RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 LCE2DQ5TA82 110 aaPredicted RBP6.3□□□□□ -1.4
SIK3-209ENST00000480222 S4R3F8 94 aa6.23□□□□□ -1.41
SIK3-209ENST00000480222 COA5Q86WW8 74 aa6.22□□□□□ -1.41
SIK3-209ENST00000480222 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
SIK3-209ENST00000480222 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
SIK3-209ENST00000480222 SERP1Q9Y6X1 66 aa6.18□□□□□ -1.42
SIK3-209ENST00000480222 LCA10Q71F78 164 aa6.17□□□□□ -1.42
SIK3-209ENST00000480222 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
SIK3-209ENST00000480222 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
SIK3-209ENST00000480222 MT1HP80294 61 aa6.12□□□□□ -1.43
SIK3-209ENST00000480222 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
SIK3-209ENST00000480222 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
SIK3-209ENST00000480222 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
SIK3-209ENST00000480222 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
SIK3-209ENST00000480222 M0R2T5 61 aa6.06□□□□□ -1.44
SIK3-209ENST00000480222 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
SIK3-209ENST00000480222 H0YAA0 97 aa6□□□□□ -1.45
SIK3-209ENST00000480222 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
SIK3-209ENST00000480222 V9GYY9 64 aa5.95□□□□□ -1.46
SIK3-209ENST00000480222 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
SIK3-209ENST00000480222 SEC61GP60059 68 aa5.92□□□□□ -1.46
SIK3-209ENST00000480222 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
SIK3-209ENST00000480222 Q1T7F1 81 aa5.91□□□□□ -1.46
SIK3-209ENST00000480222 A0A1B0GU69 56 aa5.9□□□□□ -1.46
SIK3-209ENST00000480222 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
SIK3-209ENST00000480222 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
SIK3-209ENST00000480222 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
SIK3-209ENST00000480222 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
SIK3-209ENST00000480222 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
SIK3-209ENST00000480222 MT2AP02795 61 aa5.84□□□□□ -1.47
SIK3-209ENST00000480222 P0C880 135 aa5.82□□□□□ -1.48
SIK3-209ENST00000480222 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
SIK3-209ENST00000480222 MT1FP04733 61 aa5.79□□□□□ -1.48
SIK3-209ENST00000480222 PSPHP1O15172 72 aa5.77□□□□□ -1.49
SIK3-209ENST00000480222 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
SIK3-209ENST00000480222 A0A1B0GU33 70 aa5.75□□□□□ -1.49
SIK3-209ENST00000480222 Q5VV11 94 aa5.74□□□□□ -1.49
SIK3-209ENST00000480222 M0QZ58 72 aa5.73□□□□□ -1.49
SIK3-209ENST00000480222 R4GN34 69 aa5.73□□□□□ -1.49
SIK3-209ENST00000480222 SSPOA2VEC9 5147 aa5.71□□□□□ -1.5
SIK3-209ENST00000480222 USH2AO75445 5202 aa5.7□□□□□ -1.5
SIK3-209ENST00000480222 UQCR11O14957 56 aa5.69□□□□□ -1.5
SIK3-209ENST00000480222 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
SIK3-209ENST00000480222 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
SIK3-209ENST00000480222 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
SIK3-209ENST00000480222 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
SIK3-209ENST00000480222 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
SIK3-209ENST00000480222 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
SIK3-209ENST00000480222 A6NED7 52 aa5.63□□□□□ -1.51
SIK3-209ENST00000480222 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
SIK3-209ENST00000480222 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
SIK3-209ENST00000480222 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
SIK3-209ENST00000480222 A6NN06 94 aa5.56□□□□□ -1.52
SIK3-209ENST00000480222 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
SIK3-209ENST00000480222 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
SIK3-209ENST00000480222 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
SIK3-209ENST00000480222 A0A0D9SG42 100 aa5.52□□□□□ -1.53
SIK3-209ENST00000480222 A8MU10 97 aa5.51□□□□□ -1.53
SIK3-209ENST00000480222 LCE2BO14633 110 aa5.5□□□□□ -1.53
SIK3-209ENST00000480222 MT1BP07438 61 aa5.45□□□□□ -1.54
SIK3-209ENST00000480222 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
SIK3-209ENST00000480222 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
SIK3-209ENST00000480222 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
SIK3-209ENST00000480222 K7ERS5 55 aa5.43□□□□□ -1.54
SIK3-209ENST00000480222 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
SIK3-209ENST00000480222 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
SIK3-209ENST00000480222 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
SIK3-209ENST00000480222 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
SIK3-209ENST00000480222 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
SIK3-209ENST00000480222 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
SIK3-209ENST00000480222 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
SIK3-209ENST00000480222 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
SIK3-209ENST00000480222 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
SIK3-209ENST00000480222 MT1XP80297 61 aa5.24□□□□□ -1.57
SIK3-209ENST00000480222 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
SIK3-209ENST00000480222 ROMO1P60602 79 aa5.14□□□□□ -1.59
SIK3-209ENST00000480222 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
SIK3-209ENST00000480222 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
SIK3-209ENST00000480222 NEBP20929 6669 aa5.11□□□□□ -1.59
SIK3-209ENST00000480222 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
SIK3-209ENST00000480222 TNP1P09430 55 aa5.07□□□□□ -1.6
SIK3-209ENST00000480222 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
SIK3-209ENST00000480222 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
SIK3-209ENST00000480222 KRTAP10-12P60413 245 aa5□□□□□ -1.61
SIK3-209ENST00000480222 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
SIK3-209ENST00000480222 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
SIK3-209ENST00000480222 KMT2DO14686 5537 aa4.91□□□□□ -1.62
SIK3-209ENST00000480222 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
SIK3-209ENST00000480222 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
SIK3-209ENST00000480222 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
SIK3-209ENST00000480222 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
SIK3-209ENST00000480222 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
SIK3-209ENST00000480222 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
SIK3-209ENST00000480222 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
SIK3-209ENST00000480222 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
SIK3-209ENST00000480222 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SIK3-209ENST00000480222 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
SIK3-209ENST00000480222 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
SIK3-209ENST00000480222 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SIK3-209ENST00000480222 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms