RNA–Protein interactions for RNA: ENST00000477086.5

MUC4-216, Transcript of mucin 4, cell surface associated, humanhuman

TSL 5

Gene MUC4, Length 16,353 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-216ENST00000477086 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
MUC4-216ENST00000477086 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
MUC4-216ENST00000477086 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.97
MUC4-216ENST00000477086 CUBNO60494 3623 aa2.76□□□□□ -1.97
MUC4-216ENST00000477086 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
MUC4-216ENST00000477086 MUC3AQ02505 3323 aa2.71□□□□□ -1.98
MUC4-216ENST00000477086 SACSQ9NZJ4 4579 aa2.67□□□□□ -1.98
MUC4-216ENST00000477086 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
MUC4-216ENST00000477086 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
MUC4-216ENST00000477086 DNAH17Q9UFH2 4485 aa2.66□□□□□ -1.98
MUC4-216ENST00000477086 KRTAP10-6P60371 365 aaPredicted RBP2.65□□□□□ -1.99
MUC4-216ENST00000477086 KRTAP3-1Q9BYR8 98 aa2.64□□□□□ -1.99
MUC4-216ENST00000477086 DYNC2H1Q8NCM8 4307 aaKnown RBP2.64□□□□□ -1.99
MUC4-216ENST00000477086 CSMD2Q7Z408 3487 aa2.62□□□□□ -1.99
MUC4-216ENST00000477086 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
MUC4-216ENST00000477086 CSMD3Q7Z407 3707 aa2.6□□□□□ -1.99
MUC4-216ENST00000477086 DYNC1H1Q14204 4646 aaKnown RBP2.59□□□□□ -2
MUC4-216ENST00000477086 KRTAP3-2Q9BYR7 98 aa2.57□□□□□ -2
MUC4-216ENST00000477086 DNAH9Q9NYC9 4486 aa2.56□□□□□ -2
MUC4-216ENST00000477086 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
MUC4-216ENST00000477086 HSPG2P98160 4391 aa2.53□□□□□ -2.01
MUC4-216ENST00000477086 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
MUC4-216ENST00000477086 DNAH5Q8TE73 4624 aa2.52□□□□□ -2.01
MUC4-216ENST00000477086 KRTAP3-3Q9BYR6 98 aa2.5□□□□□ -2.01
MUC4-216ENST00000477086 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
MUC4-216ENST00000477086 KRTAP10-12P60413 245 aa2.48□□□□□ -2.01
MUC4-216ENST00000477086 LRP1Q07954 4544 aaKnown RBP2.48□□□□□ -2.01
MUC4-216ENST00000477086 TNXBP22105 4242 aa2.47□□□□□ -2.01
MUC4-216ENST00000477086 PKD1P98161 4303 aa2.47□□□□□ -2.01
MUC4-216ENST00000477086 DNHD1Q96M86 4753 aa2.45□□□□□ -2.02
MUC4-216ENST00000477086 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
MUC4-216ENST00000477086 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
MUC4-216ENST00000477086 APOBP04114 4563 aaKnown RBP2.44□□□□□ -2.02
MUC4-216ENST00000477086 MT3P25713 68 aa2.43□□□□□ -2.02
MUC4-216ENST00000477086 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.02
MUC4-216ENST00000477086 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
MUC4-216ENST00000477086 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
MUC4-216ENST00000477086 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
MUC4-216ENST00000477086 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
MUC4-216ENST00000477086 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
MUC4-216ENST00000477086 FAT1Q14517 4588 aa2.29□□□□□ -2.04
MUC4-216ENST00000477086 KRTAP10-4P60372 401 aaPredicted RBP2.27□□□□□ -2.05
MUC4-216ENST00000477086 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
MUC4-216ENST00000477086 RYR1P21817 5038 aa2.2□□□□□ -2.06
MUC4-216ENST00000477086 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
MUC4-216ENST00000477086 MT1HL1P0DM35 61 aa2.18□□□□□ -2.06
MUC4-216ENST00000477086 RYR2Q92736 4967 aa2.17□□□□□ -2.06
MUC4-216ENST00000477086 LORP23490 312 aaPredicted RBP2.16□□□□□ -2.06
MUC4-216ENST00000477086 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
MUC4-216ENST00000477086 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.06
MUC4-216ENST00000477086 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
MUC4-216ENST00000477086 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
MUC4-216ENST00000477086 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
MUC4-216ENST00000477086 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
MUC4-216ENST00000477086 KRTAP4-5Q9BYR2 181 aa2.11□□□□□ -2.07
MUC4-216ENST00000477086 RYR3Q15413 4870 aa2.1□□□□□ -2.07
MUC4-216ENST00000477086 LRP2P98164 4655 aa2.1□□□□□ -2.07
MUC4-216ENST00000477086 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
MUC4-216ENST00000477086 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
MUC4-216ENST00000477086 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
MUC4-216ENST00000477086 HYDINQ4G0P3 5121 aa2.03□□□□□ -2.08
MUC4-216ENST00000477086 HMCN2Q8NDA2 5059 aa2.03□□□□□ -2.08
MUC4-216ENST00000477086 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
MUC4-216ENST00000477086 ABCA13Q86UQ4 5058 aa1.99□□□□□ -2.09
MUC4-216ENST00000477086 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
MUC4-216ENST00000477086 LPAP08519 4548 aa1.96□□□□□ -2.1
MUC4-216ENST00000477086 HERC1Q15751 4861 aa1.95□□□□□ -2.1
MUC4-216ENST00000477086 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
MUC4-216ENST00000477086 HERC2O95714 4834 aa1.92□□□□□ -2.1
MUC4-216ENST00000477086 KIAA1109Q2LD37 5005 aa1.92□□□□□ -2.1
MUC4-216ENST00000477086 UBR4Q5T4S7 5183 aa1.92□□□□□ -2.1
MUC4-216ENST00000477086 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
MUC4-216ENST00000477086 MT2AP02795 61 aa1.91□□□□□ -2.1
MUC4-216ENST00000477086 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
MUC4-216ENST00000477086 RNF213Q63HN8 5207 aa1.91□□□□□ -2.1
MUC4-216ENST00000477086 MT1HP80294 61 aa1.91□□□□□ -2.1
MUC4-216ENST00000477086 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
MUC4-216ENST00000477086 KMT2CQ8NEZ4 4911 aaKnown RBP1.9□□□□□ -2.11
MUC4-216ENST00000477086 LCE3BQ5TA77 95 aa1.9□□□□□ -2.11
MUC4-216ENST00000477086 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.11
MUC4-216ENST00000477086 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
MUC4-216ENST00000477086 MT1FP04733 61 aa1.87□□□□□ -2.11
MUC4-216ENST00000477086 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
MUC4-216ENST00000477086 EPPK1P58107 5090 aaKnown RBP1.86□□□□□ -2.11
MUC4-216ENST00000477086 MT1XP80297 61 aa1.86□□□□□ -2.11
MUC4-216ENST00000477086 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.12
MUC4-216ENST00000477086 KMT2DO14686 5537 aa1.83□□□□□ -2.12
MUC4-216ENST00000477086 KRTAP17-1Q9BYP8 105 aa1.82□□□□□ -2.12
MUC4-216ENST00000477086 MT1GP13640 62 aa1.82□□□□□ -2.12
MUC4-216ENST00000477086 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
MUC4-216ENST00000477086 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
MUC4-216ENST00000477086 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
MUC4-216ENST00000477086 MT1LQ93083 61 aa1.8□□□□□ -2.12
MUC4-216ENST00000477086 PRM1P04553 51 aa1.79□□□□□ -2.12
MUC4-216ENST00000477086 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
MUC4-216ENST00000477086 MT1BP07438 61 aa1.75□□□□□ -2.13
MUC4-216ENST00000477086 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
MUC4-216ENST00000477086 MT1EP04732 61 aa1.74□□□□□ -2.13
MUC4-216ENST00000477086 LCE2BO14633 110 aa1.73□□□□□ -2.13
MUC4-216ENST00000477086 SPRR2EP22531 72 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms