RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 LCA10Q71F78 164 aa5.51□□□□□ -1.53
SKA3-206ENST00000475251 BPY2O14599 106 aa5.5□□□□□ -1.53
SKA3-206ENST00000475251 CASC2Q6XLA1 102 aa5.5□□□□□ -1.53
SKA3-206ENST00000475251 CRIPTQ9P021 101 aa5.5□□□□□ -1.53
SKA3-206ENST00000475251 SPRR2EP22531 72 aa5.49□□□□□ -1.53
SKA3-206ENST00000475251 SPRR2BP35325 72 aa5.49□□□□□ -1.53
SKA3-206ENST00000475251 SPRR2AP35326 72 aa5.49□□□□□ -1.53
SKA3-206ENST00000475251 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
SKA3-206ENST00000475251 C1orf64Q8NEQ6 169 aa5.48□□□□□ -1.53
SKA3-206ENST00000475251 PYY3Q5JQD4 70 aa5.46□□□□□ -1.54
SKA3-206ENST00000475251 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
SKA3-206ENST00000475251 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
SKA3-206ENST00000475251 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
SKA3-206ENST00000475251 Q8N9L7 120 aa5.4□□□□□ -1.54
SKA3-206ENST00000475251 NAA38Q9BRA0 125 aaKnown RBP5.4□□□□□ -1.54
SKA3-206ENST00000475251 M0R143 59 aa5.39□□□□□ -1.55
SKA3-206ENST00000475251 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
SKA3-206ENST00000475251 H3BT86 120 aa5.34□□□□□ -1.55
SKA3-206ENST00000475251 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
SKA3-206ENST00000475251 TSTD3H0UI37 97 aa5.32□□□□□ -1.56
SKA3-206ENST00000475251 SPRR2DP22532 72 aa5.32□□□□□ -1.56
SKA3-206ENST00000475251 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
SKA3-206ENST00000475251 H0YAA0 97 aa5.28□□□□□ -1.56
SKA3-206ENST00000475251 A8MUN3 132 aa5.27□□□□□ -1.57
SKA3-206ENST00000475251 MT1XP80297 61 aa5.27□□□□□ -1.57
SKA3-206ENST00000475251 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
SKA3-206ENST00000475251 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
SKA3-206ENST00000475251 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
SKA3-206ENST00000475251 NDUFC1O43677 76 aa5.24□□□□□ -1.57
SKA3-206ENST00000475251 A0A087WVE0 104 aa5.22□□□□□ -1.57
SKA3-206ENST00000475251 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
SKA3-206ENST00000475251 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
SKA3-206ENST00000475251 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
SKA3-206ENST00000475251 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
SKA3-206ENST00000475251 BATFQ16520 125 aa5.16□□□□□ -1.58
SKA3-206ENST00000475251 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
SKA3-206ENST00000475251 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
SKA3-206ENST00000475251 R4GN34 69 aa5.12□□□□□ -1.59
SKA3-206ENST00000475251 K7EP34 96 aa5.1□□□□□ -1.59
SKA3-206ENST00000475251 ACYP1P07311 99 aa5.1□□□□□ -1.59
SKA3-206ENST00000475251 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
SKA3-206ENST00000475251 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
SKA3-206ENST00000475251 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
SKA3-206ENST00000475251 SPCS1Q9Y6A9 102 aa5.07□□□□□ -1.6
SKA3-206ENST00000475251 M0QZ58 72 aa5.05□□□□□ -1.6
SKA3-206ENST00000475251 ATOX1O00244 68 aa5.04□□□□□ -1.6
SKA3-206ENST00000475251 SMIM6P0DI80 62 aa5.02□□□□□ -1.61
SKA3-206ENST00000475251 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
SKA3-206ENST00000475251 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
SKA3-206ENST00000475251 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
SKA3-206ENST00000475251 UQCRQO14949 82 aa4.99□□□□□ -1.61
SKA3-206ENST00000475251 H0Y9P7 68 aa4.98□□□□□ -1.61
SKA3-206ENST00000475251 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
SKA3-206ENST00000475251 P0C880 135 aa4.97□□□□□ -1.61
SKA3-206ENST00000475251 PRO0461Q9UI25 63 aa4.96□□□□□ -1.62
SKA3-206ENST00000475251 PCP4P48539 62 aa4.91□□□□□ -1.62
SKA3-206ENST00000475251 LINC00208Q96KT6 92 aa4.87□□□□□ -1.63
SKA3-206ENST00000475251 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
SKA3-206ENST00000475251 ATP5EP2Q5VTU8 51 aa4.86□□□□□ -1.63
SKA3-206ENST00000475251 MT-ATP8P03928 68 aa4.85□□□□□ -1.63
SKA3-206ENST00000475251 MP68P56378 58 aa4.84□□□□□ -1.63
SKA3-206ENST00000475251 F8W1H4 67 aa4.83□□□□□ -1.64
SKA3-206ENST00000475251 COL5A1-AS1Q5SY13 56 aa4.83□□□□□ -1.64
SKA3-206ENST00000475251 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
SKA3-206ENST00000475251 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
SKA3-206ENST00000475251 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
SKA3-206ENST00000475251 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
SKA3-206ENST00000475251 FAM240AA0A1B0GVK7 77 aa4.74□□□□□ -1.65
SKA3-206ENST00000475251 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SKA3-206ENST00000475251 H3BPC8 53 aa4.71□□□□□ -1.66
SKA3-206ENST00000475251 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
SKA3-206ENST00000475251 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
SKA3-206ENST00000475251 TRAV7A0A075B6U4 112 aa4.7□□□□□ -1.66
SKA3-206ENST00000475251 MT1EP04732 61 aa4.7□□□□□ -1.66
SKA3-206ENST00000475251 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
SKA3-206ENST00000475251 SPTSSBQ8NFR3 76 aa4.68□□□□□ -1.66
SKA3-206ENST00000475251 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
SKA3-206ENST00000475251 MT4P47944 62 aa4.66□□□□□ -1.66
SKA3-206ENST00000475251 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
SKA3-206ENST00000475251 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
SKA3-206ENST00000475251 LINC00643Q86TS7 51 aa4.64□□□□□ -1.67
SKA3-206ENST00000475251 MT1GP13640 62 aa4.63□□□□□ -1.67
SKA3-206ENST00000475251 ACYP2P14621 99 aa4.62□□□□□ -1.67
SKA3-206ENST00000475251 LOC105371267A0A1B0GV96 52 aa4.6□□□□□ -1.67
SKA3-206ENST00000475251 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SKA3-206ENST00000475251 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
SKA3-206ENST00000475251 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
SKA3-206ENST00000475251 CHKB-CPT1BH3BT56 60 aa4.55□□□□□ -1.68
SKA3-206ENST00000475251 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
SKA3-206ENST00000475251 SCGB1A1P11684 91 aa4.52□□□□□ -1.69
SKA3-206ENST00000475251 A0A0D9SG42 100 aa4.51□□□□□ -1.69
SKA3-206ENST00000475251 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SKA3-206ENST00000475251 MT1MQ8N339 61 aa4.51□□□□□ -1.69
SKA3-206ENST00000475251 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
SKA3-206ENST00000475251 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SKA3-206ENST00000475251 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
SKA3-206ENST00000475251 MT1LQ93083 61 aa4.43□□□□□ -1.7
SKA3-206ENST00000475251 MT3P25713 68 aa4.39□□□□□ -1.71
SKA3-206ENST00000475251 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SKA3-206ENST00000475251 PCP4L1A6NKN8 68 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms