RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 K7ERS5 55 aa6.01□□□□□ -1.45
CHMP2B-203ENST00000471660 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
CHMP2B-203ENST00000471660 Q5VSD8 79 aa6□□□□□ -1.45
CHMP2B-203ENST00000471660 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
CHMP2B-203ENST00000471660 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
CHMP2B-203ENST00000471660 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
CHMP2B-203ENST00000471660 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
CHMP2B-203ENST00000471660 SPINK1P00995 79 aa5.96□□□□□ -1.46
CHMP2B-203ENST00000471660 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
CHMP2B-203ENST00000471660 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
CHMP2B-203ENST00000471660 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.47
CHMP2B-203ENST00000471660 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
CHMP2B-203ENST00000471660 CIRBP-AS1Q8TBR5 109 aa5.88□□□□□ -1.47
CHMP2B-203ENST00000471660 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
CHMP2B-203ENST00000471660 FAT1Q14517 4588 aa5.85□□□□□ -1.47
CHMP2B-203ENST00000471660 KRTAP10-2P60368 255 aa5.84□□□□□ -1.47
CHMP2B-203ENST00000471660 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
CHMP2B-203ENST00000471660 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
CHMP2B-203ENST00000471660 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
CHMP2B-203ENST00000471660 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
CHMP2B-203ENST00000471660 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
CHMP2B-203ENST00000471660 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
CHMP2B-203ENST00000471660 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
CHMP2B-203ENST00000471660 SMR3BP02814 79 aaPredicted RBP5.74□□□□□ -1.49
CHMP2B-203ENST00000471660 KRTAP1-4P0C5Y4 121 aa5.74□□□□□ -1.49
CHMP2B-203ENST00000471660 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
CHMP2B-203ENST00000471660 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
CHMP2B-203ENST00000471660 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
CHMP2B-203ENST00000471660 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
CHMP2B-203ENST00000471660 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
CHMP2B-203ENST00000471660 TNXBP22105 4242 aa5.64□□□□□ -1.51
CHMP2B-203ENST00000471660 LRP2P98164 4655 aa5.62□□□□□ -1.51
CHMP2B-203ENST00000471660 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
CHMP2B-203ENST00000471660 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
CHMP2B-203ENST00000471660 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
CHMP2B-203ENST00000471660 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
CHMP2B-203ENST00000471660 MUC2Q02817 5179 aa5.59□□□□□ -1.52
CHMP2B-203ENST00000471660 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
CHMP2B-203ENST00000471660 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
CHMP2B-203ENST00000471660 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
CHMP2B-203ENST00000471660 XP32Q5T750 250 aa5.57□□□□□ -1.52
CHMP2B-203ENST00000471660 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
CHMP2B-203ENST00000471660 S4R3F8 94 aa5.56□□□□□ -1.52
CHMP2B-203ENST00000471660 A0A0D9SG42 100 aa5.54□□□□□ -1.52
CHMP2B-203ENST00000471660 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
CHMP2B-203ENST00000471660 KRTAP12-2P59991 146 aa5.48□□□□□ -1.53
CHMP2B-203ENST00000471660 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
CHMP2B-203ENST00000471660 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
CHMP2B-203ENST00000471660 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
CHMP2B-203ENST00000471660 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
CHMP2B-203ENST00000471660 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
CHMP2B-203ENST00000471660 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
CHMP2B-203ENST00000471660 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
CHMP2B-203ENST00000471660 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CHMP2B-203ENST00000471660 M0QZ58 72 aa5.27□□□□□ -1.57
CHMP2B-203ENST00000471660 LPAP08519 4548 aa5.22□□□□□ -1.57
CHMP2B-203ENST00000471660 MUC17Q685J3 4493 aa5.15□□□□□ -1.58
CHMP2B-203ENST00000471660 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
CHMP2B-203ENST00000471660 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
CHMP2B-203ENST00000471660 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
CHMP2B-203ENST00000471660 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
CHMP2B-203ENST00000471660 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
CHMP2B-203ENST00000471660 INE1O15225 51 aa4.95□□□□□ -1.62
CHMP2B-203ENST00000471660 R4GN34 69 aa4.91□□□□□ -1.62
CHMP2B-203ENST00000471660 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
CHMP2B-203ENST00000471660 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
CHMP2B-203ENST00000471660 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
CHMP2B-203ENST00000471660 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
CHMP2B-203ENST00000471660 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
CHMP2B-203ENST00000471660 MT1HP80294 61 aa4.8□□□□□ -1.64
CHMP2B-203ENST00000471660 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
CHMP2B-203ENST00000471660 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
CHMP2B-203ENST00000471660 USH2AO75445 5202 aa4.74□□□□□ -1.65
CHMP2B-203ENST00000471660 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
CHMP2B-203ENST00000471660 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
CHMP2B-203ENST00000471660 NEBP20929 6669 aa4.71□□□□□ -1.66
CHMP2B-203ENST00000471660 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
CHMP2B-203ENST00000471660 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
CHMP2B-203ENST00000471660 TNP1P09430 55 aa4.68□□□□□ -1.66
CHMP2B-203ENST00000471660 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
CHMP2B-203ENST00000471660 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
CHMP2B-203ENST00000471660 M0R2T5 61 aa4.6□□□□□ -1.67
CHMP2B-203ENST00000471660 FLGP20930 4061 aaPredicted RBP4.49□□□□□ -1.69
CHMP2B-203ENST00000471660 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
CHMP2B-203ENST00000471660 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
CHMP2B-203ENST00000471660 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
CHMP2B-203ENST00000471660 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
CHMP2B-203ENST00000471660 LCE2BO14633 110 aa4.43□□□□□ -1.7
CHMP2B-203ENST00000471660 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
CHMP2B-203ENST00000471660 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.7
CHMP2B-203ENST00000471660 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
CHMP2B-203ENST00000471660 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
CHMP2B-203ENST00000471660 MT2AP02795 61 aa4.3□□□□□ -1.72
CHMP2B-203ENST00000471660 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CHMP2B-203ENST00000471660 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
CHMP2B-203ENST00000471660 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
CHMP2B-203ENST00000471660 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
CHMP2B-203ENST00000471660 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
CHMP2B-203ENST00000471660 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
CHMP2B-203ENST00000471660 MT1FP04733 61 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms