RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 SMR3AQ99954 134 aa1.33□□□□□ -2.2
SDHB-205ENST00000475506 LAMA5O15230 3695 aa1.33□□□□□ -2.2
SDHB-205ENST00000475506 TENM4Q6N022 2769 aa1.32□□□□□ -2.2
SDHB-205ENST00000475506 NBPF19A0A087WUL8 3843 aa1.32□□□□□ -2.2
SDHB-205ENST00000475506 DMBT1Q9UGM3 2413 aaPredicted RBP1.32□□□□□ -2.2
SDHB-205ENST00000475506 TGP01266 2768 aa1.32□□□□□ -2.2
SDHB-205ENST00000475506 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
SDHB-205ENST00000475506 ASPMQ8IZT6 3477 aa1.32□□□□□ -2.2
SDHB-205ENST00000475506 HECTD1Q9ULT8 2610 aa1.32□□□□□ -2.2
SDHB-205ENST00000475506 ACACBO00763 2458 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 MEGF8Q7Z7M0 2845 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 ACANP16112 2415 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 VWFP04275 2813 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 LRRK2Q5S007 2527 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 EYSQ5T1H1 3165 aa1.31□□□□□ -2.2
SDHB-205ENST00000475506 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
SDHB-205ENST00000475506 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
SDHB-205ENST00000475506 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
SDHB-205ENST00000475506 ABCA12Q86UK0 2595 aa1.3□□□□□ -2.2
SDHB-205ENST00000475506 CFAP46Q8IYW2 2715 aa1.3□□□□□ -2.2
SDHB-205ENST00000475506 RELNP78509 3460 aa1.3□□□□□ -2.2
SDHB-205ENST00000475506 CACNA1AO00555 2505 aa1.29□□□□□ -2.2
SDHB-205ENST00000475506 EPG5Q9HCE0 2579 aa1.29□□□□□ -2.2
SDHB-205ENST00000475506 NIPBLQ6KC79 2804 aaeCLIP1.29□□□□□ -2.2
SDHB-205ENST00000475506 FASNP49327 2511 aaKnown RBP1.28□□□□□ -2.2
SDHB-205ENST00000475506 SETD2Q9BYW2 2564 aaPredicted RBP1.28□□□□□ -2.2
SDHB-205ENST00000475506 SVEP1Q4LDE5 3571 aa1.28□□□□□ -2.21
SDHB-205ENST00000475506 PDZD2O15018 2839 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 VPS13DQ5THJ4 4388 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 BSNQ9UPA5 3926 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 FBN2P35556 2912 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 HIVEP1P15822 2718 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 MYO18BQ8IUG5 2567 aa1.27□□□□□ -2.21
SDHB-205ENST00000475506 STAB2Q8WWQ8 2551 aa1.26□□□□□ -2.21
SDHB-205ENST00000475506 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
SDHB-205ENST00000475506 DNAH1Q9P2D7 4330 aa1.26□□□□□ -2.21
SDHB-205ENST00000475506 NBEAL1Q6ZS30 2694 aa1.25□□□□□ -2.21
SDHB-205ENST00000475506 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 POLQO75417 2590 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 TRRAPQ9Y4A5 3859 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 CSMD2Q7Z408 3487 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 VPS13CQ709C8 3753 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 MUC3AQ02505 3323 aa1.24□□□□□ -2.21
SDHB-205ENST00000475506 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
SDHB-205ENST00000475506 ANK3Q12955 4377 aaKnown RBP1.23□□□□□ -2.21
SDHB-205ENST00000475506 ZANQ9Y493 2812 aa1.22□□□□□ -2.21
SDHB-205ENST00000475506 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
SDHB-205ENST00000475506 ZNF292O60281 2723 aa1.22□□□□□ -2.21
SDHB-205ENST00000475506 BDP1A6H8Y1 2624 aa1.21□□□□□ -2.22
SDHB-205ENST00000475506 PKD1L1Q8TDX9 2849 aa1.21□□□□□ -2.22
SDHB-205ENST00000475506 ITPR2Q14571 2701 aa1.21□□□□□ -2.22
SDHB-205ENST00000475506 NSD1Q96L73 2696 aaPredicted RBP1.21□□□□□ -2.22
SDHB-205ENST00000475506 MAST4O15021 2626 aa1.21□□□□□ -2.22
SDHB-205ENST00000475506 FLNAP21333 2647 aaKnown RBP1.21□□□□□ -2.22
SDHB-205ENST00000475506 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
SDHB-205ENST00000475506 CMYA5Q8N3K9 4069 aa1.2□□□□□ -2.22
SDHB-205ENST00000475506 ATRQ13535 2644 aa1.2□□□□□ -2.22
SDHB-205ENST00000475506 CUBNO60494 3623 aa1.2□□□□□ -2.22
SDHB-205ENST00000475506 ANK2Q01484 3957 aa1.2□□□□□ -2.22
SDHB-205ENST00000475506 DNAH3Q8TD57 4116 aa1.2□□□□□ -2.22
SDHB-205ENST00000475506 CSMD3Q7Z407 3707 aa1.19□□□□□ -2.22
SDHB-205ENST00000475506 ZNF469Q96JG9 3925 aaPredicted RBP1.19□□□□□ -2.22
SDHB-205ENST00000475506 DNAH8Q96JB1 4490 aa1.19□□□□□ -2.22
SDHB-205ENST00000475506 SMR3BP02814 79 aaPredicted RBP1.19□□□□□ -2.22
SDHB-205ENST00000475506 LYSTQ99698 3801 aa1.19□□□□□ -2.22
SDHB-205ENST00000475506 TENM3Q9P273 2699 aa1.19□□□□□ -2.22
SDHB-205ENST00000475506 STAB1Q9NY15 2570 aa1.17□□□□□ -2.22
SDHB-205ENST00000475506 FLNBO75369 2602 aaKnown RBP1.17□□□□□ -2.22
SDHB-205ENST00000475506 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
SDHB-205ENST00000475506 MGAM2Q2M2H8 2515 aa1.16□□□□□ -2.22
SDHB-205ENST00000475506 USP24Q9UPU5 2620 aa1.16□□□□□ -2.22
SDHB-205ENST00000475506 DNAH6Q9C0G6 4158 aa1.16□□□□□ -2.22
SDHB-205ENST00000475506 DNAH9Q9NYC9 4486 aa1.15□□□□□ -2.22
SDHB-205ENST00000475506 M0R2T5 61 aa1.15□□□□□ -2.23
SDHB-205ENST00000475506 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
SDHB-205ENST00000475506 IGSF10Q6WRI0 2623 aa1.15□□□□□ -2.23
SDHB-205ENST00000475506 DNAH10Q8IVF4 4471 aa1.15□□□□□ -2.23
SDHB-205ENST00000475506 DNAH17Q9UFH2 4485 aa1.14□□□□□ -2.23
SDHB-205ENST00000475506 PRKDCP78527 4128 aaKnown RBP1.14□□□□□ -2.23
SDHB-205ENST00000475506 DNAH7Q8WXX0 4024 aa1.14□□□□□ -2.23
SDHB-205ENST00000475506 HUWE1Q7Z6Z7 4374 aaKnown RBP1.14□□□□□ -2.23
SDHB-205ENST00000475506 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
SDHB-205ENST00000475506 DNAH11Q96DT5 4516 aa1.13□□□□□ -2.23
SDHB-205ENST00000475506 HECTD4Q9Y4D8 3996 aa1.12□□□□□ -2.23
SDHB-205ENST00000475506 DNAH2Q9P225 4427 aa1.12□□□□□ -2.23
SDHB-205ENST00000475506 KMT2AQ03164 3969 aa1.11□□□□□ -2.23
SDHB-205ENST00000475506 FLNCQ14315 2725 aa1.11□□□□□ -2.23
SDHB-205ENST00000475506 MYCBP2O75592 4640 aa1.09□□□□□ -2.24
SDHB-205ENST00000475506 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
SDHB-205ENST00000475506 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
SDHB-205ENST00000475506 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
SDHB-205ENST00000475506 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
SDHB-205ENST00000475506 PKD1P98161 4303 aa1.06□□□□□ -2.24
SDHB-205ENST00000475506 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
SDHB-205ENST00000475506 PKHD1P08F94 4074 aa1.04□□□□□ -2.24
SDHB-205ENST00000475506 FLGP20930 4061 aaPredicted RBP1.03□□□□□ -2.24
SDHB-205ENST00000475506 PKHD1L1Q86WI1 4243 aa1.03□□□□□ -2.24
SDHB-205ENST00000475506 HSPG2P98160 4391 aa1.03□□□□□ -2.24
SDHB-205ENST00000475506 VPS13BQ7Z7G8 4022 aa1.03□□□□□ -2.25
SDHB-205ENST00000475506 LRP1Q07954 4544 aaKnown RBP1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms