RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TMEM254Q8TBM7 123 aa1.64□□□□□ -2.15
XRN1-209ENST00000472625 LOC110117498A0A087WWA1 95 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 FAM236AA0A1B0GUQ0 79 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 FAM236BA0A1B0GV22 79 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 A6NN06 94 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 NDUFS5O43920 106 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 PRR15Q8IV56 129 aa1.63□□□□□ -2.15
XRN1-209ENST00000472625 MRPL34Q9BQ48 92 aaKnown RBP1.63□□□□□ -2.15
XRN1-209ENST00000472625 hDV103S1A0JD37 113 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 K7EQZ3 153 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 ATXN8Q156A1 80 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 NREPQ16612 68 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 Q5VV11 94 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 KMT2DO14686 5537 aa1.62□□□□□ -2.15
XRN1-209ENST00000472625 K7ERJ3 54 aa1.61□□□□□ -2.15
XRN1-209ENST00000472625 BAALC-AS2P0C853 105 aa1.61□□□□□ -2.15
XRN1-209ENST00000472625 UQCR10Q9UDW1 63 aa1.61□□□□□ -2.15
XRN1-209ENST00000472625 MMP24-AS1A0A0U1RRL7 71 aa1.6□□□□□ -2.15
XRN1-209ENST00000472625 M0R143 59 aa1.6□□□□□ -2.15
XRN1-209ENST00000472625 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
XRN1-209ENST00000472625 CSAG1Q6PB30 78 aa1.6□□□□□ -2.15
XRN1-209ENST00000472625 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
XRN1-209ENST00000472625 BPY2O14599 106 aa1.59□□□□□ -2.15
XRN1-209ENST00000472625 IMUPQ9GZP8 106 aa1.59□□□□□ -2.15
XRN1-209ENST00000472625 S4R3F8 94 aa1.59□□□□□ -2.15
XRN1-209ENST00000472625 CASC2Q6XLA1 102 aa1.58□□□□□ -2.16
XRN1-209ENST00000472625 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
XRN1-209ENST00000472625 C14orf132Q9NPU4 83 aa1.58□□□□□ -2.16
XRN1-209ENST00000472625 H3BT86 120 aa1.57□□□□□ -2.16
XRN1-209ENST00000472625 C5orf47Q569G3 176 aa1.57□□□□□ -2.16
XRN1-209ENST00000472625 PP632Q6XCG6 107 aa1.57□□□□□ -2.16
XRN1-209ENST00000472625 NAA38Q9BRA0 125 aaKnown RBP1.57□□□□□ -2.16
XRN1-209ENST00000472625 PRO2289Q9P1D8 64 aa1.57□□□□□ -2.16
XRN1-209ENST00000472625 HCG22E2RYF7 251 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 TSTD3H0UI37 97 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 KLKP1Q107X0 134 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 C4orf26Q17RF5 130 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 Q5W150 140 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 TP53AIP1Q9HCN2 124 aa1.56□□□□□ -2.16
XRN1-209ENST00000472625 PYY3Q5JQD4 70 aa1.55□□□□□ -2.16
XRN1-209ENST00000472625 C1orf64Q8NEQ6 169 aa1.55□□□□□ -2.16
XRN1-209ENST00000472625 UBL5Q9BZL1 73 aa1.55□□□□□ -2.16
XRN1-209ENST00000472625 MT1BP07438 61 aa1.54□□□□□ -2.16
XRN1-209ENST00000472625 LCA10Q71F78 164 aa1.54□□□□□ -2.16
XRN1-209ENST00000472625 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
XRN1-209ENST00000472625 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
XRN1-209ENST00000472625 H0YAA0 97 aa1.52□□□□□ -2.17
XRN1-209ENST00000472625 NDUFC1O43677 76 aa1.52□□□□□ -2.17
XRN1-209ENST00000472625 C20orf197Q8N268 126 aa1.52□□□□□ -2.17
XRN1-209ENST00000472625 LOC101927531A0A1B0GV80 90 aa1.51□□□□□ -2.17
XRN1-209ENST00000472625 A8MUN3 132 aa1.51□□□□□ -2.17
XRN1-209ENST00000472625 ATOX1O00244 68 aa1.51□□□□□ -2.17
XRN1-209ENST00000472625 Q8N9L7 120 aa1.51□□□□□ -2.17
XRN1-209ENST00000472625 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
XRN1-209ENST00000472625 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 SMIM6P0DI80 62 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 SPRR2EP22531 72 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 SPRR2BP35325 72 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 SPRR2AP35326 72 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
XRN1-209ENST00000472625 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 A0A1W2PPM0 123 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 ACYP1P07311 99 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 BATFQ16520 125 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
XRN1-209ENST00000472625 CYP4F30PQ9H0H9 118 aa1.48□□□□□ -2.17
XRN1-209ENST00000472625 SPCS1Q9Y6A9 102 aa1.48□□□□□ -2.17
XRN1-209ENST00000472625 R4GN34 69 aa1.48□□□□□ -2.17
XRN1-209ENST00000472625 ATP5EP2Q5VTU8 51 aa1.47□□□□□ -2.17
XRN1-209ENST00000472625 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
XRN1-209ENST00000472625 SPRR5A0A1B0GTR4 108 aa1.46□□□□□ -2.18
XRN1-209ENST00000472625 TAX1BP3O14907 124 aa1.46□□□□□ -2.18
XRN1-209ENST00000472625 SPRR2DP22532 72 aa1.46□□□□□ -2.18
XRN1-209ENST00000472625 ADM2Q7Z4H4 148 aa1.46□□□□□ -2.18
XRN1-209ENST00000472625 UQCRQO14949 82 aa1.45□□□□□ -2.18
XRN1-209ENST00000472625 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
XRN1-209ENST00000472625 H0Y9P7 68 aa1.44□□□□□ -2.18
XRN1-209ENST00000472625 MP68P56378 58 aa1.44□□□□□ -2.18
XRN1-209ENST00000472625 MT1XP80297 61 aa1.44□□□□□ -2.18
XRN1-209ENST00000472625 GTF2H5Q6ZYL4 71 aa1.44□□□□□ -2.18
XRN1-209ENST00000472625 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
XRN1-209ENST00000472625 F8W1H4 67 aa1.43□□□□□ -2.18
XRN1-209ENST00000472625 K7EP34 96 aa1.43□□□□□ -2.18
XRN1-209ENST00000472625 M0QZ58 72 aa1.43□□□□□ -2.18
XRN1-209ENST00000472625 COL5A1-AS1Q5SY13 56 aa1.43□□□□□ -2.18
XRN1-209ENST00000472625 FAM240AA0A1B0GVK7 77 aa1.42□□□□□ -2.18
XRN1-209ENST00000472625 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
XRN1-209ENST00000472625 H3BPC8 53 aa1.41□□□□□ -2.18
XRN1-209ENST00000472625 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
XRN1-209ENST00000472625 A0A087WVE0 104 aa1.4□□□□□ -2.19
XRN1-209ENST00000472625 MT-ATP8P03928 68 aa1.4□□□□□ -2.19
XRN1-209ENST00000472625 LINC01554Q52M75 96 aa1.4□□□□□ -2.19
XRN1-209ENST00000472625 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
XRN1-209ENST00000472625 LINC00208Q96KT6 92 aa1.4□□□□□ -2.19
XRN1-209ENST00000472625 ETDBQ3ZM63 59 aa1.39□□□□□ -2.19
XRN1-209ENST00000472625 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
XRN1-209ENST00000472625 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
XRN1-209ENST00000472625 P0C880 135 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms