RNA–Protein interactions for RNA: ENST00000470756.5

ALCAM-204, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 1 (best)

Gene ALCAM, Length 1,770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-204ENST00000470756 UBR4Q5T4S7 5183 aa10.38□□□□□ -0.75
ALCAM-204ENST00000470756 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
ALCAM-204ENST00000470756 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
ALCAM-204ENST00000470756 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
ALCAM-204ENST00000470756 MUC17Q685J3 4493 aa10.33□□□□□ -0.76
ALCAM-204ENST00000470756 A6NED7 52 aa10.3□□□□□ -0.76
ALCAM-204ENST00000470756 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
ALCAM-204ENST00000470756 A0A1B0GU69 56 aa10.29□□□□□ -0.76
ALCAM-204ENST00000470756 CDC42SE1Q9NRR8 79 aa10.21□□□□□ -0.78
ALCAM-204ENST00000470756 LCA10Q71F78 164 aa10.19□□□□□ -0.78
ALCAM-204ENST00000470756 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
ALCAM-204ENST00000470756 MUC2Q02817 5179 aa10.13□□□□□ -0.79
ALCAM-204ENST00000470756 A8MU10 97 aa10.13□□□□□ -0.79
ALCAM-204ENST00000470756 SEC61GP60059 68 aa10.13□□□□□ -0.79
ALCAM-204ENST00000470756 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
ALCAM-204ENST00000470756 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
ALCAM-204ENST00000470756 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
ALCAM-204ENST00000470756 UQCR11O14957 56 aa10.06□□□□□ -0.8
ALCAM-204ENST00000470756 SPATA8Q6RVD6 105 aa10.02□□□□□ -0.81
ALCAM-204ENST00000470756 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
ALCAM-204ENST00000470756 H1FX-AS1Q4G0G2 97 aa9.97□□□□□ -0.81
ALCAM-204ENST00000470756 S4R3F8 94 aa9.97□□□□□ -0.81
ALCAM-204ENST00000470756 RBM12B-AS1Q9P1G2 102 aa9.94□□□□□ -0.82
ALCAM-204ENST00000470756 PMAIP1Q13794 54 aa9.92□□□□□ -0.82
ALCAM-204ENST00000470756 A0A1B0GU33 70 aa9.86□□□□□ -0.83
ALCAM-204ENST00000470756 A6NN06 94 aa9.83□□□□□ -0.84
ALCAM-204ENST00000470756 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
ALCAM-204ENST00000470756 H0YAA0 97 aa9.76□□□□□ -0.85
ALCAM-204ENST00000470756 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
ALCAM-204ENST00000470756 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
ALCAM-204ENST00000470756 CSAG1Q6PB30 78 aa9.71□□□□□ -0.85
ALCAM-204ENST00000470756 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
ALCAM-204ENST00000470756 KTN1-AS1Q86SY8 53 aa9.65□□□□□ -0.87
ALCAM-204ENST00000470756 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
ALCAM-204ENST00000470756 P0C880 135 aa9.57□□□□□ -0.88
ALCAM-204ENST00000470756 FLGP20930 4061 aaPredicted RBP9.55□□□□□ -0.88
ALCAM-204ENST00000470756 MT1HP80294 61 aa9.55□□□□□ -0.88
ALCAM-204ENST00000470756 M0R2T5 61 aa9.51□□□□□ -0.89
ALCAM-204ENST00000470756 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
ALCAM-204ENST00000470756 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
ALCAM-204ENST00000470756 K7ERS5 55 aa9.47□□□□□ -0.89
ALCAM-204ENST00000470756 M0QZ58 72 aa9.4□□□□□ -0.9
ALCAM-204ENST00000470756 A0A0D9SG42 100 aa9.35□□□□□ -0.91
ALCAM-204ENST00000470756 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
ALCAM-204ENST00000470756 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
ALCAM-204ENST00000470756 R4GN34 69 aa9.2□□□□□ -0.94
ALCAM-204ENST00000470756 KRTAP12-1P59990 96 aa9.18□□□□□ -0.94
ALCAM-204ENST00000470756 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
ALCAM-204ENST00000470756 ROMO1P60602 79 aa9.14□□□□□ -0.95
ALCAM-204ENST00000470756 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
ALCAM-204ENST00000470756 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
ALCAM-204ENST00000470756 MT2AP02795 61 aa9.06□□□□□ -0.96
ALCAM-204ENST00000470756 LINC01554Q52M75 96 aa9.02□□□□□ -0.97
ALCAM-204ENST00000470756 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
ALCAM-204ENST00000470756 MT1FP04733 61 aa9.01□□□□□ -0.97
ALCAM-204ENST00000470756 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
ALCAM-204ENST00000470756 KRTAP25-1Q3LHN0 102 aa8.96□□□□□ -0.97
ALCAM-204ENST00000470756 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
ALCAM-204ENST00000470756 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
ALCAM-204ENST00000470756 LCE2BO14633 110 aa8.71□□□□□ -1.01
ALCAM-204ENST00000470756 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.01
ALCAM-204ENST00000470756 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
ALCAM-204ENST00000470756 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
ALCAM-204ENST00000470756 FSIP2Q5CZC0 6907 aa8.64□□□□□ -1.03
ALCAM-204ENST00000470756 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
ALCAM-204ENST00000470756 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
ALCAM-204ENST00000470756 KRTAP4-6Q9BYQ5 205 aa8.58□□□□□ -1.04
ALCAM-204ENST00000470756 USH2AO75445 5202 aa8.57□□□□□ -1.04
ALCAM-204ENST00000470756 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
ALCAM-204ENST00000470756 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
ALCAM-204ENST00000470756 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
ALCAM-204ENST00000470756 MT1BP07438 61 aa8.39□□□□□ -1.07
ALCAM-204ENST00000470756 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
ALCAM-204ENST00000470756 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
ALCAM-204ENST00000470756 TNP1P09430 55 aa8.33□□□□□ -1.08
ALCAM-204ENST00000470756 KRTAP9-6A0A140TA67 174 aa8.3□□□□□ -1.08
ALCAM-204ENST00000470756 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
ALCAM-204ENST00000470756 KRTAP19-6Q3LI70 58 aa8.21□□□□□ -1.1
ALCAM-204ENST00000470756 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
ALCAM-204ENST00000470756 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
ALCAM-204ENST00000470756 MT1XP80297 61 aa8.07□□□□□ -1.12
ALCAM-204ENST00000470756 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
ALCAM-204ENST00000470756 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
ALCAM-204ENST00000470756 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.14
ALCAM-204ENST00000470756 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
ALCAM-204ENST00000470756 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
ALCAM-204ENST00000470756 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
ALCAM-204ENST00000470756 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
ALCAM-204ENST00000470756 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
ALCAM-204ENST00000470756 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
ALCAM-204ENST00000470756 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
ALCAM-204ENST00000470756 KMT2DO14686 5537 aa7.66□□□□□ -1.18
ALCAM-204ENST00000470756 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
ALCAM-204ENST00000470756 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
ALCAM-204ENST00000470756 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
ALCAM-204ENST00000470756 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
ALCAM-204ENST00000470756 KRTAP9-7A8MTY7 169 aa7.53□□□□□ -1.2
ALCAM-204ENST00000470756 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
ALCAM-204ENST00000470756 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
ALCAM-204ENST00000470756 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 266 ms