RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
LSS-208ENST00000474319 MYCBP2O75592 4640 aa5.84□□□□□ -1.47
LSS-208ENST00000474319 H0YAA0 97 aa5.8□□□□□ -1.48
LSS-208ENST00000474319 RYR1P21817 5038 aa5.79□□□□□ -1.48
LSS-208ENST00000474319 A0A0D9SG42 100 aa5.78□□□□□ -1.48
LSS-208ENST00000474319 A0A1B0GU33 70 aa5.78□□□□□ -1.48
LSS-208ENST00000474319 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
LSS-208ENST00000474319 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
LSS-208ENST00000474319 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
LSS-208ENST00000474319 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
LSS-208ENST00000474319 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
LSS-208ENST00000474319 HSPG2P98160 4391 aa5.69□□□□□ -1.5
LSS-208ENST00000474319 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
LSS-208ENST00000474319 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
LSS-208ENST00000474319 A8MUU9 505 aa5.66□□□□□ -1.5
LSS-208ENST00000474319 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
LSS-208ENST00000474319 P0C880 135 aa5.63□□□□□ -1.51
LSS-208ENST00000474319 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
LSS-208ENST00000474319 KRTAP10-8P60410 259 aa5.59□□□□□ -1.52
LSS-208ENST00000474319 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
LSS-208ENST00000474319 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
LSS-208ENST00000474319 HERC2O95714 4834 aa5.55□□□□□ -1.52
LSS-208ENST00000474319 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
LSS-208ENST00000474319 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
LSS-208ENST00000474319 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
LSS-208ENST00000474319 LPAP08519 4548 aa5.52□□□□□ -1.53
LSS-208ENST00000474319 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
LSS-208ENST00000474319 S4R3F8 94 aa5.49□□□□□ -1.53
LSS-208ENST00000474319 LRP2P98164 4655 aa5.49□□□□□ -1.53
LSS-208ENST00000474319 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
LSS-208ENST00000474319 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
LSS-208ENST00000474319 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
LSS-208ENST00000474319 XP32Q5T750 250 aa5.46□□□□□ -1.54
LSS-208ENST00000474319 TNXBP22105 4242 aa5.41□□□□□ -1.54
LSS-208ENST00000474319 HERC1Q15751 4861 aa5.41□□□□□ -1.54
LSS-208ENST00000474319 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
LSS-208ENST00000474319 KRTAP3-2Q9BYR7 98 aa5.4□□□□□ -1.54
LSS-208ENST00000474319 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
LSS-208ENST00000474319 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
LSS-208ENST00000474319 MUC2Q02817 5179 aa5.38□□□□□ -1.55
LSS-208ENST00000474319 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
LSS-208ENST00000474319 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
LSS-208ENST00000474319 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
LSS-208ENST00000474319 M0QZ58 72 aa5.26□□□□□ -1.57
LSS-208ENST00000474319 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
LSS-208ENST00000474319 R4GN34 69 aa5.21□□□□□ -1.58
LSS-208ENST00000474319 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
LSS-208ENST00000474319 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.58
LSS-208ENST00000474319 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
LSS-208ENST00000474319 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
LSS-208ENST00000474319 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
LSS-208ENST00000474319 M0R2T5 61 aa5.07□□□□□ -1.6
LSS-208ENST00000474319 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
LSS-208ENST00000474319 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
LSS-208ENST00000474319 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
LSS-208ENST00000474319 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
LSS-208ENST00000474319 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
LSS-208ENST00000474319 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
LSS-208ENST00000474319 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
LSS-208ENST00000474319 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
LSS-208ENST00000474319 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
LSS-208ENST00000474319 TNP1P09430 55 aa4.68□□□□□ -1.66
LSS-208ENST00000474319 MT1HP80294 61 aa4.65□□□□□ -1.66
LSS-208ENST00000474319 LCE2CQ5TA81 110 aa4.65□□□□□ -1.67
LSS-208ENST00000474319 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
LSS-208ENST00000474319 USH2AO75445 5202 aa4.59□□□□□ -1.67
LSS-208ENST00000474319 MT1FP04733 61 aa4.53□□□□□ -1.68
LSS-208ENST00000474319 MT2AP02795 61 aa4.51□□□□□ -1.69
LSS-208ENST00000474319 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
LSS-208ENST00000474319 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
LSS-208ENST00000474319 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
LSS-208ENST00000474319 INE1O15225 51 aa4.4□□□□□ -1.71
LSS-208ENST00000474319 KMT2DO14686 5537 aa4.36□□□□□ -1.71
LSS-208ENST00000474319 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
LSS-208ENST00000474319 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
LSS-208ENST00000474319 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
LSS-208ENST00000474319 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
LSS-208ENST00000474319 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
LSS-208ENST00000474319 LCE2BO14633 110 aa4.23□□□□□ -1.73
LSS-208ENST00000474319 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
LSS-208ENST00000474319 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
LSS-208ENST00000474319 KRTAP10-5P60370 271 aa4.21□□□□□ -1.73
LSS-208ENST00000474319 MT1XP80297 61 aa4.21□□□□□ -1.73
LSS-208ENST00000474319 MT1BP07438 61 aa4.21□□□□□ -1.74
LSS-208ENST00000474319 KRTAP8-1Q8IUC2 63 aa4.14□□□□□ -1.75
LSS-208ENST00000474319 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
LSS-208ENST00000474319 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
LSS-208ENST00000474319 KRTAP4-8A0A0G2JLE6 195 aa4.07□□□□□ -1.76
LSS-208ENST00000474319 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
LSS-208ENST00000474319 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
LSS-208ENST00000474319 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
LSS-208ENST00000474319 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
LSS-208ENST00000474319 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
LSS-208ENST00000474319 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
LSS-208ENST00000474319 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
LSS-208ENST00000474319 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
LSS-208ENST00000474319 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
LSS-208ENST00000474319 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
LSS-208ENST00000474319 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
LSS-208ENST00000474319 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms