RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 HERC2O95714 4834 aa2.77□□□□□ -1.97
COMMD3-212ENST00000479958 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
COMMD3-212ENST00000479958 hDV103S1A0JD37 113 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 SPAG11AQ6PDA7 123 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 C20orf197Q8N268 126 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 LIMD2Q9BT23 127 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
COMMD3-212ENST00000479958 UQCRQO14949 82 aa2.76□□□□□ -1.97
COMMD3-212ENST00000479958 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
COMMD3-212ENST00000479958 C9orf92A6NGG3 77 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 NDUFS5O43920 106 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 LINC00313P59037 77 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
COMMD3-212ENST00000479958 C5orf47Q569G3 176 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 Q5W150 140 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 SMIM20Q8N5G0 67 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
COMMD3-212ENST00000479958 MRPL34Q9BQ48 92 aaKnown RBP2.74□□□□□ -1.97
COMMD3-212ENST00000479958 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
COMMD3-212ENST00000479958 H0Y9P7 68 aa2.72□□□□□ -1.97
COMMD3-212ENST00000479958 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
COMMD3-212ENST00000479958 LINC00208Q96KT6 92 aa2.71□□□□□ -1.98
COMMD3-212ENST00000479958 H7BZZ5 65 aa2.7□□□□□ -1.98
COMMD3-212ENST00000479958 KLKP1Q107X0 134 aa2.7□□□□□ -1.98
COMMD3-212ENST00000479958 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
COMMD3-212ENST00000479958 OXTP01178 125 aa2.69□□□□□ -1.98
COMMD3-212ENST00000479958 C1orf64Q8NEQ6 169 aa2.69□□□□□ -1.98
COMMD3-212ENST00000479958 TRAV22A0A0B4J277 110 aa2.68□□□□□ -1.98
COMMD3-212ENST00000479958 TP53AIP1Q9HCN2 124 aa2.68□□□□□ -1.98
COMMD3-212ENST00000479958 MP68P56378 58 aa2.68□□□□□ -1.98
COMMD3-212ENST00000479958 PCOTHQ58A44 107 aa2.68□□□□□ -1.98
COMMD3-212ENST00000479958 A8MUU9 505 aa2.67□□□□□ -1.98
COMMD3-212ENST00000479958 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
COMMD3-212ENST00000479958 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
COMMD3-212ENST00000479958 H3BPC8 53 aa2.65□□□□□ -1.99
COMMD3-212ENST00000479958 TMEM258P61165 79 aa2.65□□□□□ -1.99
COMMD3-212ENST00000479958 FP248Q71RG6 208 aaPredicted RBP2.65□□□□□ -1.99
COMMD3-212ENST00000479958 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
COMMD3-212ENST00000479958 LPAP08519 4548 aa2.64□□□□□ -1.99
COMMD3-212ENST00000479958 FAM236DA0A1B0GTK5 79 aa2.64□□□□□ -1.99
COMMD3-212ENST00000479958 FAM236CP0DP71 79 aa2.64□□□□□ -1.99
COMMD3-212ENST00000479958 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
COMMD3-212ENST00000479958 NDUFC1O43677 76 aa2.63□□□□□ -1.99
COMMD3-212ENST00000479958 LOC101927531A0A1B0GV80 90 aa2.62□□□□□ -1.99
COMMD3-212ENST00000479958 HRES1P13985 223 aa2.62□□□□□ -1.99
COMMD3-212ENST00000479958 LRP2P98164 4655 aa2.62□□□□□ -1.99
COMMD3-212ENST00000479958 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
COMMD3-212ENST00000479958 HERC1Q15751 4861 aa2.59□□□□□ -1.99
COMMD3-212ENST00000479958 SPINK7P58062 85 aa2.59□□□□□ -2
COMMD3-212ENST00000479958 TPRXLQ17RH7 258 aa2.59□□□□□ -2
COMMD3-212ENST00000479958 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -2
COMMD3-212ENST00000479958 SERP1Q9Y6X1 66 aa2.59□□□□□ -2
COMMD3-212ENST00000479958 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
COMMD3-212ENST00000479958 C4orf26Q17RF5 130 aa2.58□□□□□ -2
COMMD3-212ENST00000479958 ATP11AUNQ6ZP68 121 aa2.58□□□□□ -2
COMMD3-212ENST00000479958 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
COMMD3-212ENST00000479958 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
COMMD3-212ENST00000479958 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
COMMD3-212ENST00000479958 KRTAP4-1Q9BYQ7 146 aa2.57□□□□□ -2
COMMD3-212ENST00000479958 COA5Q86WW8 74 aa2.56□□□□□ -2
COMMD3-212ENST00000479958 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
COMMD3-212ENST00000479958 DMAC1Q96GE9 116 aa2.55□□□□□ -2
COMMD3-212ENST00000479958 MUC17Q685J3 4493 aa2.55□□□□□ -2
COMMD3-212ENST00000479958 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
COMMD3-212ENST00000479958 ACYP2P14621 99 aa2.51□□□□□ -2.01
COMMD3-212ENST00000479958 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
COMMD3-212ENST00000479958 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
COMMD3-212ENST00000479958 CHKB-CPT1BH3BT56 60 aa2.48□□□□□ -2.01
COMMD3-212ENST00000479958 RNF213Q63HN8 5207 aa2.47□□□□□ -2.01
COMMD3-212ENST00000479958 A8MUN3 132 aa2.47□□□□□ -2.01
COMMD3-212ENST00000479958 Q1T7F1 81 aa2.47□□□□□ -2.01
COMMD3-212ENST00000479958 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
COMMD3-212ENST00000479958 PSPHP1O15172 72 aa2.46□□□□□ -2.02
COMMD3-212ENST00000479958 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
COMMD3-212ENST00000479958 LCA10Q71F78 164 aa2.45□□□□□ -2.02
COMMD3-212ENST00000479958 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
COMMD3-212ENST00000479958 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
COMMD3-212ENST00000479958 MUC2Q02817 5179 aa2.44□□□□□ -2.02
COMMD3-212ENST00000479958 Q5VV11 94 aa2.43□□□□□ -2.02
COMMD3-212ENST00000479958 S4R3F8 94 aa2.43□□□□□ -2.02
COMMD3-212ENST00000479958 RBM12B-AS1Q9P1G2 102 aa2.42□□□□□ -2.02
COMMD3-212ENST00000479958 FLGP20930 4061 aaPredicted RBP2.42□□□□□ -2.02
COMMD3-212ENST00000479958 V9GYY9 64 aa2.4□□□□□ -2.03
COMMD3-212ENST00000479958 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
COMMD3-212ENST00000479958 SPTSSBQ8NFR3 76 aa2.39□□□□□ -2.03
COMMD3-212ENST00000479958 A0A1B0GU69 56 aa2.38□□□□□ -2.03
COMMD3-212ENST00000479958 P0C880 135 aa2.37□□□□□ -2.03
COMMD3-212ENST00000479958 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
COMMD3-212ENST00000479958 A6NED7 52 aa2.35□□□□□ -2.03
COMMD3-212ENST00000479958 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
COMMD3-212ENST00000479958 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
COMMD3-212ENST00000479958 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
COMMD3-212ENST00000479958 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
COMMD3-212ENST00000479958 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
COMMD3-212ENST00000479958 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
COMMD3-212ENST00000479958 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.04
COMMD3-212ENST00000479958 A0A1B0GU33 70 aa2.33□□□□□ -2.04
COMMD3-212ENST00000479958 H0YAA0 97 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms