RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 A0A1B0GU33 70 aa10.93□□□□□ -0.66
LIMS2-214ENST00000476932 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
LIMS2-214ENST00000476932 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
LIMS2-214ENST00000476932 DMBT1Q9UGM3 2413 aaPredicted RBP10.91□□□□□ -0.66
LIMS2-214ENST00000476932 XP32Q5T750 250 aa10.89□□□□□ -0.67
LIMS2-214ENST00000476932 MYCBP2O75592 4640 aa10.89□□□□□ -0.67
LIMS2-214ENST00000476932 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
LIMS2-214ENST00000476932 MT1HL1P0DM35 61 aa10.79□□□□□ -0.68
LIMS2-214ENST00000476932 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
LIMS2-214ENST00000476932 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
LIMS2-214ENST00000476932 CSAG1Q6PB30 78 aa10.69□□□□□ -0.7
LIMS2-214ENST00000476932 S4R3F8 94 aa10.65□□□□□ -0.7
LIMS2-214ENST00000476932 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
LIMS2-214ENST00000476932 EPPK1P58107 5090 aaKnown RBP10.63□□□□□ -0.71
LIMS2-214ENST00000476932 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
LIMS2-214ENST00000476932 KRTAP13-4Q3LI77 160 aa10.59□□□□□ -0.71
LIMS2-214ENST00000476932 LPAP08519 4548 aa10.57□□□□□ -0.72
LIMS2-214ENST00000476932 LRP2P98164 4655 aa10.54□□□□□ -0.72
LIMS2-214ENST00000476932 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
LIMS2-214ENST00000476932 K7ERS5 55 aa10.48□□□□□ -0.73
LIMS2-214ENST00000476932 P0C880 135 aa10.48□□□□□ -0.73
LIMS2-214ENST00000476932 KRTAP25-1Q3LHN0 102 aa10.43□□□□□ -0.74
LIMS2-214ENST00000476932 A0A0D9SG42 100 aa10.41□□□□□ -0.74
LIMS2-214ENST00000476932 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
LIMS2-214ENST00000476932 ABCA13Q86UQ4 5058 aa10.4□□□□□ -0.75
LIMS2-214ENST00000476932 ROMO1P60602 79 aa10.31□□□□□ -0.76
LIMS2-214ENST00000476932 CRIPTQ9P021 101 aa10.28□□□□□ -0.76
LIMS2-214ENST00000476932 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
LIMS2-214ENST00000476932 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
LIMS2-214ENST00000476932 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
LIMS2-214ENST00000476932 M0QZ58 72 aa10.1□□□□□ -0.79
LIMS2-214ENST00000476932 J3QL48 77 aa10.06□□□□□ -0.8
LIMS2-214ENST00000476932 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
LIMS2-214ENST00000476932 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
LIMS2-214ENST00000476932 KRTAP4-1Q9BYQ7 146 aa10.04□□□□□ -0.8
LIMS2-214ENST00000476932 HERC2O95714 4834 aa10.01□□□□□ -0.81
LIMS2-214ENST00000476932 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
LIMS2-214ENST00000476932 BIRC6Q9NR09 4857 aa9.91□□□□□ -0.82
LIMS2-214ENST00000476932 KRTAP19-2Q3LHN2 52 aa9.9□□□□□ -0.83
LIMS2-214ENST00000476932 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
LIMS2-214ENST00000476932 R4GN34 69 aa9.85□□□□□ -0.83
LIMS2-214ENST00000476932 H3BS24 57 aa9.82□□□□□ -0.84
LIMS2-214ENST00000476932 FLGP20930 4061 aaPredicted RBP9.63□□□□□ -0.87
LIMS2-214ENST00000476932 MUC2Q02817 5179 aa9.63□□□□□ -0.87
LIMS2-214ENST00000476932 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
LIMS2-214ENST00000476932 HERC1Q15751 4861 aa9.54□□□□□ -0.88
LIMS2-214ENST00000476932 KRTAP15-1Q3LI76 137 aa9.52□□□□□ -0.89
LIMS2-214ENST00000476932 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
LIMS2-214ENST00000476932 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
LIMS2-214ENST00000476932 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
LIMS2-214ENST00000476932 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
LIMS2-214ENST00000476932 NDUFAF8A1L188 74 aa9.18□□□□□ -0.94
LIMS2-214ENST00000476932 PP632Q6XCG6 107 aa9.15□□□□□ -0.95
LIMS2-214ENST00000476932 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
LIMS2-214ENST00000476932 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
LIMS2-214ENST00000476932 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
LIMS2-214ENST00000476932 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
LIMS2-214ENST00000476932 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
LIMS2-214ENST00000476932 MT1HP80294 61 aa9.01□□□□□ -0.97
LIMS2-214ENST00000476932 TNP1P09430 55 aa8.98□□□□□ -0.97
LIMS2-214ENST00000476932 M0R2T5 61 aa8.92□□□□□ -0.98
LIMS2-214ENST00000476932 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
LIMS2-214ENST00000476932 MT1FP04733 61 aa8.87□□□□□ -0.99
LIMS2-214ENST00000476932 MT2AP02795 61 aa8.87□□□□□ -0.99
LIMS2-214ENST00000476932 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
LIMS2-214ENST00000476932 KRTAP10-10P60014 251 aa8.77□□□□□ -1.01
LIMS2-214ENST00000476932 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
LIMS2-214ENST00000476932 SPRR5A0A1B0GTR4 108 aa8.59□□□□□ -1.03
LIMS2-214ENST00000476932 LUZP6Q538Z0 58 aa8.59□□□□□ -1.03
LIMS2-214ENST00000476932 LCE3AQ5TA76 89 aa8.59□□□□□ -1.03
LIMS2-214ENST00000476932 MT1BP07438 61 aa8.58□□□□□ -1.04
LIMS2-214ENST00000476932 KRTAP10-5P60370 271 aa8.5□□□□□ -1.05
LIMS2-214ENST00000476932 MT1XP80297 61 aa8.5□□□□□ -1.05
LIMS2-214ENST00000476932 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
LIMS2-214ENST00000476932 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
LIMS2-214ENST00000476932 A0A0A0MQY5 61 aa8.34□□□□□ -1.07
LIMS2-214ENST00000476932 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
LIMS2-214ENST00000476932 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
LIMS2-214ENST00000476932 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
LIMS2-214ENST00000476932 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
LIMS2-214ENST00000476932 LCE2BO14633 110 aa8.12□□□□□ -1.11
LIMS2-214ENST00000476932 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
LIMS2-214ENST00000476932 USH2AO75445 5202 aa7.94□□□□□ -1.14
LIMS2-214ENST00000476932 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
LIMS2-214ENST00000476932 KMT2DO14686 5537 aa7.79□□□□□ -1.16
LIMS2-214ENST00000476932 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
LIMS2-214ENST00000476932 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
LIMS2-214ENST00000476932 LCE3CQ5T5A8 94 aa7.69□□□□□ -1.18
LIMS2-214ENST00000476932 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
LIMS2-214ENST00000476932 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
LIMS2-214ENST00000476932 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
LIMS2-214ENST00000476932 INE1O15225 51 aa7.39□□□□□ -1.23
LIMS2-214ENST00000476932 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
LIMS2-214ENST00000476932 MT1EP04732 61 aa7.35□□□□□ -1.23
LIMS2-214ENST00000476932 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
LIMS2-214ENST00000476932 MT1LQ93083 61 aa7.34□□□□□ -1.24
LIMS2-214ENST00000476932 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
LIMS2-214ENST00000476932 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
LIMS2-214ENST00000476932 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
LIMS2-214ENST00000476932 KRTAP2-3P0C7H8 128 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms