RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SORL1Q92673 2214 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 FRAS1Q86XX4 4008 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 CSMD3Q7Z407 3707 aa1.71□□□□□ -2.14
FNDC3B-209ENST00000478016 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
FNDC3B-209ENST00000478016 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
FNDC3B-209ENST00000478016 DNAH10Q8IVF4 4471 aa1.71□□□□□ -2.14
FNDC3B-209ENST00000478016 K7EIM0 57 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 RYR1P21817 5038 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 SPINK13Q1W4C9 94 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 SPINK9Q5DT21 86 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 TENM2Q9NT68 2774 aa1.7□□□□□ -2.14
FNDC3B-209ENST00000478016 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 PRR9Q5T870 116 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 MRPL34Q9BQ48 92 aaKnown RBP1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 CRIPTQ9P021 101 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 C6orf48Q9UBA6 75 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 DYNC1H1Q14204 4646 aaKnown RBP1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 FAT2Q9NYQ8 4349 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 DNAH2Q9P225 4427 aa1.69□□□□□ -2.14
FNDC3B-209ENST00000478016 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
FNDC3B-209ENST00000478016 M0QY20 66 aa1.68□□□□□ -2.14
FNDC3B-209ENST00000478016 APELAP0DMC3 54 aa1.68□□□□□ -2.14
FNDC3B-209ENST00000478016 Q6ZSA8 131 aa1.68□□□□□ -2.14
FNDC3B-209ENST00000478016 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
FNDC3B-209ENST00000478016 RHPN1-AS1Q9BWJ2 59 aa1.67□□□□□ -2.14
FNDC3B-209ENST00000478016 KMT2AQ03164 3969 aa1.66□□□□□ -2.14
FNDC3B-209ENST00000478016 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
FNDC3B-209ENST00000478016 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
FNDC3B-209ENST00000478016 UNQ6190/PRO20217Q6UXQ8 127 aa1.66□□□□□ -2.14
FNDC3B-209ENST00000478016 DEFB131AP59861 70 aa1.65□□□□□ -2.15
FNDC3B-209ENST00000478016 COX6A2Q02221 97 aa1.65□□□□□ -2.15
FNDC3B-209ENST00000478016 DNAH17Q9UFH2 4485 aa1.65□□□□□ -2.15
FNDC3B-209ENST00000478016 HSPG2P98160 4391 aa1.64□□□□□ -2.15
FNDC3B-209ENST00000478016 DEFB135Q30KP9 77 aa1.64□□□□□ -2.15
FNDC3B-209ENST00000478016 WFDC13Q8IUB5 93 aa1.64□□□□□ -2.15
FNDC3B-209ENST00000478016 UBE2DNLQ8IWF7 75 aa1.64□□□□□ -2.15
FNDC3B-209ENST00000478016 APOBP04114 4563 aaKnown RBP1.64□□□□□ -2.15
FNDC3B-209ENST00000478016 PKD1P98161 4303 aa1.63□□□□□ -2.15
FNDC3B-209ENST00000478016 MMP24-AS1A0A0U1RRL7 71 aa1.63□□□□□ -2.15
FNDC3B-209ENST00000478016 A8MTW9 85 aa1.63□□□□□ -2.15
FNDC3B-209ENST00000478016 KRTAP4-3Q9BYR4 195 aa1.63□□□□□ -2.15
FNDC3B-209ENST00000478016 LRP1BQ9NZR2 4599 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 DEFB4AO15263 64 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 H1FX-AS1Q4G0G2 97 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 WFDC10BQ8IUB3 73 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 HERC1Q15751 4861 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 DNAH5Q8TE73 4624 aa1.62□□□□□ -2.15
FNDC3B-209ENST00000478016 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
FNDC3B-209ENST00000478016 KRTAP13-4Q3LI77 160 aa1.6□□□□□ -2.15
FNDC3B-209ENST00000478016 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
FNDC3B-209ENST00000478016 UBR4Q5T4S7 5183 aa1.6□□□□□ -2.15
FNDC3B-209ENST00000478016 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.16
FNDC3B-209ENST00000478016 FAT1Q14517 4588 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 H3BNG1 76 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 SPART-AS1P0CW21 52 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 DEFB130BP0DP73 79 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 DEFB130AP0DP74 79 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 HTN3P15516 51 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 DEFB1P60022 68 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
FNDC3B-209ENST00000478016 HTN1P15515 57 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 LELP1Q5T871 98 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 CLPSL2Q6UWE3 100 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 PRO0255Q9UI72 69 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
FNDC3B-209ENST00000478016 NOP10Q9NPE3 64 aaKnown RBP1.56□□□□□ -2.16
FNDC3B-209ENST00000478016 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
FNDC3B-209ENST00000478016 KRTAP10-1P60331 282 aa1.54□□□□□ -2.16
FNDC3B-209ENST00000478016 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
FNDC3B-209ENST00000478016 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
FNDC3B-209ENST00000478016 Q5VSD8 79 aa1.53□□□□□ -2.16
FNDC3B-209ENST00000478016 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
FNDC3B-209ENST00000478016 A0A096LPF7 62 aa1.52□□□□□ -2.17
FNDC3B-209ENST00000478016 SPRR1AP35321 89 aa1.52□□□□□ -2.17
FNDC3B-209ENST00000478016 KRTAP10-10P60014 251 aa1.52□□□□□ -2.17
FNDC3B-209ENST00000478016 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
FNDC3B-209ENST00000478016 RNF213Q63HN8 5207 aa1.52□□□□□ -2.17
FNDC3B-209ENST00000478016 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
FNDC3B-209ENST00000478016 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
FNDC3B-209ENST00000478016 LINC01556Q5JQF7 62 aa1.51□□□□□ -2.17
FNDC3B-209ENST00000478016 TOMM7Q9P0U1 55 aa1.51□□□□□ -2.17
FNDC3B-209ENST00000478016 LRP1Q07954 4544 aaKnown RBP1.5□□□□□ -2.17
FNDC3B-209ENST00000478016 SMR3BP02814 79 aaPredicted RBP1.49□□□□□ -2.17
FNDC3B-209ENST00000478016 SPRR1BP22528 89 aa1.48□□□□□ -2.17
FNDC3B-209ENST00000478016 DEFB104AQ8WTQ1 72 aa1.48□□□□□ -2.17
FNDC3B-209ENST00000478016 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
FNDC3B-209ENST00000478016 TNXBP22105 4242 aa1.47□□□□□ -2.17
FNDC3B-209ENST00000478016 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
FNDC3B-209ENST00000478016 S4R3F8 94 aa1.46□□□□□ -2.18
FNDC3B-209ENST00000478016 LRP2P98164 4655 aa1.45□□□□□ -2.18
FNDC3B-209ENST00000478016 DEFB105AQ8NG35 78 aa1.45□□□□□ -2.18
FNDC3B-209ENST00000478016 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
FNDC3B-209ENST00000478016 LPAP08519 4548 aa1.41□□□□□ -2.18
FNDC3B-209ENST00000478016 MUC2Q02817 5179 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms