216ENST00000482318 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
RUNX1-216ENST00000482318 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
RUNX1-216ENST00000482318 MT1LQ93083 61 aa7.84□□□□□ -1.15
RUNX1-216ENST00000482318 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
RUNX1-216ENST00000482318 SPRR2FQ96RM1 72 aa7.74□□□□□ -1.17
RUNX1-216ENST00000482318 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms