RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 M0R2T5 61 aa6.09□□□□□ -1.43
TRAPPC12-218ENST00000479897 LCA10Q71F78 164 aa6.06□□□□□ -1.44
TRAPPC12-218ENST00000479897 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC12-218ENST00000479897 ACYP2P14621 99 aa6.04□□□□□ -1.44
TRAPPC12-218ENST00000479897 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC12-218ENST00000479897 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
TRAPPC12-218ENST00000479897 CSAG1Q6PB30 78 aa6□□□□□ -1.45
TRAPPC12-218ENST00000479897 ATP5EP56381 51 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC12-218ENST00000479897 TMEM258P61165 79 aa5.96□□□□□ -1.46
TRAPPC12-218ENST00000479897 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
TRAPPC12-218ENST00000479897 CHKB-CPT1BH3BT56 60 aa5.92□□□□□ -1.46
TRAPPC12-218ENST00000479897 COA5Q86WW8 74 aa5.92□□□□□ -1.46
TRAPPC12-218ENST00000479897 MT2AP02795 61 aa5.91□□□□□ -1.46
TRAPPC12-218ENST00000479897 H0YAA0 97 aa5.9□□□□□ -1.46
TRAPPC12-218ENST00000479897 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
TRAPPC12-218ENST00000479897 MT1FP04733 61 aa5.86□□□□□ -1.47
TRAPPC12-218ENST00000479897 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
TRAPPC12-218ENST00000479897 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC12-218ENST00000479897 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
TRAPPC12-218ENST00000479897 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
TRAPPC12-218ENST00000479897 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
TRAPPC12-218ENST00000479897 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
TRAPPC12-218ENST00000479897 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
TRAPPC12-218ENST00000479897 P0C880 135 aa5.7□□□□□ -1.5
TRAPPC12-218ENST00000479897 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
TRAPPC12-218ENST00000479897 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
TRAPPC12-218ENST00000479897 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
TRAPPC12-218ENST00000479897 SEC61GP60059 68 aa5.64□□□□□ -1.51
TRAPPC12-218ENST00000479897 LCE2BO14633 110 aa5.63□□□□□ -1.51
TRAPPC12-218ENST00000479897 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
TRAPPC12-218ENST00000479897 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
TRAPPC12-218ENST00000479897 R4GN34 69 aa5.61□□□□□ -1.51
TRAPPC12-218ENST00000479897 A0A1B0GU69 56 aa5.59□□□□□ -1.51
TRAPPC12-218ENST00000479897 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
TRAPPC12-218ENST00000479897 M0QZ58 72 aa5.57□□□□□ -1.52
TRAPPC12-218ENST00000479897 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
TRAPPC12-218ENST00000479897 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
TRAPPC12-218ENST00000479897 V9GYY9 64 aa5.55□□□□□ -1.52
TRAPPC12-218ENST00000479897 USH2AO75445 5202 aa5.55□□□□□ -1.52
TRAPPC12-218ENST00000479897 Q5VV11 94 aa5.54□□□□□ -1.52
TRAPPC12-218ENST00000479897 Q1T7F1 81 aa5.53□□□□□ -1.52
TRAPPC12-218ENST00000479897 A0A1B0GU33 70 aa5.51□□□□□ -1.53
TRAPPC12-218ENST00000479897 MT1BP07438 61 aa5.5□□□□□ -1.53
TRAPPC12-218ENST00000479897 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
TRAPPC12-218ENST00000479897 A6NN06 94 aa5.45□□□□□ -1.54
TRAPPC12-218ENST00000479897 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
TRAPPC12-218ENST00000479897 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
TRAPPC12-218ENST00000479897 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
TRAPPC12-218ENST00000479897 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
TRAPPC12-218ENST00000479897 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
TRAPPC12-218ENST00000479897 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.54
TRAPPC12-218ENST00000479897 UQCR11O14957 56 aa5.39□□□□□ -1.55
TRAPPC12-218ENST00000479897 PSPHP1O15172 72 aa5.39□□□□□ -1.55
TRAPPC12-218ENST00000479897 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
TRAPPC12-218ENST00000479897 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
TRAPPC12-218ENST00000479897 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
TRAPPC12-218ENST00000479897 A0A0D9SG42 100 aa5.32□□□□□ -1.56
TRAPPC12-218ENST00000479897 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
TRAPPC12-218ENST00000479897 A8MU10 97 aa5.29□□□□□ -1.56
TRAPPC12-218ENST00000479897 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
TRAPPC12-218ENST00000479897 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
TRAPPC12-218ENST00000479897 MT1XP80297 61 aa5.26□□□□□ -1.57
TRAPPC12-218ENST00000479897 A6NED7 52 aa5.25□□□□□ -1.57
TRAPPC12-218ENST00000479897 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
TRAPPC12-218ENST00000479897 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC12-218ENST00000479897 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
TRAPPC12-218ENST00000479897 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
TRAPPC12-218ENST00000479897 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
TRAPPC12-218ENST00000479897 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
TRAPPC12-218ENST00000479897 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
TRAPPC12-218ENST00000479897 K7ERS5 55 aa5.11□□□□□ -1.59
TRAPPC12-218ENST00000479897 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
TRAPPC12-218ENST00000479897 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC12-218ENST00000479897 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
TRAPPC12-218ENST00000479897 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
TRAPPC12-218ENST00000479897 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
TRAPPC12-218ENST00000479897 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
TRAPPC12-218ENST00000479897 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
TRAPPC12-218ENST00000479897 TNP1P09430 55 aa4.92□□□□□ -1.62
TRAPPC12-218ENST00000479897 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
TRAPPC12-218ENST00000479897 KMT2DO14686 5537 aa4.87□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
TRAPPC12-218ENST00000479897 ROMO1P60602 79 aa4.85□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
TRAPPC12-218ENST00000479897 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
TRAPPC12-218ENST00000479897 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
TRAPPC12-218ENST00000479897 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
TRAPPC12-218ENST00000479897 H3BS24 57 aa4.75□□□□□ -1.65
TRAPPC12-218ENST00000479897 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
TRAPPC12-218ENST00000479897 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
TRAPPC12-218ENST00000479897 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
TRAPPC12-218ENST00000479897 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
TRAPPC12-218ENST00000479897 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
TRAPPC12-218ENST00000479897 MT1EP04732 61 aa4.64□□□□□ -1.67
TRAPPC12-218ENST00000479897 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
TRAPPC12-218ENST00000479897 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
TRAPPC12-218ENST00000479897 MDN1Q9NU22 5596 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms