RNA–Protein interactions for RNA: ENST00000474783.2

PAX6-216, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 4,392 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-216ENST00000474783 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
PAX6-216ENST00000474783 INE1O15225 51 aa4.48□□□□□ -1.69
PAX6-216ENST00000474783 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
PAX6-216ENST00000474783 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
PAX6-216ENST00000474783 SRRM2Q9UQ35 2752 aaKnown RBP4.47□□□□□ -1.69
PAX6-216ENST00000474783 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
PAX6-216ENST00000474783 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
PAX6-216ENST00000474783 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
PAX6-216ENST00000474783 TPRXLQ17RH7 258 aa4.4□□□□□ -1.7
PAX6-216ENST00000474783 KRTAP13-2Q52LG2 175 aa4.39□□□□□ -1.71
PAX6-216ENST00000474783 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
PAX6-216ENST00000474783 LRP1BQ9NZR2 4599 aa4.38□□□□□ -1.71
PAX6-216ENST00000474783 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
PAX6-216ENST00000474783 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
PAX6-216ENST00000474783 H0YAA0 97 aa4.35□□□□□ -1.71
PAX6-216ENST00000474783 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.71
PAX6-216ENST00000474783 TNP1P09430 55 aa4.29□□□□□ -1.72
PAX6-216ENST00000474783 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
PAX6-216ENST00000474783 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
PAX6-216ENST00000474783 TNXBP22105 4242 aa4.24□□□□□ -1.73
PAX6-216ENST00000474783 HSPG2P98160 4391 aa4.23□□□□□ -1.73
PAX6-216ENST00000474783 XP32Q5T750 250 aa4.22□□□□□ -1.73
PAX6-216ENST00000474783 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.73
PAX6-216ENST00000474783 A0A1B0GVY2 172 aa4.21□□□□□ -1.74
PAX6-216ENST00000474783 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
PAX6-216ENST00000474783 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
PAX6-216ENST00000474783 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
PAX6-216ENST00000474783 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
PAX6-216ENST00000474783 FAT1Q14517 4588 aa4.12□□□□□ -1.75
PAX6-216ENST00000474783 RYR2Q92736 4967 aa4.12□□□□□ -1.75
PAX6-216ENST00000474783 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
PAX6-216ENST00000474783 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
PAX6-216ENST00000474783 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
PAX6-216ENST00000474783 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
PAX6-216ENST00000474783 RYR3Q15413 4870 aa3.96□□□□□ -1.77
PAX6-216ENST00000474783 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
PAX6-216ENST00000474783 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
PAX6-216ENST00000474783 RYR1P21817 5038 aa3.91□□□□□ -1.78
PAX6-216ENST00000474783 KRTAP3-3Q9BYR6 98 aa3.91□□□□□ -1.78
PAX6-216ENST00000474783 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
PAX6-216ENST00000474783 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
PAX6-216ENST00000474783 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
PAX6-216ENST00000474783 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
PAX6-216ENST00000474783 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
PAX6-216ENST00000474783 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.79
PAX6-216ENST00000474783 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.8
PAX6-216ENST00000474783 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
PAX6-216ENST00000474783 LPAP08519 4548 aa3.79□□□□□ -1.8
PAX6-216ENST00000474783 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
PAX6-216ENST00000474783 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
PAX6-216ENST00000474783 HERC2O95714 4834 aa3.72□□□□□ -1.81
PAX6-216ENST00000474783 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
PAX6-216ENST00000474783 LRP2P98164 4655 aa3.68□□□□□ -1.82
PAX6-216ENST00000474783 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
PAX6-216ENST00000474783 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
PAX6-216ENST00000474783 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
PAX6-216ENST00000474783 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
PAX6-216ENST00000474783 HERC1Q15751 4861 aa3.52□□□□□ -1.85
PAX6-216ENST00000474783 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
PAX6-216ENST00000474783 LCE2BO14633 110 aa3.49□□□□□ -1.85
PAX6-216ENST00000474783 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
PAX6-216ENST00000474783 MT3P25713 68 aa3.47□□□□□ -1.85
PAX6-216ENST00000474783 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
PAX6-216ENST00000474783 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
PAX6-216ENST00000474783 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
PAX6-216ENST00000474783 MUC2Q02817 5179 aa3.42□□□□□ -1.86
PAX6-216ENST00000474783 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
PAX6-216ENST00000474783 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PAX6-216ENST00000474783 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
PAX6-216ENST00000474783 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
PAX6-216ENST00000474783 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
PAX6-216ENST00000474783 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
PAX6-216ENST00000474783 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
PAX6-216ENST00000474783 MT1HP80294 61 aa3.28□□□□□ -1.89
PAX6-216ENST00000474783 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
PAX6-216ENST00000474783 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
PAX6-216ENST00000474783 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
PAX6-216ENST00000474783 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
PAX6-216ENST00000474783 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
PAX6-216ENST00000474783 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.89
PAX6-216ENST00000474783 MT2AP02795 61 aa3.19□□□□□ -1.9
PAX6-216ENST00000474783 MT1FP04733 61 aa3.16□□□□□ -1.9
PAX6-216ENST00000474783 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
PAX6-216ENST00000474783 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
PAX6-216ENST00000474783 SPRR2EP22531 72 aa3.12□□□□□ -1.91
PAX6-216ENST00000474783 SPRR2BP35325 72 aa3.12□□□□□ -1.91
PAX6-216ENST00000474783 SPRR2AP35326 72 aa3.12□□□□□ -1.91
PAX6-216ENST00000474783 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
PAX6-216ENST00000474783 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
PAX6-216ENST00000474783 SPRR2DP22532 72 aa3.05□□□□□ -1.92
PAX6-216ENST00000474783 MT1BP07438 61 aa3.05□□□□□ -1.92
PAX6-216ENST00000474783 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
PAX6-216ENST00000474783 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
PAX6-216ENST00000474783 MT1XP80297 61 aa3.02□□□□□ -1.93
PAX6-216ENST00000474783 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
PAX6-216ENST00000474783 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
PAX6-216ENST00000474783 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.93
PAX6-216ENST00000474783 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
PAX6-216ENST00000474783 USH2AO75445 5202 aa2.92□□□□□ -1.94
PAX6-216ENST00000474783 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms