RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PRO0461Q9UI25 63 aa5.7□□□□□ -1.5
VCL-205ENST00000478896 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
VCL-205ENST00000478896 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
VCL-205ENST00000478896 K7EP34 96 aa5.67□□□□□ -1.5
VCL-205ENST00000478896 NDUFC1O43677 76 aa5.66□□□□□ -1.5
VCL-205ENST00000478896 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
VCL-205ENST00000478896 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
VCL-205ENST00000478896 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
VCL-205ENST00000478896 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
VCL-205ENST00000478896 SPRR2EP22531 72 aa5.64□□□□□ -1.51
VCL-205ENST00000478896 SPRR2BP35325 72 aa5.64□□□□□ -1.51
VCL-205ENST00000478896 SPRR2AP35326 72 aa5.64□□□□□ -1.51
VCL-205ENST00000478896 A8MUN3 132 aa5.63□□□□□ -1.51
VCL-205ENST00000478896 H0YAA0 97 aa5.63□□□□□ -1.51
VCL-205ENST00000478896 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
VCL-205ENST00000478896 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
VCL-205ENST00000478896 GTF2H5Q6ZYL4 71 aa5.58□□□□□ -1.52
VCL-205ENST00000478896 H0Y9P7 68 aa5.57□□□□□ -1.52
VCL-205ENST00000478896 ACYP1P07311 99 aa5.57□□□□□ -1.52
VCL-205ENST00000478896 ETDBQ3ZM63 59 aa5.57□□□□□ -1.52
VCL-205ENST00000478896 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
VCL-205ENST00000478896 ATOX1O00244 68 aa5.56□□□□□ -1.52
VCL-205ENST00000478896 MT1XP80297 61 aa5.56□□□□□ -1.52
VCL-205ENST00000478896 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
VCL-205ENST00000478896 F8W1H4 67 aa5.55□□□□□ -1.52
VCL-205ENST00000478896 UQCRQO14949 82 aa5.55□□□□□ -1.52
VCL-205ENST00000478896 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
VCL-205ENST00000478896 R4GN34 69 aa5.51□□□□□ -1.53
VCL-205ENST00000478896 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
VCL-205ENST00000478896 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
VCL-205ENST00000478896 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
VCL-205ENST00000478896 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
VCL-205ENST00000478896 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
VCL-205ENST00000478896 PCP4L1A6NKN8 68 aa5.46□□□□□ -1.54
VCL-205ENST00000478896 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
VCL-205ENST00000478896 M0QZ58 72 aa5.45□□□□□ -1.54
VCL-205ENST00000478896 SPRR2DP22532 72 aa5.45□□□□□ -1.54
VCL-205ENST00000478896 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
VCL-205ENST00000478896 P0C880 135 aa5.42□□□□□ -1.54
VCL-205ENST00000478896 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
VCL-205ENST00000478896 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
VCL-205ENST00000478896 MP68P56378 58 aa5.4□□□□□ -1.54
VCL-205ENST00000478896 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
VCL-205ENST00000478896 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
VCL-205ENST00000478896 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
VCL-205ENST00000478896 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
VCL-205ENST00000478896 LINC00643Q86TS7 51 aa5.31□□□□□ -1.56
VCL-205ENST00000478896 OCR1Q9BZK8 76 aa5.31□□□□□ -1.56
VCL-205ENST00000478896 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
VCL-205ENST00000478896 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
VCL-205ENST00000478896 H3BPC8 53 aa5.26□□□□□ -1.57
VCL-205ENST00000478896 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
VCL-205ENST00000478896 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
VCL-205ENST00000478896 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
VCL-205ENST00000478896 A0A1B0GV90 55 aa5.17□□□□□ -1.58
VCL-205ENST00000478896 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.59
VCL-205ENST00000478896 ACYP2P14621 99 aa5.14□□□□□ -1.59
VCL-205ENST00000478896 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
VCL-205ENST00000478896 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
VCL-205ENST00000478896 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
VCL-205ENST00000478896 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
VCL-205ENST00000478896 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
VCL-205ENST00000478896 J3QR89 54 aa5.04□□□□□ -1.6
VCL-205ENST00000478896 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
VCL-205ENST00000478896 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
VCL-205ENST00000478896 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
VCL-205ENST00000478896 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
VCL-205ENST00000478896 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
VCL-205ENST00000478896 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
VCL-205ENST00000478896 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
VCL-205ENST00000478896 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
VCL-205ENST00000478896 MT1EP04732 61 aa4.95□□□□□ -1.62
VCL-205ENST00000478896 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
VCL-205ENST00000478896 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
VCL-205ENST00000478896 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
VCL-205ENST00000478896 SNURFQ9Y675 71 aa4.9□□□□□ -1.63
VCL-205ENST00000478896 K7ERU9 68 aa4.88□□□□□ -1.63
VCL-205ENST00000478896 A0A0D9SG42 100 aa4.84□□□□□ -1.63
VCL-205ENST00000478896 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
VCL-205ENST00000478896 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
VCL-205ENST00000478896 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
VCL-205ENST00000478896 MT1GP13640 62 aa4.81□□□□□ -1.64
VCL-205ENST00000478896 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
VCL-205ENST00000478896 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
VCL-205ENST00000478896 MT4P47944 62 aa4.79□□□□□ -1.64
VCL-205ENST00000478896 SEC61GP60059 68 aa4.79□□□□□ -1.64
VCL-205ENST00000478896 SERP1Q9Y6X1 66 aa4.78□□□□□ -1.64
VCL-205ENST00000478896 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
VCL-205ENST00000478896 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
VCL-205ENST00000478896 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
VCL-205ENST00000478896 COA5Q86WW8 74 aa4.75□□□□□ -1.65
VCL-205ENST00000478896 MT1MQ8N339 61 aa4.73□□□□□ -1.65
VCL-205ENST00000478896 A0A1B0GU33 70 aa4.69□□□□□ -1.66
VCL-205ENST00000478896 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
VCL-205ENST00000478896 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
VCL-205ENST00000478896 MT1LQ93083 61 aa4.68□□□□□ -1.66
VCL-205ENST00000478896 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
VCL-205ENST00000478896 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
VCL-205ENST00000478896 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
VCL-205ENST00000478896 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms