RNA–Protein interactions for RNA: ENST00000477193.1

SRSF4-203, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 206 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-203ENST00000477193 SONP18583 2426 aaKnown RBP1.61□□□□□ -2.15
SRSF4-203ENST00000477193 DNAH7Q8WXX0 4024 aa1.61□□□□□ -2.15
SRSF4-203ENST00000477193 ITPR3Q14573 2671 aa1.6□□□□□ -2.15
SRSF4-203ENST00000477193 SMR3AQ99954 134 aa1.6□□□□□ -2.15
SRSF4-203ENST00000477193 PKD1L2Q7Z442 2459 aa1.6□□□□□ -2.15
SRSF4-203ENST00000477193 CFAP46Q8IYW2 2715 aa1.6□□□□□ -2.15
SRSF4-203ENST00000477193 SACSQ9NZJ4 4579 aa1.59□□□□□ -2.15
SRSF4-203ENST00000477193 BAHCC1Q9P281 2608 aa1.59□□□□□ -2.15
SRSF4-203ENST00000477193 DNAH6Q9C0G6 4158 aa1.59□□□□□ -2.15
SRSF4-203ENST00000477193 INE1O15225 51 aa1.59□□□□□ -2.15
SRSF4-203ENST00000477193 CCDC168Q8NDH2 2452 aa1.59□□□□□ -2.16
SRSF4-203ENST00000477193 ZFHX2Q9C0A1 2572 aaPredicted RBP1.58□□□□□ -2.16
SRSF4-203ENST00000477193 NIPBLQ6KC79 2804 aaeCLIP1.58□□□□□ -2.166e-7■□□□□ 10.3
SRSF4-203ENST00000477193 DNAH2Q9P225 4427 aa1.58□□□□□ -2.16
SRSF4-203ENST00000477193 SRRM2Q9UQ35 2752 aaKnown RBP1.58□□□□□ -2.16
SRSF4-203ENST00000477193 CMYA5Q8N3K9 4069 aa1.58□□□□□ -2.16
SRSF4-203ENST00000477193 ACACBO00763 2458 aa1.58□□□□□ -2.16
SRSF4-203ENST00000477193 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
SRSF4-203ENST00000477193 POLQO75417 2590 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 HECTD1Q9ULT8 2610 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 DNAH11Q96DT5 4516 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 CENPEQ02224 2701 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 UBR5O95071 2799 aaPredicted RBP1.57□□□□□ -2.16
SRSF4-203ENST00000477193 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 NOTCH2Q04721 2471 aa1.57□□□□□ -2.16
SRSF4-203ENST00000477193 SETD2Q9BYW2 2564 aaPredicted RBP1.56□□□□□ -2.16
SRSF4-203ENST00000477193 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
SRSF4-203ENST00000477193 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
SRSF4-203ENST00000477193 ABCA12Q86UK0 2595 aa1.56□□□□□ -2.16
SRSF4-203ENST00000477193 FLNAP21333 2647 aaKnown RBP1.56□□□□□ -2.16
SRSF4-203ENST00000477193 TENM3Q9P273 2699 aa1.56□□□□□ -2.16
SRSF4-203ENST00000477193 ACANP16112 2415 aa1.55□□□□□ -2.16
SRSF4-203ENST00000477193 MEGF8Q7Z7M0 2845 aa1.54□□□□□ -2.16
SRSF4-203ENST00000477193 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
SRSF4-203ENST00000477193 HELZ2Q9BYK8 2649 aaKnown RBP1.54□□□□□ -2.16
SRSF4-203ENST00000477193 VWFP04275 2813 aa1.54□□□□□ -2.16
SRSF4-203ENST00000477193 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
SRSF4-203ENST00000477193 PDZD2O15018 2839 aa1.53□□□□□ -2.16
SRSF4-203ENST00000477193 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
SRSF4-203ENST00000477193 PLECQ15149 4684 aaKnown RBP1.53□□□□□ -2.16
SRSF4-203ENST00000477193 TGP01266 2768 aa1.53□□□□□ -2.17
SRSF4-203ENST00000477193 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
SRSF4-203ENST00000477193 PKD1L1Q8TDX9 2849 aa1.52□□□□□ -2.17
SRSF4-203ENST00000477193 FAM208BQ5VWN6 2430 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 FLNCQ14315 2725 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 KMT2AQ03164 3969 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 J3QKU1 62 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 Q5VSD8 79 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 FASNP49327 2511 aaKnown RBP1.51□□□□□ -2.17
SRSF4-203ENST00000477193 STAB2Q8WWQ8 2551 aa1.51□□□□□ -2.17
SRSF4-203ENST00000477193 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
SRSF4-203ENST00000477193 MAST4O15021 2626 aa1.5□□□□□ -2.17
SRSF4-203ENST00000477193 CACNA1AO00555 2505 aa1.49□□□□□ -2.17
SRSF4-203ENST00000477193 IGSF10Q6WRI0 2623 aa1.49□□□□□ -2.17
SRSF4-203ENST00000477193 MYO18BQ8IUG5 2567 aa1.49□□□□□ -2.17
SRSF4-203ENST00000477193 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
SRSF4-203ENST00000477193 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
SRSF4-203ENST00000477193 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
SRSF4-203ENST00000477193 COL6A5A8TX70 2615 aa1.48□□□□□ -2.17
SRSF4-203ENST00000477193 TEP1Q99973 2627 aaKnown RBP1.48□□□□□ -2.17
SRSF4-203ENST00000477193 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
SRSF4-203ENST00000477193 PKHD1P08F94 4074 aa1.47□□□□□ -2.17
SRSF4-203ENST00000477193 NSD1Q96L73 2696 aaPredicted RBP1.47□□□□□ -2.17
SRSF4-203ENST00000477193 FAT2Q9NYQ8 4349 aa1.47□□□□□ -2.17
SRSF4-203ENST00000477193 ITPR2Q14571 2701 aa1.46□□□□□ -2.17
SRSF4-203ENST00000477193 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.17
SRSF4-203ENST00000477193 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
SRSF4-203ENST00000477193 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 NBEAL1Q6ZS30 2694 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 COL7A1Q02388 2944 aa1.46□□□□□ -2.18
SRSF4-203ENST00000477193 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
SRSF4-203ENST00000477193 TNXBP22105 4242 aa1.45□□□□□ -2.18
SRSF4-203ENST00000477193 TNP1P09430 55 aa1.45□□□□□ -2.18
SRSF4-203ENST00000477193 FLNBO75369 2602 aaKnown RBP1.45□□□□□ -2.18
SRSF4-203ENST00000477193 ATRQ13535 2644 aa1.45□□□□□ -2.18
SRSF4-203ENST00000477193 NOTCH1P46531 2555 aa1.45□□□□□ -2.18
SRSF4-203ENST00000477193 HSPG2P98160 4391 aa1.44□□□□□ -2.18
SRSF4-203ENST00000477193 DYNC1H1Q14204 4646 aaKnown RBP1.43□□□□□ -2.18
SRSF4-203ENST00000477193 FAT3Q8TDW7 4589 aa1.42□□□□□ -2.18
SRSF4-203ENST00000477193 KRTAP4-3Q9BYR4 195 aa1.42□□□□□ -2.18
SRSF4-203ENST00000477193 USP24Q9UPU5 2620 aa1.42□□□□□ -2.18
SRSF4-203ENST00000477193 PKD1P98161 4303 aa1.42□□□□□ -2.18
SRSF4-203ENST00000477193 DMBT1Q9UGM3 2413 aaPredicted RBP1.41□□□□□ -2.18
SRSF4-203ENST00000477193 FAT1Q14517 4588 aa1.39□□□□□ -2.19
SRSF4-203ENST00000477193 MGAM2Q2M2H8 2515 aa1.39□□□□□ -2.19
SRSF4-203ENST00000477193 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
SRSF4-203ENST00000477193 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
SRSF4-203ENST00000477193 STAB1Q9NY15 2570 aa1.36□□□□□ -2.19
SRSF4-203ENST00000477193 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
SRSF4-203ENST00000477193 DNHD1Q96M86 4753 aa1.33□□□□□ -2.2
SRSF4-203ENST00000477193 SMR3BP02814 79 aaPredicted RBP1.32□□□□□ -2.2
SRSF4-203ENST00000477193 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
SRSF4-203ENST00000477193 FLGP20930 4061 aaPredicted RBP1.3□□□□□ -2.2
SRSF4-203ENST00000477193 HERC1Q15751 4861 aa1.29□□□□□ -2.2
SRSF4-203ENST00000477193 MT1HL1P0DM35 61 aa1.29□□□□□ -2.2
SRSF4-203ENST00000477193 HYDINQ4G0P3 5121 aa1.29□□□□□ -2.2
SRSF4-203ENST00000477193 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms