RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
VIM-204ENST00000478746 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
VIM-204ENST00000478746 IMUPQ9GZP8 106 aa7.67□□□□□ -1.18
VIM-204ENST00000478746 C5orf47Q569G3 176 aa7.65□□□□□ -1.18
VIM-204ENST00000478746 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
VIM-204ENST00000478746 Q5W150 140 aa7.63□□□□□ -1.19
VIM-204ENST00000478746 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
VIM-204ENST00000478746 UQCRQO14949 82 aa7.58□□□□□ -1.2
VIM-204ENST00000478746 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
VIM-204ENST00000478746 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
VIM-204ENST00000478746 SPRR2EP22531 72 aa7.55□□□□□ -1.2
VIM-204ENST00000478746 SPRR2BP35325 72 aa7.55□□□□□ -1.2
VIM-204ENST00000478746 SPRR2AP35326 72 aa7.55□□□□□ -1.2
VIM-204ENST00000478746 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
VIM-204ENST00000478746 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
VIM-204ENST00000478746 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
VIM-204ENST00000478746 KRTAP2-2Q9BYT5 123 aa7.52□□□□□ -1.21
VIM-204ENST00000478746 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
VIM-204ENST00000478746 H0Y9P7 68 aa7.51□□□□□ -1.21
VIM-204ENST00000478746 ATOX1O00244 68 aa7.5□□□□□ -1.21
VIM-204ENST00000478746 S4R3F8 94 aa7.5□□□□□ -1.21
VIM-204ENST00000478746 KLKP1Q107X0 134 aa7.49□□□□□ -1.21
VIM-204ENST00000478746 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
VIM-204ENST00000478746 MP68P56378 58 aa7.47□□□□□ -1.21
VIM-204ENST00000478746 SMIM20Q8N5G0 67 aa7.47□□□□□ -1.21
VIM-204ENST00000478746 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
VIM-204ENST00000478746 LCA10Q71F78 164 aa7.43□□□□□ -1.22
VIM-204ENST00000478746 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
VIM-204ENST00000478746 LINC00208Q96KT6 92 aa7.43□□□□□ -1.22
VIM-204ENST00000478746 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
VIM-204ENST00000478746 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
VIM-204ENST00000478746 H3BPC8 53 aa7.39□□□□□ -1.23
VIM-204ENST00000478746 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
VIM-204ENST00000478746 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
VIM-204ENST00000478746 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
VIM-204ENST00000478746 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
VIM-204ENST00000478746 SPRR2DP22532 72 aa7.31□□□□□ -1.24
VIM-204ENST00000478746 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
VIM-204ENST00000478746 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
VIM-204ENST00000478746 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
VIM-204ENST00000478746 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
VIM-204ENST00000478746 COX7CP15954 63 aa7.23□□□□□ -1.25
VIM-204ENST00000478746 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
VIM-204ENST00000478746 MT1XP80297 61 aa7.19□□□□□ -1.26
VIM-204ENST00000478746 A8MUN3 132 aa7.18□□□□□ -1.26
VIM-204ENST00000478746 GPR98Q8WXG9 6306 aa7.17□□□□□ -1.26
VIM-204ENST00000478746 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
VIM-204ENST00000478746 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
VIM-204ENST00000478746 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
VIM-204ENST00000478746 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
VIM-204ENST00000478746 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
VIM-204ENST00000478746 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
VIM-204ENST00000478746 NDUFC1O43677 76 aa7.07□□□□□ -1.28
VIM-204ENST00000478746 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
VIM-204ENST00000478746 H0YAA0 97 aa7.05□□□□□ -1.28
VIM-204ENST00000478746 ACYP2P14621 99 aa7.04□□□□□ -1.28
VIM-204ENST00000478746 CCDC179H3BU77 68 aa7.03□□□□□ -1.28
VIM-204ENST00000478746 H7BZZ5 65 aa7.01□□□□□ -1.29
VIM-204ENST00000478746 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
VIM-204ENST00000478746 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
VIM-204ENST00000478746 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
VIM-204ENST00000478746 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
VIM-204ENST00000478746 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
VIM-204ENST00000478746 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
VIM-204ENST00000478746 COA5Q86WW8 74 aa6.86□□□□□ -1.31
VIM-204ENST00000478746 R4GN34 69 aa6.86□□□□□ -1.31
VIM-204ENST00000478746 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
VIM-204ENST00000478746 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
VIM-204ENST00000478746 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
VIM-204ENST00000478746 TMEM258P61165 79 aa6.81□□□□□ -1.32
VIM-204ENST00000478746 M0QZ58 72 aa6.77□□□□□ -1.33
VIM-204ENST00000478746 P0C880 135 aa6.76□□□□□ -1.33
VIM-204ENST00000478746 PCP4P48539 62 aa6.76□□□□□ -1.33
VIM-204ENST00000478746 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
VIM-204ENST00000478746 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
VIM-204ENST00000478746 SEC61GP60059 68 aa6.61□□□□□ -1.35
VIM-204ENST00000478746 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
VIM-204ENST00000478746 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
VIM-204ENST00000478746 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
VIM-204ENST00000478746 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
VIM-204ENST00000478746 A0A1B0GU69 56 aa6.51□□□□□ -1.37
VIM-204ENST00000478746 KRTAP19-3Q7Z4W3 81 aa6.48□□□□□ -1.37
VIM-204ENST00000478746 AHNAK2Q8IVF2 5795 aa6.47□□□□□ -1.37
VIM-204ENST00000478746 PRR15LQ9BU68 103 aa6.46□□□□□ -1.38
VIM-204ENST00000478746 MT4P47944 62 aa6.45□□□□□ -1.38
VIM-204ENST00000478746 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
VIM-204ENST00000478746 A0A1B0GU33 70 aa6.43□□□□□ -1.38
VIM-204ENST00000478746 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
VIM-204ENST00000478746 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
VIM-204ENST00000478746 MT1EP04732 61 aa6.41□□□□□ -1.38
VIM-204ENST00000478746 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
VIM-204ENST00000478746 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
VIM-204ENST00000478746 KRTAP5-10Q6L8G5 202 aa6.38□□□□□ -1.39
VIM-204ENST00000478746 SMIM26A0A096LP01 95 aa6.37□□□□□ -1.39
VIM-204ENST00000478746 V9GYY9 64 aa6.37□□□□□ -1.39
VIM-204ENST00000478746 SPATA8Q6RVD6 105 aa6.33□□□□□ -1.4
VIM-204ENST00000478746 Q1T7F1 81 aa6.32□□□□□ -1.4
VIM-204ENST00000478746 A0A0D9SG42 100 aa6.28□□□□□ -1.4
VIM-204ENST00000478746 MT1GP13640 62 aa6.28□□□□□ -1.4
VIM-204ENST00000478746 PSPHP1O15172 72 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms