RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 A8MUN3 132 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 Q5XG85 94 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 Q6Q795 121 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 TEN1Q86WV5 123 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 ANKRD29Q8N6D5 301 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 Q96NJ1 140 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 VPS25Q9BRG1 176 aa1.94□□□□□ -2.1
UPF3A-207ENST00000481131 CCKP06307 115 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 COL5A1-AS1Q5SY13 56 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 KRTAP4-1Q9BYQ7 146 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 C14orf132Q9NPU4 83 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 SPCS1Q9Y6A9 102 aa1.93□□□□□ -2.1
UPF3A-207ENST00000481131 TRBV20-1A0A075B6N2 111 aa1.92□□□□□ -2.1
UPF3A-207ENST00000481131 RBM3P98179 157 aaKnown RBP1.92□□□□□ -2.1
UPF3A-207ENST00000481131 ASB16-AS1Q495Z4 193 aa1.92□□□□□ -2.1
UPF3A-207ENST00000481131 Q6ZQT0 140 aa1.92□□□□□ -2.1
UPF3A-207ENST00000481131 SIGMAR1Q99720 223 aa1.92□□□□□ -2.1
UPF3A-207ENST00000481131 A0A1B0GW54 56 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 H3BT86 120 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 K7EP34 96 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 OBSCN-AS1Q96MR7 158 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 DSCR8Q96T75 97 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 SS18L2Q9UHA2 77 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 NEBP20929 6669 aa1.91□□□□□ -2.1
UPF3A-207ENST00000481131 LOC110117498A0A087WWA1 95 aa1.9□□□□□ -2.11
UPF3A-207ENST00000481131 JMJD7-PLA2G4BH0Y9G9 81 aa1.9□□□□□ -2.11
UPF3A-207ENST00000481131 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
UPF3A-207ENST00000481131 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
UPF3A-207ENST00000481131 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
UPF3A-207ENST00000481131 A0A1B0GV90 55 aa1.88□□□□□ -2.11
UPF3A-207ENST00000481131 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
UPF3A-207ENST00000481131 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
UPF3A-207ENST00000481131 ETDBQ3ZM63 59 aa1.87□□□□□ -2.11
UPF3A-207ENST00000481131 GTF2H5Q6ZYL4 71 aa1.87□□□□□ -2.11
UPF3A-207ENST00000481131 IGKV3D-7A0A0C4DH55 119 aa1.86□□□□□ -2.11
UPF3A-207ENST00000481131 PDE6GP18545 87 aa1.86□□□□□ -2.11
UPF3A-207ENST00000481131 PMAIP1Q13794 54 aa1.86□□□□□ -2.11
UPF3A-207ENST00000481131 NREPQ16612 68 aa1.86□□□□□ -2.11
UPF3A-207ENST00000481131 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
UPF3A-207ENST00000481131 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 F8W1H4 67 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 K7EQZ3 153 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 TMEM258P61165 79 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 LINC00846Q9NV44 126 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
UPF3A-207ENST00000481131 J3KT08 172 aa1.84□□□□□ -2.11
UPF3A-207ENST00000481131 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
UPF3A-207ENST00000481131 PRR15Q8IV56 129 aa1.84□□□□□ -2.11
UPF3A-207ENST00000481131 FLGP20930 4061 aaPredicted RBP1.83□□□□□ -2.12
UPF3A-207ENST00000481131 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
UPF3A-207ENST00000481131 NDUFB1O75438 58 aa1.83□□□□□ -2.12
UPF3A-207ENST00000481131 ATP11AUNQ6ZP68 121 aa1.83□□□□□ -2.12
UPF3A-207ENST00000481131 WFDC13Q8IUB5 93 aa1.83□□□□□ -2.12
UPF3A-207ENST00000481131 UBL5Q9BZL1 73 aa1.82□□□□□ -2.12
UPF3A-207ENST00000481131 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
UPF3A-207ENST00000481131 MT1HP80294 61 aa1.81□□□□□ -2.12
UPF3A-207ENST00000481131 COA5Q86WW8 74 aa1.81□□□□□ -2.12
UPF3A-207ENST00000481131 TMEM254Q8TBM7 123 aa1.81□□□□□ -2.12
UPF3A-207ENST00000481131 MRPL34Q9BQ48 92 aaKnown RBP1.81□□□□□ -2.12
UPF3A-207ENST00000481131 CASC2Q6XLA1 102 aa1.8□□□□□ -2.12
UPF3A-207ENST00000481131 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
UPF3A-207ENST00000481131 HCG22E2RYF7 251 aa1.79□□□□□ -2.12
UPF3A-207ENST00000481131 A0A087WVE0 104 aa1.78□□□□□ -2.12
UPF3A-207ENST00000481131 SPINK7P58062 85 aa1.78□□□□□ -2.12
UPF3A-207ENST00000481131 HIST1H4AP62805 103 aaKnown RBP1.78□□□□□ -2.12
UPF3A-207ENST00000481131 FAM236DA0A1B0GTK5 79 aa1.77□□□□□ -2.13
UPF3A-207ENST00000481131 ACYP1P07311 99 aa1.77□□□□□ -2.13
UPF3A-207ENST00000481131 FAM236CP0DP71 79 aa1.77□□□□□ -2.13
UPF3A-207ENST00000481131 M0R2T5 61 aa1.76□□□□□ -2.13
UPF3A-207ENST00000481131 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
UPF3A-207ENST00000481131 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
UPF3A-207ENST00000481131 LINC00643Q86TS7 51 aa1.75□□□□□ -2.13
UPF3A-207ENST00000481131 Q1T7F1 81 aa1.74□□□□□ -2.13
UPF3A-207ENST00000481131 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
UPF3A-207ENST00000481131 J3QR89 54 aa1.73□□□□□ -2.13
UPF3A-207ENST00000481131 MT-ATP8P03928 68 aa1.73□□□□□ -2.13
UPF3A-207ENST00000481131 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
UPF3A-207ENST00000481131 H0Y9P7 68 aa1.72□□□□□ -2.13
UPF3A-207ENST00000481131 TP53AIP1Q9HCN2 124 aa1.72□□□□□ -2.13
UPF3A-207ENST00000481131 K7ERU9 68 aa1.71□□□□□ -2.14
UPF3A-207ENST00000481131 MT2AP02795 61 aa1.71□□□□□ -2.14
UPF3A-207ENST00000481131 MT1FP04733 61 aa1.71□□□□□ -2.14
UPF3A-207ENST00000481131 UQCRQO14949 82 aa1.7□□□□□ -2.14
UPF3A-207ENST00000481131 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
UPF3A-207ENST00000481131 CYP4F30PQ9H0H9 118 aa1.7□□□□□ -2.14
UPF3A-207ENST00000481131 FAM236AA0A1B0GUQ0 79 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 FAM236BA0A1B0GV22 79 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 LOC101927531A0A1B0GV80 90 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 LINC00208Q96KT6 92 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
UPF3A-207ENST00000481131 LCA10Q71F78 164 aa1.68□□□□□ -2.14
UPF3A-207ENST00000481131 S4R3F8 94 aa1.68□□□□□ -2.14
UPF3A-207ENST00000481131 ATOX1O00244 68 aa1.67□□□□□ -2.14
UPF3A-207ENST00000481131 SCGB1A1P11684 91 aa1.67□□□□□ -2.14
UPF3A-207ENST00000481131 IMUPQ9GZP8 106 aa1.66□□□□□ -2.14
UPF3A-207ENST00000481131 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
UPF3A-207ENST00000481131 SNURFQ9Y675 71 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms