RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 ITPR3Q14573 2671 aa2.16□□□□□ -2.06
SSR1-207ENST00000479485 ABCA12Q86UK0 2595 aa2.16□□□□□ -2.06
SSR1-207ENST00000479485 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
SSR1-207ENST00000479485 UBR5O95071 2799 aaPredicted RBP2.15□□□□□ -2.06
SSR1-207ENST00000479485 HELZ2Q9BYK8 2649 aaKnown RBP2.15□□□□□ -2.06
SSR1-207ENST00000479485 FBN2P35556 2912 aa2.15□□□□□ -2.07
SSR1-207ENST00000479485 CCDC168Q8NDH2 2452 aa2.15□□□□□ -2.07
SSR1-207ENST00000479485 POLQO75417 2590 aa2.14□□□□□ -2.07
SSR1-207ENST00000479485 MUC3AQ02505 3323 aa2.14□□□□□ -2.07
SSR1-207ENST00000479485 INE1O15225 51 aa2.14□□□□□ -2.07
SSR1-207ENST00000479485 SMR3AQ99954 134 aa2.14□□□□□ -2.07
SSR1-207ENST00000479485 CSMD2Q7Z408 3487 aa2.14□□□□□ -2.07
SSR1-207ENST00000479485 ACANP16112 2415 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 FAM208BQ5VWN6 2430 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 FLNAP21333 2647 aaKnown RBP2.13□□□□□ -2.07
SSR1-207ENST00000479485 HECTD1Q9ULT8 2610 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 NIPBLQ6KC79 2804 aaeCLIP2.13□□□□□ -2.07
SSR1-207ENST00000479485 TENM4Q6N022 2769 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 SRRM2Q9UQ35 2752 aaKnown RBP2.13□□□□□ -2.07
SSR1-207ENST00000479485 DNAH3Q8TD57 4116 aa2.13□□□□□ -2.07
SSR1-207ENST00000479485 FASNP49327 2511 aaKnown RBP2.11□□□□□ -2.07
SSR1-207ENST00000479485 MYO18BQ8IUG5 2567 aa2.11□□□□□ -2.07
SSR1-207ENST00000479485 TRRAPQ9Y4A5 3859 aa2.11□□□□□ -2.07
SSR1-207ENST00000479485 C9orf92A6NGG3 77 aa2.1□□□□□ -2.07
SSR1-207ENST00000479485 ANK2Q01484 3957 aa2.09□□□□□ -2.07
SSR1-207ENST00000479485 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.07
SSR1-207ENST00000479485 J3QKU1 62 aa2.09□□□□□ -2.07
SSR1-207ENST00000479485 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
SSR1-207ENST00000479485 TGP01266 2768 aa2.08□□□□□ -2.08
SSR1-207ENST00000479485 FRAS1Q86XX4 4008 aa2.08□□□□□ -2.08
SSR1-207ENST00000479485 CACNA1AO00555 2505 aa2.07□□□□□ -2.08
SSR1-207ENST00000479485 FLNCQ14315 2725 aa2.06□□□□□ -2.08
SSR1-207ENST00000479485 VWFP04275 2813 aa2.06□□□□□ -2.08
SSR1-207ENST00000479485 MEGF8Q7Z7M0 2845 aa2.06□□□□□ -2.08
SSR1-207ENST00000479485 DNAH17Q9UFH2 4485 aa2.06□□□□□ -2.08
SSR1-207ENST00000479485 CUBNO60494 3623 aa2.06□□□□□ -2.08
SSR1-207ENST00000479485 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
SSR1-207ENST00000479485 LYSTQ99698 3801 aa2.05□□□□□ -2.08
SSR1-207ENST00000479485 TENM3Q9P273 2699 aa2.05□□□□□ -2.08
SSR1-207ENST00000479485 MAST4O15021 2626 aa2.04□□□□□ -2.08
SSR1-207ENST00000479485 COL6A5A8TX70 2615 aa2.04□□□□□ -2.08
SSR1-207ENST00000479485 PDZD2O15018 2839 aa2.04□□□□□ -2.08
SSR1-207ENST00000479485 PRKDCP78527 4128 aaKnown RBP2.04□□□□□ -2.08
SSR1-207ENST00000479485 TEP1Q99973 2627 aaKnown RBP2.04□□□□□ -2.08
SSR1-207ENST00000479485 R4GN34 69 aa2.04□□□□□ -2.08
SSR1-207ENST00000479485 NBEAL1Q6ZS30 2694 aa2.04□□□□□ -2.08
SSR1-207ENST00000479485 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
SSR1-207ENST00000479485 PKD1L1Q8TDX9 2849 aa2.03□□□□□ -2.08
SSR1-207ENST00000479485 DNAH7Q8WXX0 4024 aa2.03□□□□□ -2.08
SSR1-207ENST00000479485 STAB2Q8WWQ8 2551 aa2.03□□□□□ -2.08
SSR1-207ENST00000479485 CMYA5Q8N3K9 4069 aa2.03□□□□□ -2.08
SSR1-207ENST00000479485 DNAH6Q9C0G6 4158 aa2.02□□□□□ -2.09
SSR1-207ENST00000479485 DNAH2Q9P225 4427 aa2.02□□□□□ -2.09
SSR1-207ENST00000479485 ATRQ13535 2644 aa2.02□□□□□ -2.09
SSR1-207ENST00000479485 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
SSR1-207ENST00000479485 IGSF10Q6WRI0 2623 aa2.01□□□□□ -2.09
SSR1-207ENST00000479485 Q5VSD8 79 aa2.01□□□□□ -2.09
SSR1-207ENST00000479485 FBN1P35555 2871 aaKnown RBP2.01□□□□□ -2.09
SSR1-207ENST00000479485 ZNF469Q96JG9 3925 aaPredicted RBP2.01□□□□□ -2.09
SSR1-207ENST00000479485 DNAH11Q96DT5 4516 aa2□□□□□ -2.09
SSR1-207ENST00000479485 ITPR2Q14571 2701 aa2□□□□□ -2.09
SSR1-207ENST00000479485 CSMD3Q7Z407 3707 aa2□□□□□ -2.09
SSR1-207ENST00000479485 FLNBO75369 2602 aaKnown RBP2□□□□□ -2.09
SSR1-207ENST00000479485 TNP1P09430 55 aa1.98□□□□□ -2.09
SSR1-207ENST00000479485 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
SSR1-207ENST00000479485 DMBT1Q9UGM3 2413 aaPredicted RBP1.98□□□□□ -2.09
SSR1-207ENST00000479485 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
SSR1-207ENST00000479485 NOTCH1P46531 2555 aa1.98□□□□□ -2.09
SSR1-207ENST00000479485 USP24Q9UPU5 2620 aa1.97□□□□□ -2.09
SSR1-207ENST00000479485 NSD1Q96L73 2696 aaPredicted RBP1.96□□□□□ -2.1
SSR1-207ENST00000479485 TENM1Q9UKZ4 2725 aa1.96□□□□□ -2.1
SSR1-207ENST00000479485 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
SSR1-207ENST00000479485 COL7A1Q02388 2944 aa1.95□□□□□ -2.1
SSR1-207ENST00000479485 PLECQ15149 4684 aaKnown RBP1.94□□□□□ -2.1
SSR1-207ENST00000479485 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
SSR1-207ENST00000479485 MGAM2Q2M2H8 2515 aa1.92□□□□□ -2.1
SSR1-207ENST00000479485 STAB1Q9NY15 2570 aa1.9□□□□□ -2.11
SSR1-207ENST00000479485 DNAH5Q8TE73 4624 aa1.89□□□□□ -2.11
SSR1-207ENST00000479485 KMT2AQ03164 3969 aa1.89□□□□□ -2.11
SSR1-207ENST00000479485 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SSR1-207ENST00000479485 FBN3Q75N90 2809 aa1.88□□□□□ -2.11
SSR1-207ENST00000479485 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
SSR1-207ENST00000479485 LRP1BQ9NZR2 4599 aa1.88□□□□□ -2.11
SSR1-207ENST00000479485 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
SSR1-207ENST00000479485 VPS13BQ7Z7G8 4022 aa1.87□□□□□ -2.11
SSR1-207ENST00000479485 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
SSR1-207ENST00000479485 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
SSR1-207ENST00000479485 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
SSR1-207ENST00000479485 PKHD1P08F94 4074 aa1.84□□□□□ -2.12
SSR1-207ENST00000479485 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
SSR1-207ENST00000479485 SMR3BP02814 79 aaPredicted RBP1.83□□□□□ -2.12
SSR1-207ENST00000479485 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
SSR1-207ENST00000479485 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SSR1-207ENST00000479485 TNXBP22105 4242 aa1.81□□□□□ -2.12
SSR1-207ENST00000479485 STARD9Q9P2P6 4700 aa1.81□□□□□ -2.12
SSR1-207ENST00000479485 PKD1P98161 4303 aa1.81□□□□□ -2.12
SSR1-207ENST00000479485 HSPG2P98160 4391 aa1.8□□□□□ -2.12
SSR1-207ENST00000479485 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
SSR1-207ENST00000479485 FAT1Q14517 4588 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms