RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
ECHDC1-214ENST00000474289 FAT1Q14517 4588 aa9.62□□□□□ -0.87
ECHDC1-214ENST00000474289 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
ECHDC1-214ENST00000474289 DYNC1H1Q14204 4646 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-214ENST00000474289 KRTAP15-1Q3LI76 137 aa9.57□□□□□ -0.88
ECHDC1-214ENST00000474289 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
ECHDC1-214ENST00000474289 NDUFAF8A1L188 74 aa9.55□□□□□ -0.88
ECHDC1-214ENST00000474289 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
ECHDC1-214ENST00000474289 S4R3F8 94 aa9.47□□□□□ -0.89
ECHDC1-214ENST00000474289 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
ECHDC1-214ENST00000474289 HSPG2P98160 4391 aa9.42□□□□□ -0.9
ECHDC1-214ENST00000474289 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
ECHDC1-214ENST00000474289 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
ECHDC1-214ENST00000474289 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
ECHDC1-214ENST00000474289 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
ECHDC1-214ENST00000474289 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
ECHDC1-214ENST00000474289 XP32Q5T750 250 aa9.27□□□□□ -0.92
ECHDC1-214ENST00000474289 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
ECHDC1-214ENST00000474289 TNXBP22105 4242 aa9.24□□□□□ -0.93
ECHDC1-214ENST00000474289 RYR2Q92736 4967 aa9.12□□□□□ -0.95
ECHDC1-214ENST00000474289 M0QZ58 72 aa9.08□□□□□ -0.96
ECHDC1-214ENST00000474289 LPAP08519 4548 aa9.05□□□□□ -0.96
ECHDC1-214ENST00000474289 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
ECHDC1-214ENST00000474289 Q5VSD8 79 aa8.96□□□□□ -0.98
ECHDC1-214ENST00000474289 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
ECHDC1-214ENST00000474289 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
ECHDC1-214ENST00000474289 LRP2P98164 4655 aa8.84□□□□□ -0.99
ECHDC1-214ENST00000474289 RYR1P21817 5038 aa8.8□□□□□ -1
ECHDC1-214ENST00000474289 A0A0A0MQY5 61 aa8.8□□□□□ -1
ECHDC1-214ENST00000474289 R4GN34 69 aa8.79□□□□□ -1
ECHDC1-214ENST00000474289 MT1HL1P0DM35 61 aa8.78□□□□□ -1
ECHDC1-214ENST00000474289 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
ECHDC1-214ENST00000474289 LUZP6Q538Z0 58 aa8.76□□□□□ -1.01
ECHDC1-214ENST00000474289 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
ECHDC1-214ENST00000474289 RYR3Q15413 4870 aa8.69□□□□□ -1.02
ECHDC1-214ENST00000474289 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-214ENST00000474289 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
ECHDC1-214ENST00000474289 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
ECHDC1-214ENST00000474289 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
ECHDC1-214ENST00000474289 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.07
ECHDC1-214ENST00000474289 EPPK1P58107 5090 aaKnown RBP8.38□□□□□ -1.07
ECHDC1-214ENST00000474289 KRTAP4-1Q9BYQ7 146 aa8.31□□□□□ -1.08
ECHDC1-214ENST00000474289 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
ECHDC1-214ENST00000474289 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-214ENST00000474289 SPRR5A0A1B0GTR4 108 aa8.2□□□□□ -1.1
ECHDC1-214ENST00000474289 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
ECHDC1-214ENST00000474289 TNP1P09430 55 aa8.14□□□□□ -1.11
ECHDC1-214ENST00000474289 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
ECHDC1-214ENST00000474289 MUC2Q02817 5179 aa8.09□□□□□ -1.12
ECHDC1-214ENST00000474289 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-214ENST00000474289 J3QL48 77 aa7.95□□□□□ -1.14
ECHDC1-214ENST00000474289 HERC2O95714 4834 aa7.9□□□□□ -1.14
ECHDC1-214ENST00000474289 HERC1Q15751 4861 aa7.86□□□□□ -1.15
ECHDC1-214ENST00000474289 PCLOQ9Y6V0 5065 aa7.86□□□□□ -1.15
ECHDC1-214ENST00000474289 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
ECHDC1-214ENST00000474289 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
ECHDC1-214ENST00000474289 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
ECHDC1-214ENST00000474289 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
ECHDC1-214ENST00000474289 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
ECHDC1-214ENST00000474289 INE1O15225 51 aa7.58□□□□□ -1.2
ECHDC1-214ENST00000474289 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
ECHDC1-214ENST00000474289 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
ECHDC1-214ENST00000474289 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
ECHDC1-214ENST00000474289 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
ECHDC1-214ENST00000474289 M0R2T5 61 aa7.39□□□□□ -1.23
ECHDC1-214ENST00000474289 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
ECHDC1-214ENST00000474289 MT1FP04733 61 aa7.32□□□□□ -1.24
ECHDC1-214ENST00000474289 MT1HP80294 61 aa7.32□□□□□ -1.24
ECHDC1-214ENST00000474289 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
ECHDC1-214ENST00000474289 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
ECHDC1-214ENST00000474289 MT2AP02795 61 aa7.28□□□□□ -1.24
ECHDC1-214ENST00000474289 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
ECHDC1-214ENST00000474289 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
ECHDC1-214ENST00000474289 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
ECHDC1-214ENST00000474289 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
ECHDC1-214ENST00000474289 MT1XP80297 61 aa7.17□□□□□ -1.26
ECHDC1-214ENST00000474289 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
ECHDC1-214ENST00000474289 MT1BP07438 61 aa7.11□□□□□ -1.27
ECHDC1-214ENST00000474289 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-214ENST00000474289 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
ECHDC1-214ENST00000474289 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
ECHDC1-214ENST00000474289 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
ECHDC1-214ENST00000474289 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
ECHDC1-214ENST00000474289 KMT2DO14686 5537 aa6.7□□□□□ -1.34
ECHDC1-214ENST00000474289 USH2AO75445 5202 aa6.67□□□□□ -1.34
ECHDC1-214ENST00000474289 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-214ENST00000474289 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
ECHDC1-214ENST00000474289 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
ECHDC1-214ENST00000474289 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
ECHDC1-214ENST00000474289 LCE2BO14633 110 aa6.6□□□□□ -1.35
ECHDC1-214ENST00000474289 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
ECHDC1-214ENST00000474289 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
ECHDC1-214ENST00000474289 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
ECHDC1-214ENST00000474289 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
ECHDC1-214ENST00000474289 MT1LQ93083 61 aa6.23□□□□□ -1.41
ECHDC1-214ENST00000474289 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.41
ECHDC1-214ENST00000474289 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-214ENST00000474289 MT1EP04732 61 aa6.15□□□□□ -1.43
ECHDC1-214ENST00000474289 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
ECHDC1-214ENST00000474289 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms