RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
VPS16-207ENST00000481812 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
VPS16-207ENST00000481812 H7BZZ5 65 aa9.9□□□□□ -0.82
VPS16-207ENST00000481812 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
VPS16-207ENST00000481812 KRTAP9-8Q9BYQ0 159 aa9.89□□□□□ -0.83
VPS16-207ENST00000481812 CYSTM1Q9H1C7 97 aa9.88□□□□□ -0.83
VPS16-207ENST00000481812 MT2AP02795 61 aa9.79□□□□□ -0.84
VPS16-207ENST00000481812 MT1FP04733 61 aa9.7□□□□□ -0.86
VPS16-207ENST00000481812 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
VPS16-207ENST00000481812 KRTAP10-10P60014 251 aa9.69□□□□□ -0.86
VPS16-207ENST00000481812 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
VPS16-207ENST00000481812 H0YAA0 97 aa9.68□□□□□ -0.86
VPS16-207ENST00000481812 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
VPS16-207ENST00000481812 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
VPS16-207ENST00000481812 COA5Q86WW8 74 aa9.64□□□□□ -0.87
VPS16-207ENST00000481812 TMEM258P61165 79 aa9.61□□□□□ -0.87
VPS16-207ENST00000481812 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
VPS16-207ENST00000481812 PCP4P48539 62 aa9.52□□□□□ -0.89
VPS16-207ENST00000481812 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
VPS16-207ENST00000481812 ADM2Q7Z4H4 148 aa9.5□□□□□ -0.89
VPS16-207ENST00000481812 CRIPTQ9P021 101 aa9.46□□□□□ -0.9
VPS16-207ENST00000481812 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
VPS16-207ENST00000481812 P0C880 135 aa9.37□□□□□ -0.91
VPS16-207ENST00000481812 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
VPS16-207ENST00000481812 LCE2BO14633 110 aa9.36□□□□□ -0.91
VPS16-207ENST00000481812 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
VPS16-207ENST00000481812 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
VPS16-207ENST00000481812 SEC61GP60059 68 aa9.26□□□□□ -0.93
VPS16-207ENST00000481812 R4GN34 69 aa9.24□□□□□ -0.93
VPS16-207ENST00000481812 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
VPS16-207ENST00000481812 M0QZ58 72 aa9.17□□□□□ -0.94
VPS16-207ENST00000481812 USH2AO75445 5202 aa9.15□□□□□ -0.95
VPS16-207ENST00000481812 A0A1B0GU69 56 aa9.14□□□□□ -0.95
VPS16-207ENST00000481812 Q5VV11 94 aa9.13□□□□□ -0.95
VPS16-207ENST00000481812 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
VPS16-207ENST00000481812 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
VPS16-207ENST00000481812 MT1BP07438 61 aa9.09□□□□□ -0.95
VPS16-207ENST00000481812 RPS28P62857 69 aaKnown RBP9.07□□□□□ -0.96
VPS16-207ENST00000481812 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
VPS16-207ENST00000481812 A0A1B0GU33 70 aa9.04□□□□□ -0.96
VPS16-207ENST00000481812 FSIP2Q5CZC0 6907 aa9.04□□□□□ -0.96
VPS16-207ENST00000481812 V9GYY9 64 aa9□□□□□ -0.97
VPS16-207ENST00000481812 KRTAP9-6A0A140TA67 174 aa8.99□□□□□ -0.97
VPS16-207ENST00000481812 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
VPS16-207ENST00000481812 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
VPS16-207ENST00000481812 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
VPS16-207ENST00000481812 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
VPS16-207ENST00000481812 Q1T7F1 81 aa8.96□□□□□ -0.98
VPS16-207ENST00000481812 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
VPS16-207ENST00000481812 A6NN06 94 aa8.93□□□□□ -0.98
VPS16-207ENST00000481812 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
VPS16-207ENST00000481812 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
VPS16-207ENST00000481812 UQCR11O14957 56 aa8.78□□□□□ -1
VPS16-207ENST00000481812 KRTAP10-5P60370 271 aa8.78□□□□□ -1
VPS16-207ENST00000481812 A0A0D9SG42 100 aa8.75□□□□□ -1.01
VPS16-207ENST00000481812 PSPHP1O15172 72 aa8.75□□□□□ -1.01
VPS16-207ENST00000481812 FCGBPQ9Y6R7 5405 aaPredicted RBP8.7□□□□□ -1.02
VPS16-207ENST00000481812 PRO2289Q9P1D8 64 aa8.69□□□□□ -1.02
VPS16-207ENST00000481812 MT1XP80297 61 aa8.67□□□□□ -1.02
VPS16-207ENST00000481812 A8MU10 97 aa8.66□□□□□ -1.02
VPS16-207ENST00000481812 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
VPS16-207ENST00000481812 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
VPS16-207ENST00000481812 SPINT4Q6UDR6 99 aa8.6□□□□□ -1.03
VPS16-207ENST00000481812 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
VPS16-207ENST00000481812 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
VPS16-207ENST00000481812 A6NED7 52 aa8.52□□□□□ -1.05
VPS16-207ENST00000481812 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
VPS16-207ENST00000481812 K7ERS5 55 aa8.36□□□□□ -1.07
VPS16-207ENST00000481812 CDC42SE1Q9NRR8 79 aa8.32□□□□□ -1.08
VPS16-207ENST00000481812 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
VPS16-207ENST00000481812 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
VPS16-207ENST00000481812 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
VPS16-207ENST00000481812 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.1
VPS16-207ENST00000481812 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
VPS16-207ENST00000481812 KRTAP6-3Q3LI67 103 aa8.13□□□□□ -1.11
VPS16-207ENST00000481812 TNP1P09430 55 aa8.1□□□□□ -1.11
VPS16-207ENST00000481812 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
VPS16-207ENST00000481812 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
VPS16-207ENST00000481812 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
VPS16-207ENST00000481812 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
VPS16-207ENST00000481812 KRTAP5-9P26371 169 aa8.02□□□□□ -1.13
VPS16-207ENST00000481812 KMT2DO14686 5537 aa8.02□□□□□ -1.13
VPS16-207ENST00000481812 BRK1Q8WUW1 75 aa7.99□□□□□ -1.13
VPS16-207ENST00000481812 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.14
VPS16-207ENST00000481812 ROMO1P60602 79 aa7.9□□□□□ -1.14
VPS16-207ENST00000481812 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
VPS16-207ENST00000481812 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
VPS16-207ENST00000481812 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
VPS16-207ENST00000481812 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
VPS16-207ENST00000481812 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
VPS16-207ENST00000481812 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
VPS16-207ENST00000481812 MT1EP04732 61 aa7.65□□□□□ -1.18
VPS16-207ENST00000481812 LCE1AQ5T7P2 110 aa7.62□□□□□ -1.19
VPS16-207ENST00000481812 SPRR2EP22531 72 aa7.6□□□□□ -1.19
VPS16-207ENST00000481812 SPRR2BP35325 72 aa7.6□□□□□ -1.19
VPS16-207ENST00000481812 SPRR2AP35326 72 aa7.6□□□□□ -1.19
VPS16-207ENST00000481812 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
VPS16-207ENST00000481812 PRO0628Q9UI54 55 aa7.57□□□□□ -1.2
VPS16-207ENST00000481812 MDN1Q9NU22 5596 aa7.57□□□□□ -1.2
VPS16-207ENST00000481812 PMAIP1Q13794 54 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms