RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 PDE6GP18545 87 aa7.19□□□□□ -1.26
HMGN1-212ENST00000479586 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
HMGN1-212ENST00000479586 CXCL6P80162 114 aa7.14□□□□□ -1.27
HMGN1-212ENST00000479586 Q8N9L7 120 aa7.12□□□□□ -1.27
HMGN1-212ENST00000479586 ATXN8Q156A1 80 aa7.1□□□□□ -1.27
HMGN1-212ENST00000479586 BPY2O14599 106 aa7.09□□□□□ -1.27
HMGN1-212ENST00000479586 A0A087WVE0 104 aa7.08□□□□□ -1.28
HMGN1-212ENST00000479586 A8MUN3 132 aa7.04□□□□□ -1.28
HMGN1-212ENST00000479586 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
HMGN1-212ENST00000479586 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
HMGN1-212ENST00000479586 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
HMGN1-212ENST00000479586 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
HMGN1-212ENST00000479586 H0YAA0 97 aa6.97□□□□□ -1.29
HMGN1-212ENST00000479586 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-212ENST00000479586 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
HMGN1-212ENST00000479586 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
HMGN1-212ENST00000479586 UQCR10Q9UDW1 63 aa6.91□□□□□ -1.3
HMGN1-212ENST00000479586 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
HMGN1-212ENST00000479586 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
HMGN1-212ENST00000479586 PYY3Q5JQD4 70 aa6.87□□□□□ -1.31
HMGN1-212ENST00000479586 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
HMGN1-212ENST00000479586 NDUFC1O43677 76 aa6.85□□□□□ -1.31
HMGN1-212ENST00000479586 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
HMGN1-212ENST00000479586 AHNAK2Q8IVF2 5795 aa6.8□□□□□ -1.32
HMGN1-212ENST00000479586 K7EP34 96 aa6.79□□□□□ -1.32
HMGN1-212ENST00000479586 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
HMGN1-212ENST00000479586 R4GN34 69 aa6.78□□□□□ -1.32
HMGN1-212ENST00000479586 TSTD3H0UI37 97 aa6.73□□□□□ -1.33
HMGN1-212ENST00000479586 H3BT86 120 aa6.73□□□□□ -1.33
HMGN1-212ENST00000479586 M0QZ58 72 aa6.71□□□□□ -1.34
HMGN1-212ENST00000479586 P0C880 135 aa6.7□□□□□ -1.34
HMGN1-212ENST00000479586 M0R143 59 aa6.68□□□□□ -1.34
HMGN1-212ENST00000479586 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
HMGN1-212ENST00000479586 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
HMGN1-212ENST00000479586 SMIM6P0DI80 62 aa6.66□□□□□ -1.34
HMGN1-212ENST00000479586 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.34
HMGN1-212ENST00000479586 LOC105371267A0A1B0GV96 52 aa6.65□□□□□ -1.34
HMGN1-212ENST00000479586 UBL5Q9BZL1 73 aa6.65□□□□□ -1.34
HMGN1-212ENST00000479586 MT4P47944 62 aa6.62□□□□□ -1.35
HMGN1-212ENST00000479586 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
HMGN1-212ENST00000479586 TRAV22A0A0B4J277 110 aa6.61□□□□□ -1.35
HMGN1-212ENST00000479586 ACYP1P07311 99 aa6.59□□□□□ -1.35
HMGN1-212ENST00000479586 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
HMGN1-212ENST00000479586 C20orf197Q8N268 126 aa6.58□□□□□ -1.36
HMGN1-212ENST00000479586 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
HMGN1-212ENST00000479586 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
HMGN1-212ENST00000479586 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
HMGN1-212ENST00000479586 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
HMGN1-212ENST00000479586 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
HMGN1-212ENST00000479586 MT1EP04732 61 aa6.49□□□□□ -1.37
HMGN1-212ENST00000479586 A0A1W2PPM0 123 aa6.48□□□□□ -1.37
HMGN1-212ENST00000479586 BATFQ16520 125 aa6.47□□□□□ -1.37
HMGN1-212ENST00000479586 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
HMGN1-212ENST00000479586 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
HMGN1-212ENST00000479586 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
HMGN1-212ENST00000479586 H0Y9P7 68 aa6.42□□□□□ -1.38
HMGN1-212ENST00000479586 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
HMGN1-212ENST00000479586 ATOX1O00244 68 aa6.38□□□□□ -1.39
HMGN1-212ENST00000479586 MT-ATP8P03928 68 aa6.36□□□□□ -1.39
HMGN1-212ENST00000479586 UQCRQO14949 82 aa6.35□□□□□ -1.39
HMGN1-212ENST00000479586 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
HMGN1-212ENST00000479586 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
HMGN1-212ENST00000479586 MT1GP13640 62 aa6.31□□□□□ -1.4
HMGN1-212ENST00000479586 COL5A1-AS1Q5SY13 56 aa6.29□□□□□ -1.4
HMGN1-212ENST00000479586 PRO0461Q9UI25 63 aa6.29□□□□□ -1.4
HMGN1-212ENST00000479586 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
HMGN1-212ENST00000479586 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
HMGN1-212ENST00000479586 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
HMGN1-212ENST00000479586 MT1MQ8N339 61 aa6.23□□□□□ -1.41
HMGN1-212ENST00000479586 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
HMGN1-212ENST00000479586 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
HMGN1-212ENST00000479586 DMAC1Q96GE9 116 aa6.15□□□□□ -1.42
HMGN1-212ENST00000479586 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
HMGN1-212ENST00000479586 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
HMGN1-212ENST00000479586 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
HMGN1-212ENST00000479586 MT1LQ93083 61 aa6.09□□□□□ -1.43
HMGN1-212ENST00000479586 MP68P56378 58 aa6.07□□□□□ -1.44
HMGN1-212ENST00000479586 A0A0D9SG42 100 aa6.05□□□□□ -1.44
HMGN1-212ENST00000479586 F8W1H4 67 aa6.04□□□□□ -1.44
HMGN1-212ENST00000479586 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
HMGN1-212ENST00000479586 ETDBQ3ZM63 59 aa6.03□□□□□ -1.44
HMGN1-212ENST00000479586 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
HMGN1-212ENST00000479586 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
HMGN1-212ENST00000479586 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
HMGN1-212ENST00000479586 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
HMGN1-212ENST00000479586 A0A1B0GV90 55 aa5.97□□□□□ -1.45
HMGN1-212ENST00000479586 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
HMGN1-212ENST00000479586 H3BPC8 53 aa5.87□□□□□ -1.47
HMGN1-212ENST00000479586 ACYP2P14621 99 aa5.84□□□□□ -1.47
HMGN1-212ENST00000479586 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
HMGN1-212ENST00000479586 J3QR89 54 aa5.83□□□□□ -1.48
HMGN1-212ENST00000479586 AHNAKQ09666 5890 aaKnown RBP5.83□□□□□ -1.48
HMGN1-212ENST00000479586 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
HMGN1-212ENST00000479586 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-212ENST00000479586 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
HMGN1-212ENST00000479586 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
HMGN1-212ENST00000479586 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
HMGN1-212ENST00000479586 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
HMGN1-212ENST00000479586 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
HMGN1-212ENST00000479586 K7ERU9 68 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms