RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TP53AIP1Q9HCN2 124 aa7.74□□□□□ -1.17
ECHDC1-216ENST00000479525 KLKP1Q107X0 134 aa7.71□□□□□ -1.17
ECHDC1-216ENST00000479525 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
ECHDC1-216ENST00000479525 FAM240AA0A1B0GVK7 77 aa7.69□□□□□ -1.18
ECHDC1-216ENST00000479525 A0A1B0GV90 55 aa7.68□□□□□ -1.18
ECHDC1-216ENST00000479525 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
ECHDC1-216ENST00000479525 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
ECHDC1-216ENST00000479525 KRTAP9-9Q9BYP9 154 aa7.65□□□□□ -1.18
ECHDC1-216ENST00000479525 KRTAP9-4Q9BYQ2 154 aa7.65□□□□□ -1.18
ECHDC1-216ENST00000479525 TRAV22A0A0B4J277 110 aa7.64□□□□□ -1.19
ECHDC1-216ENST00000479525 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
ECHDC1-216ENST00000479525 ATP5EP2Q5VTU8 51 aa7.63□□□□□ -1.19
ECHDC1-216ENST00000479525 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-216ENST00000479525 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.2
ECHDC1-216ENST00000479525 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
ECHDC1-216ENST00000479525 H0Y9P7 68 aa7.56□□□□□ -1.2
ECHDC1-216ENST00000479525 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
ECHDC1-216ENST00000479525 UQCRQO14949 82 aa7.48□□□□□ -1.21
ECHDC1-216ENST00000479525 NDUFC1O43677 76 aa7.48□□□□□ -1.21
ECHDC1-216ENST00000479525 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
ECHDC1-216ENST00000479525 J3QR89 54 aa7.46□□□□□ -1.21
ECHDC1-216ENST00000479525 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.21
ECHDC1-216ENST00000479525 NEBP20929 6669 aa7.46□□□□□ -1.22
ECHDC1-216ENST00000479525 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
ECHDC1-216ENST00000479525 KRTAP5-9P26371 169 aa7.43□□□□□ -1.22
ECHDC1-216ENST00000479525 LINC00208Q96KT6 92 aa7.43□□□□□ -1.22
ECHDC1-216ENST00000479525 KMT2DO14686 5537 aa7.42□□□□□ -1.22
ECHDC1-216ENST00000479525 ATOX1O00244 68 aa7.42□□□□□ -1.22
ECHDC1-216ENST00000479525 KRTAP20-1Q3LI63 56 aa7.41□□□□□ -1.22
ECHDC1-216ENST00000479525 H0YAA0 97 aa7.38□□□□□ -1.23
ECHDC1-216ENST00000479525 A8MUN3 132 aa7.37□□□□□ -1.23
ECHDC1-216ENST00000479525 MDN1Q9NU22 5596 aa7.37□□□□□ -1.23
ECHDC1-216ENST00000479525 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
ECHDC1-216ENST00000479525 MT1XP80297 61 aa7.33□□□□□ -1.24
ECHDC1-216ENST00000479525 MP68P56378 58 aa7.32□□□□□ -1.24
ECHDC1-216ENST00000479525 P0C880 135 aa7.3□□□□□ -1.24
ECHDC1-216ENST00000479525 SCGB1A1P11684 91 aa7.28□□□□□ -1.24
ECHDC1-216ENST00000479525 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
ECHDC1-216ENST00000479525 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
ECHDC1-216ENST00000479525 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
ECHDC1-216ENST00000479525 R4GN34 69 aa7.23□□□□□ -1.25
ECHDC1-216ENST00000479525 K7ERU9 68 aa7.22□□□□□ -1.25
ECHDC1-216ENST00000479525 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
ECHDC1-216ENST00000479525 M0QZ58 72 aa7.21□□□□□ -1.25
ECHDC1-216ENST00000479525 SPRR2EP22531 72 aa7.21□□□□□ -1.25
ECHDC1-216ENST00000479525 SPRR2BP35325 72 aa7.21□□□□□ -1.25
ECHDC1-216ENST00000479525 SPRR2AP35326 72 aa7.21□□□□□ -1.25
ECHDC1-216ENST00000479525 H3BPC8 53 aa7.2□□□□□ -1.26
ECHDC1-216ENST00000479525 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
ECHDC1-216ENST00000479525 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
ECHDC1-216ENST00000479525 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
ECHDC1-216ENST00000479525 DMAC1Q96GE9 116 aa7.15□□□□□ -1.26
ECHDC1-216ENST00000479525 KRTAP4-2Q9BYR5 136 aa7.14□□□□□ -1.27
ECHDC1-216ENST00000479525 KRTAP2-3P0C7H8 128 aa7.12□□□□□ -1.27
ECHDC1-216ENST00000479525 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
ECHDC1-216ENST00000479525 KRTAP2-4Q9BYR9 128 aa7.12□□□□□ -1.27
ECHDC1-216ENST00000479525 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
ECHDC1-216ENST00000479525 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
ECHDC1-216ENST00000479525 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
ECHDC1-216ENST00000479525 LCE1AQ5T7P2 110 aa7.07□□□□□ -1.28
ECHDC1-216ENST00000479525 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
ECHDC1-216ENST00000479525 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-216ENST00000479525 SPRR2DP22532 72 aa6.95□□□□□ -1.3
ECHDC1-216ENST00000479525 ACYP2P14621 99 aa6.94□□□□□ -1.3
ECHDC1-216ENST00000479525 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
ECHDC1-216ENST00000479525 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
ECHDC1-216ENST00000479525 KRTAP10-12P60413 245 aa6.9□□□□□ -1.31
ECHDC1-216ENST00000479525 KRTAP2-2Q9BYT5 123 aa6.89□□□□□ -1.31
ECHDC1-216ENST00000479525 KRTAP2-1Q9BYU5 128 aa6.89□□□□□ -1.31
ECHDC1-216ENST00000479525 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
ECHDC1-216ENST00000479525 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
ECHDC1-216ENST00000479525 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
ECHDC1-216ENST00000479525 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
ECHDC1-216ENST00000479525 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
ECHDC1-216ENST00000479525 SPANXA2-OT1Q8N9U9 137 aa6.8□□□□□ -1.32
ECHDC1-216ENST00000479525 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
ECHDC1-216ENST00000479525 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
ECHDC1-216ENST00000479525 COX7CP15954 63 aa6.69□□□□□ -1.34
ECHDC1-216ENST00000479525 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.35
ECHDC1-216ENST00000479525 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
ECHDC1-216ENST00000479525 COA5Q86WW8 74 aa6.61□□□□□ -1.35
ECHDC1-216ENST00000479525 A0A0D9SG42 100 aa6.57□□□□□ -1.36
ECHDC1-216ENST00000479525 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
ECHDC1-216ENST00000479525 H7BZZ5 65 aa6.56□□□□□ -1.36
ECHDC1-216ENST00000479525 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
ECHDC1-216ENST00000479525 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
ECHDC1-216ENST00000479525 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
ECHDC1-216ENST00000479525 MT1EP04732 61 aa6.49□□□□□ -1.37
ECHDC1-216ENST00000479525 H3BS24 57 aa6.48□□□□□ -1.37
ECHDC1-216ENST00000479525 SEC61GP60059 68 aa6.47□□□□□ -1.37
ECHDC1-216ENST00000479525 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.37
ECHDC1-216ENST00000479525 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
ECHDC1-216ENST00000479525 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
ECHDC1-216ENST00000479525 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-216ENST00000479525 CCDC179H3BU77 68 aa6.4□□□□□ -1.39
ECHDC1-216ENST00000479525 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
ECHDC1-216ENST00000479525 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
ECHDC1-216ENST00000479525 A0A1B0GU33 70 aa6.35□□□□□ -1.39
ECHDC1-216ENST00000479525 A0A1B0GU69 56 aa6.29□□□□□ -1.4
ECHDC1-216ENST00000479525 A8MU10 97 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms