RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
PKNOX1-206ENST00000480179 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
PKNOX1-206ENST00000480179 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
PKNOX1-206ENST00000480179 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
PKNOX1-206ENST00000480179 Q5VV11 94 aa7.54□□□□□ -1.2
PKNOX1-206ENST00000480179 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
PKNOX1-206ENST00000480179 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
PKNOX1-206ENST00000480179 MUC2Q02817 5179 aa7.46□□□□□ -1.21
PKNOX1-206ENST00000480179 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
PKNOX1-206ENST00000480179 A0A1B0GU69 56 aa7.42□□□□□ -1.22
PKNOX1-206ENST00000480179 A6NED7 52 aa7.39□□□□□ -1.23
PKNOX1-206ENST00000480179 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
PKNOX1-206ENST00000480179 KRTAP9-2Q9BYQ4 174 aa7.35□□□□□ -1.23
PKNOX1-206ENST00000480179 PRO0628Q9UI54 55 aa7.34□□□□□ -1.23
PKNOX1-206ENST00000480179 S4R3F8 94 aa7.33□□□□□ -1.24
PKNOX1-206ENST00000480179 LCA10Q71F78 164 aa7.32□□□□□ -1.24
PKNOX1-206ENST00000480179 RBM12B-AS1Q9P1G2 102 aa7.32□□□□□ -1.24
PKNOX1-206ENST00000480179 A8MU10 97 aa7.31□□□□□ -1.24
PKNOX1-206ENST00000480179 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
PKNOX1-206ENST00000480179 SEC61GP60059 68 aa7.3□□□□□ -1.24
PKNOX1-206ENST00000480179 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
PKNOX1-206ENST00000480179 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
PKNOX1-206ENST00000480179 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
PKNOX1-206ENST00000480179 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
PKNOX1-206ENST00000480179 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
PKNOX1-206ENST00000480179 UQCR11O14957 56 aa7.2□□□□□ -1.26
PKNOX1-206ENST00000480179 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
PKNOX1-206ENST00000480179 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
PKNOX1-206ENST00000480179 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
PKNOX1-206ENST00000480179 A0A1B0GU33 70 aa7.13□□□□□ -1.27
PKNOX1-206ENST00000480179 SVIPQ8NHG7 77 aa7.13□□□□□ -1.27
PKNOX1-206ENST00000480179 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
PKNOX1-206ENST00000480179 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
PKNOX1-206ENST00000480179 H0YAA0 97 aa7.07□□□□□ -1.28
PKNOX1-206ENST00000480179 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
PKNOX1-206ENST00000480179 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
PKNOX1-206ENST00000480179 P0C880 135 aa7.04□□□□□ -1.28
PKNOX1-206ENST00000480179 PMAIP1Q13794 54 aa7.03□□□□□ -1.28
PKNOX1-206ENST00000480179 A6NN06 94 aa6.96□□□□□ -1.29
PKNOX1-206ENST00000480179 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
PKNOX1-206ENST00000480179 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
PKNOX1-206ENST00000480179 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
PKNOX1-206ENST00000480179 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
PKNOX1-206ENST00000480179 A0A0D9SG42 100 aa6.89□□□□□ -1.31
PKNOX1-206ENST00000480179 MT1HP80294 61 aa6.85□□□□□ -1.31
PKNOX1-206ENST00000480179 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
PKNOX1-206ENST00000480179 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
PKNOX1-206ENST00000480179 M0R2T5 61 aa6.8□□□□□ -1.32
PKNOX1-206ENST00000480179 M0QZ58 72 aa6.79□□□□□ -1.32
PKNOX1-206ENST00000480179 K7ERS5 55 aa6.79□□□□□ -1.32
PKNOX1-206ENST00000480179 KTN1-AS1Q86SY8 53 aa6.79□□□□□ -1.32
PKNOX1-206ENST00000480179 R4GN34 69 aa6.75□□□□□ -1.33
PKNOX1-206ENST00000480179 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
PKNOX1-206ENST00000480179 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
PKNOX1-206ENST00000480179 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
PKNOX1-206ENST00000480179 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
PKNOX1-206ENST00000480179 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
PKNOX1-206ENST00000480179 ROMO1P60602 79 aa6.56□□□□□ -1.36
PKNOX1-206ENST00000480179 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
PKNOX1-206ENST00000480179 MT2AP02795 61 aa6.48□□□□□ -1.37
PKNOX1-206ENST00000480179 MT1FP04733 61 aa6.46□□□□□ -1.38
PKNOX1-206ENST00000480179 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
PKNOX1-206ENST00000480179 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
PKNOX1-206ENST00000480179 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
PKNOX1-206ENST00000480179 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
PKNOX1-206ENST00000480179 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
PKNOX1-206ENST00000480179 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
PKNOX1-206ENST00000480179 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
PKNOX1-206ENST00000480179 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
PKNOX1-206ENST00000480179 USH2AO75445 5202 aa6.35□□□□□ -1.39
PKNOX1-206ENST00000480179 SSPOA2VEC9 5147 aa6.35□□□□□ -1.39
PKNOX1-206ENST00000480179 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
PKNOX1-206ENST00000480179 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
PKNOX1-206ENST00000480179 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
PKNOX1-206ENST00000480179 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
PKNOX1-206ENST00000480179 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
PKNOX1-206ENST00000480179 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
PKNOX1-206ENST00000480179 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
PKNOX1-206ENST00000480179 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
PKNOX1-206ENST00000480179 MT1BP07438 61 aa6.14□□□□□ -1.43
PKNOX1-206ENST00000480179 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
PKNOX1-206ENST00000480179 TNP1P09430 55 aa6.06□□□□□ -1.44
PKNOX1-206ENST00000480179 MT1XP80297 61 aa5.99□□□□□ -1.45
PKNOX1-206ENST00000480179 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
PKNOX1-206ENST00000480179 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.45
PKNOX1-206ENST00000480179 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
PKNOX1-206ENST00000480179 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
PKNOX1-206ENST00000480179 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
PKNOX1-206ENST00000480179 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
PKNOX1-206ENST00000480179 H3BS24 57 aa5.85□□□□□ -1.47
PKNOX1-206ENST00000480179 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
PKNOX1-206ENST00000480179 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
PKNOX1-206ENST00000480179 NEBP20929 6669 aa5.79□□□□□ -1.48
PKNOX1-206ENST00000480179 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
PKNOX1-206ENST00000480179 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
PKNOX1-206ENST00000480179 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
PKNOX1-206ENST00000480179 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
PKNOX1-206ENST00000480179 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
PKNOX1-206ENST00000480179 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
PKNOX1-206ENST00000480179 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms