RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
C9orf78-205ENST00000480023 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
C9orf78-205ENST00000480023 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
C9orf78-205ENST00000480023 S4R3F8 94 aa6.88□□□□□ -1.31
C9orf78-205ENST00000480023 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
C9orf78-205ENST00000480023 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
C9orf78-205ENST00000480023 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
C9orf78-205ENST00000480023 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
C9orf78-205ENST00000480023 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
C9orf78-205ENST00000480023 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
C9orf78-205ENST00000480023 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
C9orf78-205ENST00000480023 FAT1Q14517 4588 aa6.78□□□□□ -1.32
C9orf78-205ENST00000480023 XP32Q5T750 250 aa6.77□□□□□ -1.33
C9orf78-205ENST00000480023 DNHD1Q96M86 4753 aa6.73□□□□□ -1.33
C9orf78-205ENST00000480023 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
C9orf78-205ENST00000480023 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
C9orf78-205ENST00000480023 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
C9orf78-205ENST00000480023 M0QZ58 72 aa6.68□□□□□ -1.34
C9orf78-205ENST00000480023 TNXBP22105 4242 aa6.67□□□□□ -1.34
C9orf78-205ENST00000480023 HSPG2P98160 4391 aa6.66□□□□□ -1.34
C9orf78-205ENST00000480023 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
C9orf78-205ENST00000480023 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
C9orf78-205ENST00000480023 Q5VSD8 79 aa6.39□□□□□ -1.39
C9orf78-205ENST00000480023 R4GN34 69 aa6.38□□□□□ -1.39
C9orf78-205ENST00000480023 LPAP08519 4548 aa6.34□□□□□ -1.39
C9orf78-205ENST00000480023 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
C9orf78-205ENST00000480023 RYR2Q92736 4967 aa6.32□□□□□ -1.4
C9orf78-205ENST00000480023 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
C9orf78-205ENST00000480023 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
C9orf78-205ENST00000480023 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
C9orf78-205ENST00000480023 LRP2P98164 4655 aa6.27□□□□□ -1.41
C9orf78-205ENST00000480023 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
C9orf78-205ENST00000480023 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
C9orf78-205ENST00000480023 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
C9orf78-205ENST00000480023 KRTAP21-3Q3LHN1 58 aa6.19□□□□□ -1.42
C9orf78-205ENST00000480023 RYR1P21817 5038 aa6.17□□□□□ -1.42
C9orf78-205ENST00000480023 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
C9orf78-205ENST00000480023 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
C9orf78-205ENST00000480023 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
C9orf78-205ENST00000480023 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
C9orf78-205ENST00000480023 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
C9orf78-205ENST00000480023 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
C9orf78-205ENST00000480023 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
C9orf78-205ENST00000480023 RYR3Q15413 4870 aa5.97□□□□□ -1.45
C9orf78-205ENST00000480023 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.45
C9orf78-205ENST00000480023 TNP1P09430 55 aa5.94□□□□□ -1.46
C9orf78-205ENST00000480023 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
C9orf78-205ENST00000480023 J3QL48 77 aa5.74□□□□□ -1.49
C9orf78-205ENST00000480023 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
C9orf78-205ENST00000480023 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
C9orf78-205ENST00000480023 HERC1Q15751 4861 aa5.7□□□□□ -1.5
C9orf78-205ENST00000480023 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
C9orf78-205ENST00000480023 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
C9orf78-205ENST00000480023 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
C9orf78-205ENST00000480023 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
C9orf78-205ENST00000480023 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
C9orf78-205ENST00000480023 INE1O15225 51 aa5.56□□□□□ -1.52
C9orf78-205ENST00000480023 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
C9orf78-205ENST00000480023 MUC2Q02817 5179 aa5.51□□□□□ -1.53
C9orf78-205ENST00000480023 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
C9orf78-205ENST00000480023 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
C9orf78-205ENST00000480023 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
C9orf78-205ENST00000480023 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
C9orf78-205ENST00000480023 HERC2O95714 4834 aa5.41□□□□□ -1.54
C9orf78-205ENST00000480023 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
C9orf78-205ENST00000480023 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
C9orf78-205ENST00000480023 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
C9orf78-205ENST00000480023 MT1FP04733 61 aa5.27□□□□□ -1.57
C9orf78-205ENST00000480023 MT2AP02795 61 aa5.27□□□□□ -1.57
C9orf78-205ENST00000480023 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
C9orf78-205ENST00000480023 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
C9orf78-205ENST00000480023 MT1HP80294 61 aa5.25□□□□□ -1.57
C9orf78-205ENST00000480023 MT1XP80297 61 aa5.25□□□□□ -1.57
C9orf78-205ENST00000480023 M0R2T5 61 aa5.23□□□□□ -1.57
C9orf78-205ENST00000480023 KRTAP10-10P60014 251 aa5.23□□□□□ -1.57
C9orf78-205ENST00000480023 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
C9orf78-205ENST00000480023 MT1BP07438 61 aa5.2□□□□□ -1.58
C9orf78-205ENST00000480023 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
C9orf78-205ENST00000480023 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
C9orf78-205ENST00000480023 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
C9orf78-205ENST00000480023 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
C9orf78-205ENST00000480023 KRTAP9-3Q9BYQ3 159 aa4.97□□□□□ -1.61
C9orf78-205ENST00000480023 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
C9orf78-205ENST00000480023 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
C9orf78-205ENST00000480023 LCE2BO14633 110 aa4.87□□□□□ -1.63
C9orf78-205ENST00000480023 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
C9orf78-205ENST00000480023 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
C9orf78-205ENST00000480023 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
C9orf78-205ENST00000480023 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
C9orf78-205ENST00000480023 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
C9orf78-205ENST00000480023 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
C9orf78-205ENST00000480023 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
C9orf78-205ENST00000480023 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
C9orf78-205ENST00000480023 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
C9orf78-205ENST00000480023 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
C9orf78-205ENST00000480023 KMT2DO14686 5537 aa4.59□□□□□ -1.67
C9orf78-205ENST00000480023 MT1LQ93083 61 aa4.57□□□□□ -1.68
C9orf78-205ENST00000480023 MT1EP04732 61 aa4.51□□□□□ -1.69
C9orf78-205ENST00000480023 USH2AO75445 5202 aa4.48□□□□□ -1.69
C9orf78-205ENST00000480023 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 499.3 ms