RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
TRIM27-205ENST00000481474 AKAP9Q99996 3911 aa4.99□□□□□ -1.61
TRIM27-205ENST00000481474 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
TRIM27-205ENST00000481474 SPRR2EP22531 72 aa4.82□□□□□ -1.64
TRIM27-205ENST00000481474 SPRR2BP35325 72 aa4.82□□□□□ -1.64
TRIM27-205ENST00000481474 SPRR2AP35326 72 aa4.82□□□□□ -1.64
TRIM27-205ENST00000481474 HUWE1Q7Z6Z7 4374 aaKnown RBP4.82□□□□□ -1.64
TRIM27-205ENST00000481474 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
TRIM27-205ENST00000481474 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
TRIM27-205ENST00000481474 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
TRIM27-205ENST00000481474 SPRR2DP22532 72 aa4.63□□□□□ -1.67
TRIM27-205ENST00000481474 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
TRIM27-205ENST00000481474 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
TRIM27-205ENST00000481474 KMT2AQ03164 3969 aa4.59□□□□□ -1.68
TRIM27-205ENST00000481474 LYSTQ99698 3801 aa4.58□□□□□ -1.68
TRIM27-205ENST00000481474 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
TRIM27-205ENST00000481474 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
TRIM27-205ENST00000481474 DNAH10Q8IVF4 4471 aa4.51□□□□□ -1.69
TRIM27-205ENST00000481474 MT1HP80294 61 aa4.51□□□□□ -1.69
TRIM27-205ENST00000481474 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
TRIM27-205ENST00000481474 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
TRIM27-205ENST00000481474 DNAH9Q9NYC9 4486 aa4.47□□□□□ -1.69
TRIM27-205ENST00000481474 LCE2BO14633 110 aa4.46□□□□□ -1.7
TRIM27-205ENST00000481474 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
TRIM27-205ENST00000481474 ANK2Q01484 3957 aa4.4□□□□□ -1.7
TRIM27-205ENST00000481474 DNAH1Q9P2D7 4330 aa4.39□□□□□ -1.71
TRIM27-205ENST00000481474 MT4P47944 62 aa4.38□□□□□ -1.71
TRIM27-205ENST00000481474 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
TRIM27-205ENST00000481474 MT1GP13640 62 aa4.37□□□□□ -1.71
TRIM27-205ENST00000481474 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
TRIM27-205ENST00000481474 CMYA5Q8N3K9 4069 aa4.36□□□□□ -1.71
TRIM27-205ENST00000481474 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
TRIM27-205ENST00000481474 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
TRIM27-205ENST00000481474 MT2AP02795 61 aa4.33□□□□□ -1.72
TRIM27-205ENST00000481474 LCE2DQ5TA82 110 aaPredicted RBP4.32□□□□□ -1.72
TRIM27-205ENST00000481474 DNAH2Q9P225 4427 aa4.29□□□□□ -1.72
TRIM27-205ENST00000481474 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
TRIM27-205ENST00000481474 PLECQ15149 4684 aaKnown RBP4.28□□□□□ -1.72
TRIM27-205ENST00000481474 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
TRIM27-205ENST00000481474 MT1FP04733 61 aa4.28□□□□□ -1.72
TRIM27-205ENST00000481474 DNAH11Q96DT5 4516 aa4.27□□□□□ -1.73
TRIM27-205ENST00000481474 DNAH7Q8WXX0 4024 aa4.26□□□□□ -1.73
TRIM27-205ENST00000481474 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
TRIM27-205ENST00000481474 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
TRIM27-205ENST00000481474 FAT3Q8TDW7 4589 aa4.23□□□□□ -1.73
TRIM27-205ENST00000481474 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TRIM27-205ENST00000481474 FAT1Q14517 4588 aa4.21□□□□□ -1.74
TRIM27-205ENST00000481474 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
TRIM27-205ENST00000481474 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
TRIM27-205ENST00000481474 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
TRIM27-205ENST00000481474 FAT2Q9NYQ8 4349 aa4.15□□□□□ -1.75
TRIM27-205ENST00000481474 LRP1BQ9NZR2 4599 aa4.12□□□□□ -1.75
TRIM27-205ENST00000481474 VPS13DQ5THJ4 4388 aa4.12□□□□□ -1.75
TRIM27-205ENST00000481474 DNAH17Q9UFH2 4485 aa4.12□□□□□ -1.75
TRIM27-205ENST00000481474 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TRIM27-205ENST00000481474 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.75
TRIM27-205ENST00000481474 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
TRIM27-205ENST00000481474 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
TRIM27-205ENST00000481474 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
TRIM27-205ENST00000481474 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
TRIM27-205ENST00000481474 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TRIM27-205ENST00000481474 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
TRIM27-205ENST00000481474 LPAP08519 4548 aa4.03□□□□□ -1.76
TRIM27-205ENST00000481474 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
TRIM27-205ENST00000481474 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
TRIM27-205ENST00000481474 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
TRIM27-205ENST00000481474 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
TRIM27-205ENST00000481474 RYR1P21817 5038 aa3.97□□□□□ -1.77
TRIM27-205ENST00000481474 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.78
TRIM27-205ENST00000481474 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
TRIM27-205ENST00000481474 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
TRIM27-205ENST00000481474 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.79
TRIM27-205ENST00000481474 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
TRIM27-205ENST00000481474 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
TRIM27-205ENST00000481474 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
TRIM27-205ENST00000481474 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
TRIM27-205ENST00000481474 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
TRIM27-205ENST00000481474 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
TRIM27-205ENST00000481474 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
TRIM27-205ENST00000481474 PRM1P04553 51 aa3.83□□□□□ -1.8
TRIM27-205ENST00000481474 HSPG2P98160 4391 aa3.81□□□□□ -1.8
TRIM27-205ENST00000481474 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
TRIM27-205ENST00000481474 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
TRIM27-205ENST00000481474 MT1XP80297 61 aa3.73□□□□□ -1.81
TRIM27-205ENST00000481474 RYR3Q15413 4870 aa3.72□□□□□ -1.81
TRIM27-205ENST00000481474 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
TRIM27-205ENST00000481474 LRP2P98164 4655 aa3.71□□□□□ -1.82
TRIM27-205ENST00000481474 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
TRIM27-205ENST00000481474 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
TRIM27-205ENST00000481474 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
TRIM27-205ENST00000481474 HYDINQ4G0P3 5121 aa3.68□□□□□ -1.82
TRIM27-205ENST00000481474 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
TRIM27-205ENST00000481474 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
TRIM27-205ENST00000481474 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
TRIM27-205ENST00000481474 PKD1P98161 4303 aa3.65□□□□□ -1.83
TRIM27-205ENST00000481474 MT3P25713 68 aa3.64□□□□□ -1.83
TRIM27-205ENST00000481474 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
TRIM27-205ENST00000481474 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.84
TRIM27-205ENST00000481474 MT1BP07438 61 aa3.58□□□□□ -1.84
TRIM27-205ENST00000481474 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms