RNA–Protein interactions for RNA: ENST00000470674.1

DDX1-205, Transcript of DEAD-box helicase 1, humanhuman

TSL 2

Gene DDX1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-205ENST00000470674 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
DDX1-205ENST00000470674 KRTAP13-2Q52LG2 175 aa2.59□□□□□ -1.99
DDX1-205ENST00000470674 SMR3AQ99954 134 aa2.59□□□□□ -1.99
DDX1-205ENST00000470674 ACANP16112 2415 aa2.58□□□□□ -2
DDX1-205ENST00000470674 NBEAL1Q6ZS30 2694 aa2.58□□□□□ -2
DDX1-205ENST00000470674 FASNP49327 2511 aaKnown RBP2.55□□□□□ -2
DDX1-205ENST00000470674 LCE3AQ5TA76 89 aa2.55□□□□□ -2
DDX1-205ENST00000470674 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
DDX1-205ENST00000470674 MAST4O15021 2626 aa2.54□□□□□ -2
DDX1-205ENST00000470674 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
DDX1-205ENST00000470674 CUBNO60494 3623 aa2.54□□□□□ -2
DDX1-205ENST00000470674 S4R3F8 94 aa2.53□□□□□ -2
DDX1-205ENST00000470674 FLNBO75369 2602 aaKnown RBP2.53□□□□□ -2.01
DDX1-205ENST00000470674 CACNA1AO00555 2505 aa2.52□□□□□ -2.01
DDX1-205ENST00000470674 TGP01266 2768 aa2.52□□□□□ -2.01
DDX1-205ENST00000470674 ATRQ13535 2644 aa2.52□□□□□ -2.01
DDX1-205ENST00000470674 ZNF469Q96JG9 3925 aaPredicted RBP2.52□□□□□ -2.01
DDX1-205ENST00000470674 COL6A5A8TX70 2615 aa2.52□□□□□ -2.01
DDX1-205ENST00000470674 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
DDX1-205ENST00000470674 ITPR2Q14571 2701 aa2.51□□□□□ -2.01
DDX1-205ENST00000470674 A0A0D9SG42 100 aa2.5□□□□□ -2.01
DDX1-205ENST00000470674 TRRAPQ9Y4A5 3859 aa2.49□□□□□ -2.01
DDX1-205ENST00000470674 NSD1Q96L73 2696 aaPredicted RBP2.49□□□□□ -2.01
DDX1-205ENST00000470674 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
DDX1-205ENST00000470674 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
DDX1-205ENST00000470674 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
DDX1-205ENST00000470674 ANK2Q01484 3957 aa2.48□□□□□ -2.01
DDX1-205ENST00000470674 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
DDX1-205ENST00000470674 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
DDX1-205ENST00000470674 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
DDX1-205ENST00000470674 COL7A1Q02388 2944 aa2.47□□□□□ -2.01
DDX1-205ENST00000470674 USP24Q9UPU5 2620 aa2.46□□□□□ -2.02
DDX1-205ENST00000470674 J3QKU1 62 aa2.46□□□□□ -2.02
DDX1-205ENST00000470674 M0QZ58 72 aa2.46□□□□□ -2.02
DDX1-205ENST00000470674 NOTCH1P46531 2555 aa2.46□□□□□ -2.02
DDX1-205ENST00000470674 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
DDX1-205ENST00000470674 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
DDX1-205ENST00000470674 LYSTQ99698 3801 aa2.45□□□□□ -2.02
DDX1-205ENST00000470674 DNAH9Q9NYC9 4486 aa2.44□□□□□ -2.02
DDX1-205ENST00000470674 VPS13DQ5THJ4 4388 aa2.44□□□□□ -2.02
DDX1-205ENST00000470674 DNAH10Q8IVF4 4471 aa2.44□□□□□ -2.02
DDX1-205ENST00000470674 DYNC2H1Q8NCM8 4307 aaKnown RBP2.44□□□□□ -2.02
DDX1-205ENST00000470674 STAB2Q8WWQ8 2551 aa2.43□□□□□ -2.02
DDX1-205ENST00000470674 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
DDX1-205ENST00000470674 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
DDX1-205ENST00000470674 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
DDX1-205ENST00000470674 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
DDX1-205ENST00000470674 MGAM2Q2M2H8 2515 aa2.41□□□□□ -2.02
DDX1-205ENST00000470674 DNAH7Q8WXX0 4024 aa2.4□□□□□ -2.02
DDX1-205ENST00000470674 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
DDX1-205ENST00000470674 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
DDX1-205ENST00000470674 DNAH17Q9UFH2 4485 aa2.39□□□□□ -2.03
DDX1-205ENST00000470674 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
DDX1-205ENST00000470674 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
DDX1-205ENST00000470674 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
DDX1-205ENST00000470674 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
DDX1-205ENST00000470674 STAB1Q9NY15 2570 aa2.36□□□□□ -2.03
DDX1-205ENST00000470674 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
DDX1-205ENST00000470674 DMBT1Q9UGM3 2413 aaPredicted RBP2.34□□□□□ -2.03
DDX1-205ENST00000470674 DNAH11Q96DT5 4516 aa2.32□□□□□ -2.04
DDX1-205ENST00000470674 DNAH2Q9P225 4427 aa2.32□□□□□ -2.04
DDX1-205ENST00000470674 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
DDX1-205ENST00000470674 INE1O15225 51 aa2.3□□□□□ -2.04
DDX1-205ENST00000470674 KMT2AQ03164 3969 aa2.29□□□□□ -2.04
DDX1-205ENST00000470674 R4GN34 69 aa2.27□□□□□ -2.05
DDX1-205ENST00000470674 SACSQ9NZJ4 4579 aa2.25□□□□□ -2.05
DDX1-205ENST00000470674 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
DDX1-205ENST00000470674 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
DDX1-205ENST00000470674 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
DDX1-205ENST00000470674 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
DDX1-205ENST00000470674 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
DDX1-205ENST00000470674 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
DDX1-205ENST00000470674 PKD1P98161 4303 aa2.2□□□□□ -2.06
DDX1-205ENST00000470674 Q5VSD8 79 aa2.19□□□□□ -2.06
DDX1-205ENST00000470674 PKHD1P08F94 4074 aa2.18□□□□□ -2.06
DDX1-205ENST00000470674 TNP1P09430 55 aa2.18□□□□□ -2.06
DDX1-205ENST00000470674 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
DDX1-205ENST00000470674 LRP1BQ9NZR2 4599 aa2.17□□□□□ -2.06
DDX1-205ENST00000470674 DNAH5Q8TE73 4624 aa2.16□□□□□ -2.06
DDX1-205ENST00000470674 SMR3BP02814 79 aaPredicted RBP2.16□□□□□ -2.06
DDX1-205ENST00000470674 TNXBP22105 4242 aa2.14□□□□□ -2.07
DDX1-205ENST00000470674 STARD9Q9P2P6 4700 aa2.14□□□□□ -2.07
DDX1-205ENST00000470674 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
DDX1-205ENST00000470674 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
DDX1-205ENST00000470674 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.08
DDX1-205ENST00000470674 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
DDX1-205ENST00000470674 HSPG2P98160 4391 aa2.07□□□□□ -2.08
DDX1-205ENST00000470674 FAT3Q8TDW7 4589 aa2.04□□□□□ -2.08
DDX1-205ENST00000470674 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
DDX1-205ENST00000470674 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.09
DDX1-205ENST00000470674 FAT1Q14517 4588 aa2.01□□□□□ -2.09
DDX1-205ENST00000470674 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
DDX1-205ENST00000470674 MT1HL1P0DM35 61 aa2□□□□□ -2.09
DDX1-205ENST00000470674 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
DDX1-205ENST00000470674 KRTAP19-2Q3LHN2 52 aa1.95□□□□□ -2.1
DDX1-205ENST00000470674 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
DDX1-205ENST00000470674 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
DDX1-205ENST00000470674 HYDINQ4G0P3 5121 aa1.9□□□□□ -2.1
DDX1-205ENST00000470674 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
DDX1-205ENST00000470674 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms