RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
VARS-224ENST00000479051 TRAV7A0A075B6U4 112 aa9.54□□□□□ -0.88
VARS-224ENST00000479051 LCE2BO14633 110 aa9.52□□□□□ -0.89
VARS-224ENST00000479051 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
VARS-224ENST00000479051 NDUFC1O43677 76 aa9.51□□□□□ -0.89
VARS-224ENST00000479051 USH2AO75445 5202 aa9.49□□□□□ -0.89
VARS-224ENST00000479051 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
VARS-224ENST00000479051 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
VARS-224ENST00000479051 H0YAA0 97 aa9.32□□□□□ -0.92
VARS-224ENST00000479051 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
VARS-224ENST00000479051 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
VARS-224ENST00000479051 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
VARS-224ENST00000479051 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
VARS-224ENST00000479051 ACYP2P14621 99 aa9.27□□□□□ -0.93
VARS-224ENST00000479051 C20orf197Q8N268 126 aa9.26□□□□□ -0.93
VARS-224ENST00000479051 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
VARS-224ENST00000479051 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
VARS-224ENST00000479051 KRTAP19-6Q3LI70 58 aa9.19□□□□□ -0.94
VARS-224ENST00000479051 Q5VV11 94 aa9.17□□□□□ -0.94
VARS-224ENST00000479051 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
VARS-224ENST00000479051 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
VARS-224ENST00000479051 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
VARS-224ENST00000479051 KRTAP19-8Q3LI54 63 aa9.13□□□□□ -0.95
VARS-224ENST00000479051 COX7CP15954 63 aa9.11□□□□□ -0.95
VARS-224ENST00000479051 FCGBPQ9Y6R7 5405 aaPredicted RBP9.09□□□□□ -0.95
VARS-224ENST00000479051 MT1BP07438 61 aa9.06□□□□□ -0.96
VARS-224ENST00000479051 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.97
VARS-224ENST00000479051 P0C880 135 aa9□□□□□ -0.97
VARS-224ENST00000479051 R4GN34 69 aa9□□□□□ -0.97
VARS-224ENST00000479051 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.98
VARS-224ENST00000479051 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
VARS-224ENST00000479051 A6NN06 94 aa8.93□□□□□ -0.98
VARS-224ENST00000479051 M0QZ58 72 aa8.92□□□□□ -0.98
VARS-224ENST00000479051 H7BZZ5 65 aa8.89□□□□□ -0.99
VARS-224ENST00000479051 COA5Q86WW8 74 aa8.87□□□□□ -0.99
VARS-224ENST00000479051 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
VARS-224ENST00000479051 KRTAP9-7A8MTY7 169 aa8.83□□□□□ -1
VARS-224ENST00000479051 KRTAP10-5P60370 271 aa8.83□□□□□ -1
VARS-224ENST00000479051 PLAC4Q8WY50 150 aa8.82□□□□□ -1
VARS-224ENST00000479051 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
VARS-224ENST00000479051 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
VARS-224ENST00000479051 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.02
VARS-224ENST00000479051 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
VARS-224ENST00000479051 SEC61GP60059 68 aa8.7□□□□□ -1.02
VARS-224ENST00000479051 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
VARS-224ENST00000479051 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
VARS-224ENST00000479051 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
VARS-224ENST00000479051 MT1XP80297 61 aa8.58□□□□□ -1.04
VARS-224ENST00000479051 KRTAP6-3Q3LI67 103 aa8.55□□□□□ -1.04
VARS-224ENST00000479051 KRTAP13-4Q3LI77 160 aa8.5□□□□□ -1.05
VARS-224ENST00000479051 TMEM258P61165 79 aa8.47□□□□□ -1.05
VARS-224ENST00000479051 A0A1B0GU33 70 aa8.46□□□□□ -1.06
VARS-224ENST00000479051 A0A1B0GU69 56 aa8.46□□□□□ -1.06
VARS-224ENST00000479051 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
VARS-224ENST00000479051 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
VARS-224ENST00000479051 A0A0D9SG42 100 aa8.34□□□□□ -1.07
VARS-224ENST00000479051 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
VARS-224ENST00000479051 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
VARS-224ENST00000479051 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
VARS-224ENST00000479051 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
VARS-224ENST00000479051 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
VARS-224ENST00000479051 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
VARS-224ENST00000479051 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
VARS-224ENST00000479051 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
VARS-224ENST00000479051 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
VARS-224ENST00000479051 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
VARS-224ENST00000479051 KMT2DO14686 5537 aa8.15□□□□□ -1.11
VARS-224ENST00000479051 PCP4P48539 62 aa8.13□□□□□ -1.11
VARS-224ENST00000479051 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
VARS-224ENST00000479051 A8MU10 97 aa8.1□□□□□ -1.11
VARS-224ENST00000479051 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
VARS-224ENST00000479051 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
VARS-224ENST00000479051 MUC12Q9UKN1 5478 aa8.09□□□□□ -1.11
VARS-224ENST00000479051 NEBP20929 6669 aa8.05□□□□□ -1.12
VARS-224ENST00000479051 UQCR11O14957 56 aa8.03□□□□□ -1.12
VARS-224ENST00000479051 V9GYY9 64 aa8.01□□□□□ -1.13
VARS-224ENST00000479051 MDN1Q9NU22 5596 aa7.95□□□□□ -1.14
VARS-224ENST00000479051 SPRR2EP22531 72 aa7.94□□□□□ -1.14
VARS-224ENST00000479051 SPRR2BP35325 72 aa7.94□□□□□ -1.14
VARS-224ENST00000479051 SPRR2AP35326 72 aa7.94□□□□□ -1.14
VARS-224ENST00000479051 Q1T7F1 81 aa7.89□□□□□ -1.15
VARS-224ENST00000479051 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
VARS-224ENST00000479051 PSPHP1O15172 72 aa7.85□□□□□ -1.15
VARS-224ENST00000479051 LCE1AQ5T7P2 110 aa7.83□□□□□ -1.16
VARS-224ENST00000479051 KRTAP20-1Q3LI63 56 aa7.8□□□□□ -1.16
VARS-224ENST00000479051 TNP1P09430 55 aa7.76□□□□□ -1.17
VARS-224ENST00000479051 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
VARS-224ENST00000479051 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
VARS-224ENST00000479051 K7ERS5 55 aa7.74□□□□□ -1.17
VARS-224ENST00000479051 KRTAP2-3P0C7H8 128 aa7.67□□□□□ -1.18
VARS-224ENST00000479051 SPRR2DP22532 72 aa7.67□□□□□ -1.18
VARS-224ENST00000479051 KRTAP2-4Q9BYR9 128 aa7.67□□□□□ -1.18
VARS-224ENST00000479051 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
VARS-224ENST00000479051 A6NED7 52 aa7.64□□□□□ -1.19
VARS-224ENST00000479051 MT1EP04732 61 aa7.59□□□□□ -1.19
VARS-224ENST00000479051 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
VARS-224ENST00000479051 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
VARS-224ENST00000479051 KRTAP19-3Q7Z4W3 81 aa7.5□□□□□ -1.21
VARS-224ENST00000479051 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
VARS-224ENST00000479051 LCE5AQ5TCM9 118 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms