RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 ATOX1O00244 68 aa4.82□□□□□ -1.64
CD46-214ENST00000480003 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
CD46-214ENST00000480003 SMIM20Q8N5G0 67 aa4.81□□□□□ -1.64
CD46-214ENST00000480003 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
CD46-214ENST00000480003 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
CD46-214ENST00000480003 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
CD46-214ENST00000480003 H3BPC8 53 aa4.79□□□□□ -1.64
CD46-214ENST00000480003 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
CD46-214ENST00000480003 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
CD46-214ENST00000480003 MP68P56378 58 aa4.78□□□□□ -1.64
CD46-214ENST00000480003 MT1HP80294 61 aa4.78□□□□□ -1.64
CD46-214ENST00000480003 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
CD46-214ENST00000480003 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
CD46-214ENST00000480003 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
CD46-214ENST00000480003 FAM236DA0A1B0GTK5 79 aa4.75□□□□□ -1.65
CD46-214ENST00000480003 FAM236CP0DP71 79 aa4.75□□□□□ -1.65
CD46-214ENST00000480003 KLKP1Q107X0 134 aa4.74□□□□□ -1.65
CD46-214ENST00000480003 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
CD46-214ENST00000480003 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
CD46-214ENST00000480003 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
CD46-214ENST00000480003 COX7CP15954 63 aa4.68□□□□□ -1.66
CD46-214ENST00000480003 C20orf197Q8N268 126 aa4.66□□□□□ -1.66
CD46-214ENST00000480003 SNURFQ9Y675 71 aa4.66□□□□□ -1.66
CD46-214ENST00000480003 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
CD46-214ENST00000480003 M0R2T5 61 aa4.64□□□□□ -1.67
CD46-214ENST00000480003 A8MUN3 132 aa4.63□□□□□ -1.67
CD46-214ENST00000480003 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
CD46-214ENST00000480003 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
CD46-214ENST00000480003 LCA10Q71F78 164 aa4.59□□□□□ -1.67
CD46-214ENST00000480003 S4R3F8 94 aa4.59□□□□□ -1.67
CD46-214ENST00000480003 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
CD46-214ENST00000480003 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
CD46-214ENST00000480003 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
CD46-214ENST00000480003 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
CD46-214ENST00000480003 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
CD46-214ENST00000480003 H7BZZ5 65 aa4.55□□□□□ -1.68
CD46-214ENST00000480003 NDUFC1O43677 76 aa4.55□□□□□ -1.68
CD46-214ENST00000480003 ACYP2P14621 99 aa4.55□□□□□ -1.68
CD46-214ENST00000480003 MT2AP02795 61 aa4.53□□□□□ -1.68
CD46-214ENST00000480003 MT1FP04733 61 aa4.49□□□□□ -1.69
CD46-214ENST00000480003 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
CD46-214ENST00000480003 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
CD46-214ENST00000480003 H0YAA0 97 aa4.44□□□□□ -1.7
CD46-214ENST00000480003 COA5Q86WW8 74 aa4.42□□□□□ -1.7
CD46-214ENST00000480003 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
CD46-214ENST00000480003 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
CD46-214ENST00000480003 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
CD46-214ENST00000480003 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
CD46-214ENST00000480003 TMEM258P61165 79 aa4.37□□□□□ -1.71
CD46-214ENST00000480003 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
CD46-214ENST00000480003 PCP4P48539 62 aa4.36□□□□□ -1.71
CD46-214ENST00000480003 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
CD46-214ENST00000480003 P0C880 135 aa4.33□□□□□ -1.72
CD46-214ENST00000480003 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
CD46-214ENST00000480003 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
CD46-214ENST00000480003 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
CD46-214ENST00000480003 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
CD46-214ENST00000480003 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
CD46-214ENST00000480003 USH2AO75445 5202 aa4.25□□□□□ -1.73
CD46-214ENST00000480003 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
CD46-214ENST00000480003 MT1BP07438 61 aa4.22□□□□□ -1.73
CD46-214ENST00000480003 R4GN34 69 aa4.22□□□□□ -1.73
CD46-214ENST00000480003 M0QZ58 72 aa4.2□□□□□ -1.74
CD46-214ENST00000480003 MT3P25713 68 aa4.2□□□□□ -1.74
CD46-214ENST00000480003 SEC61GP60059 68 aa4.2□□□□□ -1.74
CD46-214ENST00000480003 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
CD46-214ENST00000480003 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
CD46-214ENST00000480003 Q5VV11 94 aa4.18□□□□□ -1.74
CD46-214ENST00000480003 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
CD46-214ENST00000480003 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
CD46-214ENST00000480003 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
CD46-214ENST00000480003 A0A1B0GU69 56 aa4.16□□□□□ -1.74
CD46-214ENST00000480003 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
CD46-214ENST00000480003 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
CD46-214ENST00000480003 A0A1B0GU33 70 aa4.14□□□□□ -1.75
CD46-214ENST00000480003 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
CD46-214ENST00000480003 Q1T7F1 81 aa4.11□□□□□ -1.75
CD46-214ENST00000480003 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
CD46-214ENST00000480003 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
CD46-214ENST00000480003 A6NN06 94 aa4.09□□□□□ -1.75
CD46-214ENST00000480003 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
CD46-214ENST00000480003 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
CD46-214ENST00000480003 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
CD46-214ENST00000480003 V9GYY9 64 aa4.08□□□□□ -1.76
CD46-214ENST00000480003 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
CD46-214ENST00000480003 A0A0D9SG42 100 aa4.01□□□□□ -1.77
CD46-214ENST00000480003 PSPHP1O15172 72 aa4.01□□□□□ -1.77
CD46-214ENST00000480003 MT1XP80297 61 aa4.01□□□□□ -1.77
CD46-214ENST00000480003 UQCR11O14957 56 aa4□□□□□ -1.77
CD46-214ENST00000480003 A8MU10 97 aa3.99□□□□□ -1.77
CD46-214ENST00000480003 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
CD46-214ENST00000480003 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
CD46-214ENST00000480003 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
CD46-214ENST00000480003 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
CD46-214ENST00000480003 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
CD46-214ENST00000480003 NEBP20929 6669 aa3.93□□□□□ -1.78
CD46-214ENST00000480003 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
CD46-214ENST00000480003 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CD46-214ENST00000480003 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
CD46-214ENST00000480003 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms