RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 MUC2Q02817 5179 aa7.64□□□□□ -1.19
COL4A5-203ENST00000470339 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
COL4A5-203ENST00000470339 SERP1Q9Y6X1 66 aa7.59□□□□□ -1.19
COL4A5-203ENST00000470339 KRTAP19-2Q3LHN2 52 aa7.56□□□□□ -1.2
COL4A5-203ENST00000470339 COA5Q86WW8 74 aa7.56□□□□□ -1.2
COL4A5-203ENST00000470339 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
COL4A5-203ENST00000470339 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
COL4A5-203ENST00000470339 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
COL4A5-203ENST00000470339 S4R3F8 94 aa7.48□□□□□ -1.21
COL4A5-203ENST00000470339 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.22
COL4A5-203ENST00000470339 LCA10Q71F78 164 aa7.44□□□□□ -1.22
COL4A5-203ENST00000470339 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-203ENST00000470339 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
COL4A5-203ENST00000470339 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
COL4A5-203ENST00000470339 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-203ENST00000470339 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
COL4A5-203ENST00000470339 V9GYY9 64 aa7.29□□□□□ -1.24
COL4A5-203ENST00000470339 MT1HP80294 61 aa7.28□□□□□ -1.24
COL4A5-203ENST00000470339 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
COL4A5-203ENST00000470339 Q1T7F1 81 aa7.27□□□□□ -1.25
COL4A5-203ENST00000470339 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
COL4A5-203ENST00000470339 H0YAA0 97 aa7.22□□□□□ -1.25
COL4A5-203ENST00000470339 M0R2T5 61 aa7.2□□□□□ -1.26
COL4A5-203ENST00000470339 SEC61GP60059 68 aa7.19□□□□□ -1.26
COL4A5-203ENST00000470339 A0A1B0GU69 56 aa7.17□□□□□ -1.26
COL4A5-203ENST00000470339 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
COL4A5-203ENST00000470339 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
COL4A5-203ENST00000470339 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
COL4A5-203ENST00000470339 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-203ENST00000470339 PSPHP1O15172 72 aa7.07□□□□□ -1.28
COL4A5-203ENST00000470339 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
COL4A5-203ENST00000470339 P0C880 135 aa7.04□□□□□ -1.28
COL4A5-203ENST00000470339 Q5VV11 94 aa7.04□□□□□ -1.28
COL4A5-203ENST00000470339 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
COL4A5-203ENST00000470339 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
COL4A5-203ENST00000470339 A0A1B0GU33 70 aa7□□□□□ -1.29
COL4A5-203ENST00000470339 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
COL4A5-203ENST00000470339 MT2AP02795 61 aa6.97□□□□□ -1.29
COL4A5-203ENST00000470339 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
COL4A5-203ENST00000470339 UQCR11O14957 56 aa6.95□□□□□ -1.3
COL4A5-203ENST00000470339 M0QZ58 72 aa6.94□□□□□ -1.3
COL4A5-203ENST00000470339 MT1FP04733 61 aa6.91□□□□□ -1.3
COL4A5-203ENST00000470339 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
COL4A5-203ENST00000470339 A6NED7 52 aa6.89□□□□□ -1.31
COL4A5-203ENST00000470339 R4GN34 69 aa6.89□□□□□ -1.31
COL4A5-203ENST00000470339 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
COL4A5-203ENST00000470339 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
COL4A5-203ENST00000470339 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
COL4A5-203ENST00000470339 H3BS24 57 aa6.82□□□□□ -1.32
COL4A5-203ENST00000470339 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
COL4A5-203ENST00000470339 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
COL4A5-203ENST00000470339 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
COL4A5-203ENST00000470339 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
COL4A5-203ENST00000470339 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
COL4A5-203ENST00000470339 A8MU10 97 aa6.71□□□□□ -1.34
COL4A5-203ENST00000470339 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
COL4A5-203ENST00000470339 A6NN06 94 aa6.7□□□□□ -1.34
COL4A5-203ENST00000470339 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
COL4A5-203ENST00000470339 A0A0D9SG42 100 aa6.69□□□□□ -1.34
COL4A5-203ENST00000470339 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
COL4A5-203ENST00000470339 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
COL4A5-203ENST00000470339 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
COL4A5-203ENST00000470339 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
COL4A5-203ENST00000470339 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
COL4A5-203ENST00000470339 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
COL4A5-203ENST00000470339 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
COL4A5-203ENST00000470339 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
COL4A5-203ENST00000470339 K7ERS5 55 aa6.59□□□□□ -1.35
COL4A5-203ENST00000470339 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
COL4A5-203ENST00000470339 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
COL4A5-203ENST00000470339 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
COL4A5-203ENST00000470339 MT1BP07438 61 aa6.53□□□□□ -1.36
COL4A5-203ENST00000470339 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
COL4A5-203ENST00000470339 USH2AO75445 5202 aa6.47□□□□□ -1.37
COL4A5-203ENST00000470339 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
COL4A5-203ENST00000470339 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
COL4A5-203ENST00000470339 SSPOA2VEC9 5147 aa6.4□□□□□ -1.39
COL4A5-203ENST00000470339 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
COL4A5-203ENST00000470339 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
COL4A5-203ENST00000470339 MT1XP80297 61 aa6.29□□□□□ -1.4
COL4A5-203ENST00000470339 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
COL4A5-203ENST00000470339 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
COL4A5-203ENST00000470339 ROMO1P60602 79 aa6.27□□□□□ -1.41
COL4A5-203ENST00000470339 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
COL4A5-203ENST00000470339 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
COL4A5-203ENST00000470339 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
COL4A5-203ENST00000470339 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
COL4A5-203ENST00000470339 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
COL4A5-203ENST00000470339 KRTAP4-2Q9BYR5 136 aa6.14□□□□□ -1.43
COL4A5-203ENST00000470339 TNP1P09430 55 aa6.13□□□□□ -1.43
COL4A5-203ENST00000470339 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
COL4A5-203ENST00000470339 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
COL4A5-203ENST00000470339 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
COL4A5-203ENST00000470339 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
COL4A5-203ENST00000470339 KRTAP10-12P60413 245 aa6□□□□□ -1.45
COL4A5-203ENST00000470339 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
COL4A5-203ENST00000470339 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
COL4A5-203ENST00000470339 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
COL4A5-203ENST00000470339 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
COL4A5-203ENST00000470339 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms