RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ACACAQ13085 2346 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 H3BUA1 57 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 KRTAP19-5Q3LI72 72 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 KAAG1Q9UBP8 84 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 LAMA3Q16787 3333 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 TRIOO75962 3097 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 FAM208AQ9UK61 1670 aaKnown RBP-0.21□□□□□ -2.44
SSB-209ENST00000470621 PLECQ15149 4684 aaKnown RBP-0.22□□□□□ -2.44
SSB-209ENST00000470621 ABCC8Q09428 1581 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 ABCA5Q8WWZ7 1642 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 LAMA1P25391 3075 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 H0YGX0 51 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 TFF3Q07654 80 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 DEFB110Q30KQ9 67 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 KRTAP19-6Q3LI70 58 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 MXRA5Q9NR99 2828 aa-0.22□□□□□ -2.44
SSB-209ENST00000470621 CELSR3Q9NYQ7 3312 aa-0.22□□□□□ -2.45
SSB-209ENST00000470621 NFAT5O94916 1531 aa-0.23□□□□□ -2.45
SSB-209ENST00000470621 HIVEP1P15822 2718 aa-0.23□□□□□ -2.45
SSB-209ENST00000470621 UTP20O75691 2785 aaKnown RBP-0.23□□□□□ -2.45
SSB-209ENST00000470621 KRTAP19-8Q3LI54 63 aa-0.23□□□□□ -2.45
SSB-209ENST00000470621 RIF1Q5UIP0 2472 aaKnown RBP-0.23□□□□□ -2.45
SSB-209ENST00000470621 CCDC168Q8NDH2 2452 aa-0.23□□□□□ -2.45
SSB-209ENST00000470621 COL12A1Q99715 3063 aa-0.23□□□□□ -2.45
SSB-209ENST00000470621 MMP24-AS1A0A0U1RRL7 71 aa-0.24□□□□□ -2.45
SSB-209ENST00000470621 PLNP26678 52 aa-0.24□□□□□ -2.45
SSB-209ENST00000470621 WFDC10BQ8IUB3 73 aa-0.24□□□□□ -2.45
SSB-209ENST00000470621 NBEAQ8NFP9 2946 aa-0.24□□□□□ -2.45
SSB-209ENST00000470621 LAMA2P24043 3122 aaKnown RBP-0.25□□□□□ -2.45
SSB-209ENST00000470621 DYNC1H1Q14204 4646 aaKnown RBP-0.25□□□□□ -2.45
SSB-209ENST00000470621 DDX60Q8IY21 1712 aaKnown RBP-0.25□□□□□ -2.45
SSB-209ENST00000470621 A0A0C4DFX4 3053 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 NOP10Q9NPE3 64 aaKnown RBP-0.26□□□□□ -2.45
SSB-209ENST00000470621 CMC2Q9NRP2 79 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 DNAH10Q8IVF4 4471 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 MGAM2Q2M2H8 2515 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 MYO15AQ9UKN7 3530 aa-0.26□□□□□ -2.45
SSB-209ENST00000470621 SMIM27A0A1W2PRY6 76 aa-0.27□□□□□ -2.45
SSB-209ENST00000470621 LINC01546A6NGU7 62 aa-0.27□□□□□ -2.45
SSB-209ENST00000470621 SMR3BP02814 79 aaPredicted RBP-0.27□□□□□ -2.45
SSB-209ENST00000470621 TNP1P09430 55 aa-0.27□□□□□ -2.45
SSB-209ENST00000470621 KRTAP8-1Q8IUC2 63 aa-0.27□□□□□ -2.45
SSB-209ENST00000470621 RELNP78509 3460 aa-0.28□□□□□ -2.45
SSB-209ENST00000470621 TLN2Q9Y4G6 2542 aa-0.28□□□□□ -2.45
SSB-209ENST00000470621 DOPEY1Q5JWR5 2465 aa-0.28□□□□□ -2.45
SSB-209ENST00000470621 M0QY20 66 aa-0.28□□□□□ -2.45
SSB-209ENST00000470621 ABRACLQ9P1F3 81 aa-0.28□□□□□ -2.45
SSB-209ENST00000470621 COL6A5A8TX70 2615 aa-0.29□□□□□ -2.46
SSB-209ENST00000470621 CMYA5Q8N3K9 4069 aa-0.3□□□□□ -2.46
SSB-209ENST00000470621 SNRPGP15A8MWD9 76 aa-0.3□□□□□ -2.46
SSB-209ENST00000470621 DNAH17Q9UFH2 4485 aa-0.3□□□□□ -2.46
SSB-209ENST00000470621 USP9XQ93008 2570 aaPredicted RBP-0.31□□□□□ -2.46
SSB-209ENST00000470621 DNAH5Q8TE73 4624 aa-0.31□□□□□ -2.46
SSB-209ENST00000470621 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
SSB-209ENST00000470621 NIPBLQ6KC79 2804 aaeCLIP-0.32□□□□□ -2.46
SSB-209ENST00000470621 M0QZ58 72 aa-0.32□□□□□ -2.46
SSB-209ENST00000470621 SMIM2Q9BVW6 85 aa-0.32□□□□□ -2.46
SSB-209ENST00000470621 SRCAPQ6ZRS2 3230 aa-0.32□□□□□ -2.46
SSB-209ENST00000470621 ZFHX4Q86UP3 3567 aa-0.33□□□□□ -2.46
SSB-209ENST00000470621 A8MTW9 85 aa-0.33□□□□□ -2.46
SSB-209ENST00000470621 C5orf42Q9H799 3197 aa-0.34□□□□□ -2.46
SSB-209ENST00000470621 MT1HP80294 61 aa-0.34□□□□□ -2.46
SSB-209ENST00000470621 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
SSB-209ENST00000470621 CSMD2Q7Z408 3487 aa-0.34□□□□□ -2.46
SSB-209ENST00000470621 USP9YO00507 2555 aaPredicted RBP-0.34□□□□□ -2.46
SSB-209ENST00000470621 EP400Q96L91 3159 aa-0.35□□□□□ -2.47
SSB-209ENST00000470621 DEFB1P60022 68 aa-0.35□□□□□ -2.47
SSB-209ENST00000470621 CSMD1Q96PZ7 3565 aa-0.35□□□□□ -2.47
SSB-209ENST00000470621 EYSQ5T1H1 3165 aa-0.35□□□□□ -2.47
SSB-209ENST00000470621 FRYQ5TBA9 3013 aa-0.36□□□□□ -2.47
SSB-209ENST00000470621 POLR2KP53803 58 aaKnown RBP-0.36□□□□□ -2.47
SSB-209ENST00000470621 DEFB131AP59861 70 aa-0.36□□□□□ -2.47
SSB-209ENST00000470621 SMG1Q96Q15 3661 aaKnown RBP-0.36□□□□□ -2.47
SSB-209ENST00000470621 CLTCL1P53675 1640 aa-0.36□□□□□ -2.47
SSB-209ENST00000470621 UNC80Q8N2C7 3258 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 DCHS1Q96JQ0 3298 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 TRPM2O94759 1503 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 ITPR1Q14643 2758 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 IQGAP2Q13576 1575 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 ADGRG4Q8IZF6 3080 aa-0.37□□□□□ -2.47
SSB-209ENST00000470621 MGAQ8IWI9 3026 aa-0.38□□□□□ -2.47
SSB-209ENST00000470621 CHD7Q9P2D1 2997 aa-0.38□□□□□ -2.47
SSB-209ENST00000470621 NDUFA1O15239 70 aa-0.38□□□□□ -2.47
SSB-209ENST00000470621 TRRAPQ9Y4A5 3859 aa-0.39□□□□□ -2.47
SSB-209ENST00000470621 SPEGQ15772 3267 aa-0.39□□□□□ -2.47
SSB-209ENST00000470621 BOD1L1Q8NFC6 3051 aa-0.39□□□□□ -2.47
SSB-209ENST00000470621 MT1BP07438 61 aa-0.39□□□□□ -2.47
SSB-209ENST00000470621 DMXL2Q8TDJ6 3036 aa-0.39□□□□□ -2.47
SSB-209ENST00000470621 WDFY4Q6ZS81 3184 aa-0.4□□□□□ -2.47
SSB-209ENST00000470621 SPTAN1Q13813 2472 aaKnown RBP-0.4□□□□□ -2.47
SSB-209ENST00000470621 TEX15Q9BXT5 2789 aa-0.41□□□□□ -2.47
SSB-209ENST00000470621 MYO9AB2RTY4 2548 aa-0.41□□□□□ -2.47
SSB-209ENST00000470621 CEP295Q9C0D2 2601 aa-0.41□□□□□ -2.48
SSB-209ENST00000470621 TLN1Q9Y490 2541 aaKnown RBP-0.41□□□□□ -2.48
SSB-209ENST00000470621 VCANP13611 3396 aa-0.42□□□□□ -2.48
SSB-209ENST00000470621 CRYBG3Q68DQ2 2970 aa-0.42□□□□□ -2.48
SSB-209ENST00000470621 FREM2Q5SZK8 3169 aa-0.42□□□□□ -2.48
SSB-209ENST00000470621 MT1EP04732 61 aa-0.42□□□□□ -2.48
SSB-209ENST00000470621 MT1HL1P0DM35 61 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms